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PI0020584 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020584
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr04:30398825..30401208
RNA-Seq ExpressionPI0020584
SyntenyPI0020584
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038783.1 uncharacterized protein E6C27_scaffold92G003370 [Cucumis melo var. makuwa]5.1e-0777.5Show/hide
Query:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
        MVEERAGKEIVELTN PAVVYCP+PDMLPA   P+K++ C
Subjt:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
KGN60270.2 hypothetical protein Csa_001570 [Cucumis sativus]6.3e-1350.42Show/hide
Query:  MVEERAGKEIVELTN--NPAVVYC--PDPDMLPACP------LPLKTIVCWDYFILCTCCLNSTVKHPRNLLATNTETVSNFAGVLGIM----------R
        MVEERAGKEIVEL    +   ++C    P  L   P      LP  T VC DYFIL      +T+KHPRNLLAT+TET  +   + G +          R
Subjt:  MVEERAGKEIVELTN--NPAVVYC--PDPDMLPACP------LPLKTIVCWDYFILCTCCLNSTVKHPRNLLATNTETVSNFAGVLGIM----------R

Query:  ETHCTVGATISEYMAVKGL
         THCTVGATISEYMAVKGL
Subjt:  ETHCTVGATISEYMAVKGL
TYK31403.1 uncharacterized protein E5676_scaffold455G007110 [Cucumis melo var. makuwa]5.1e-0777.5Show/hide
Query:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
        MVEERAGKEIVELTN PAVVYCP+PDMLPA   P+K++ C
Subjt:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
TrEMBL top hitse value%identityAlignment
A0A0A0LGQ8 Uncharacterized protein7.2e-2352.14Show/hide
Query:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACP-------------------------------LPLKTIVCWDYFILCTCCLNSTVKHPRNLLATNTETV
        MVEERAGKEIVELTNNPAVV CP+PDMLPACP                               LP  T VC DYFIL      +T+KHPRNLLAT+TET 
Subjt:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACP-------------------------------LPLKTIVCWDYFILCTCCLNSTVKHPRNLLATNTETV

Query:  SNFAGVLGIM----------RETHCTVGATISEYMAVKGL
         +   + G +          R THCTVGATISEYMAVKGL
Subjt:  SNFAGVLGIM----------RETHCTVGATISEYMAVKGL
A0A5A7T754 SWIM-type domain-containing protein2.5e-0777.5Show/hide
Query:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
        MVEERAGKEIVELTN PAVVYCP+PDMLPA   P+K++ C
Subjt:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
A0A5D3E5J2 SWIM-type domain-containing protein2.5e-0777.5Show/hide
Query:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
        MVEERAGKEIVELTN PAVVYCP+PDMLPA   P+K++ C
Subjt:  MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGAGAGGGCGGGGAAGGAGATAGTCGAGCTCACAAACAATCCTGCTGTTGTCTACTGTCCAGACCCTGACATGCTGCCGGCTTGCCCATTGCCATTGAAAAC
AATTGTTTGTTGGGATTACTTCATTCTGTGTACATGTTGCCTAAACTCAACGGTAAAACATCCACGAAACTTGTTGGCAACAAACACAGAAACTGTCTCAAATTTTGCAG
GGGTACTAGGGATCATGAGGGAAACGCATTGCACCGTGGGGGCTACCATTTCTGAGTACATGGCAGTTAAAGGACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGGAGAGGGCGGGGAAGGAGATAGTCGAGCTCACAAACAATCCTGCTGTTGTCTACTGTCCAGACCCTGACATGCTGCCGGCTTGCCCATTGCCATTGAAAAC
AATTGTTTGTTGGGATTACTTCATTCTGTGTACATGTTGCCTAAACTCAACGGTAAAACATCCACGAAACTTGTTGGCAACAAACACAGAAACTGTCTCAAATTTTGCAG
GGGTACTAGGGATCATGAGGGAAACGCATTGCACCGTGGGGGCTACCATTTCTGAGTACATGGCAGTTAAAGGACTCTAG
Protein sequenceShow/hide protein sequence
MVEERAGKEIVELTNNPAVVYCPDPDMLPACPLPLKTIVCWDYFILCTCCLNSTVKHPRNLLATNTETVSNFAGVLGIMRETHCTVGATISEYMAVKGL