; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020625 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020625
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr08:4880700..4882957
RNA-Seq ExpressionPI0020625
SyntenyPI0020625
Gene Ontology termsGO:0034645 - cellular macromolecule biosynthetic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044271 - cellular nitrogen compound biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEY69982.1 putative RNA-directed DNA polymerase, eukaryota, reverse transcriptase zinc-binding domain protein [Tanacetum cinerariifolium]2.4e-0440.32Show/hide
Query:  STSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEID
        S+ I ++HL YVDD ++F   +   +   + ++N+FY+ SGL +N+SK++L GV  SF+EI+
Subjt:  STSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEID

KAF1892130.1 hypothetical protein Lal_00036486 [Lupinus albus]8.1e-0545.07Show/hide
Query:  MMVSTSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTL
        M+ S +I V+ LQ+VDDT+L   GSD       SV+ LF + SGL +N SK++L GVN   D I+ H + L
Subjt:  MMVSTSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTL

TYK05527.1 eukaryotic translation initiation factor 3 subunit A-like [Cucumis melo var. makuwa]5.6e-0640.91Show/hide
Query:  EVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG---EHGPFTLFQQLLRASCLPSP
        ++ HLQYV DTLLF S  +G L  W  V+ +F + +GL LN  KTSLI  N     +    STLG   ++GP  L   L++  C   P
Subjt:  EVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG---EHGPFTLFQQLLRASCLPSP

XP_010674186.1 PREDICTED: uncharacterized protein LOC104890406 [Beta vulgaris subsp. vulgaris]6.9e-0437.31Show/hide
Query:  TSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTL
        +++++ HLQY DDTL+FC  +   L+    ++ LF + SGL +N  K+SLIG+N S + +    + L
Subjt:  TSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTL

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]5.6e-0643.94Show/hide
Query:  IEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG
        I V+HL+Y DDT++FC    G L  W ++++LF   SGL +N++KTSLIG+N   +E    V  +G
Subjt:  IEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG

TrEMBL top hitse value%identityAlignment
A0A5D3C150 Eukaryotic translation initiation factor 3 subunit A2.7e-0640.91Show/hide
Query:  EVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG---EHGPFTLFQQLLRASCLPSP
        ++ HLQYV DTLLF S  +G L  W  V+ +F + +GL LN  KTSLI  N     +    STLG   ++GP  L   L++  C   P
Subjt:  EVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG---EHGPFTLFQQLLRASCLPSP

A0A699HSU5 Putative RNA-directed DNA polymerase, eukaryota, reverse transcriptase zinc-binding domain protein (Fragment)1.1e-0440.32Show/hide
Query:  STSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEID
        S+ I ++HL YVDD ++F   +   +   + ++N+FY+ SGL +N+SK++L GV  SF+EI+
Subjt:  STSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEID

A0A6A3D446 Reverse transcriptase domain-containing protein4.4e-0437.31Show/hide
Query:  SIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG
        S ++ HLQ+ DD ++FC  S  ++M    V+ +F + SGL LN+ K+SL G+N S +E+    +++G
Subjt:  SIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG

A0A6A5P537 Reverse transcriptase domain-containing protein3.9e-0545.07Show/hide
Query:  MMVSTSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTL
        M+ S +I V+ LQ+VDDT+L   GSD       SV+ LF + SGL +N SK++L GVN   D I+ H + L
Subjt:  MMVSTSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTL

A0A6J1E196 uncharacterized protein LOC1110250192.7e-0643.94Show/hide
Query:  IEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG
        I V+HL+Y DDT++FC    G L  W ++++LF   SGL +N++KTSLIG+N   +E    V  +G
Subjt:  IEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTAAGTACATCGATTGAGGTCGCGCATCTTCAGTATGTGGATGATACCTTACTCTTTTGTTCTGGGAGTGATGGAAAGTTGATGGCTTGGTTGTCTGTTGTCAA
TTTATTCTATATGGAATCGGGTCTTTTCCTAAATGTCTCCAAAACGTCTCTTATTGGAGTTAATCCTAGCTTTGATGAGATTGATTTTCATGTGTCCACTCTTGGTGAAC
ATGGACCATTTACGTTGTTCCAACAACTCCTCAGGGCAAGTTGTCTACCAAGTCCACCTTCCGAAACTTTGACTAAGGTGATGGTGCTATCTAGCACAGCTCCGAAGTTT
GGTTCTAGGCACAGAGCATCGAGTATAGATCAAGAAGAAACTGGGTCAGGCAGAGCTGAGGCATCCCTACATTTACTTGTTGGGAGGGGTTATTTTGTTCAACTTTGGAG
CTCATCCATCTTCCACAAGCACCTCCATTGTCCTCAAACACCTCAGCGTAGATCTGTAGTCCAAGTAGAGTTAAGAAGTTGTGTAGAATCTTCACAGTTCTGCAGAAATT
ATCATCTTCAAAAACTGCCCTTGATATCATACTCACGTCTTCTTTCGAGGGTAGAGCGAAGAAGGAAGATGGAAGAAGGAAAGCGATTGCCTGCAATGAATGTATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGTAAGTACATCGATTGAGGTCGCGCATCTTCAGTATGTGGATGATACCTTACTCTTTTGTTCTGGGAGTGATGGAAAGTTGATGGCTTGGTTGTCTGTTGTCAA
TTTATTCTATATGGAATCGGGTCTTTTCCTAAATGTCTCCAAAACGTCTCTTATTGGAGTTAATCCTAGCTTTGATGAGATTGATTTTCATGTGTCCACTCTTGGTGAAC
ATGGACCATTTACGTTGTTCCAACAACTCCTCAGGGCAAGTTGTCTACCAAGTCCACCTTCCGAAACTTTGACTAAGGTGATGGTGCTATCTAGCACAGCTCCGAAGTTT
GGTTCTAGGCACAGAGCATCGAGTATAGATCAAGAAGAAACTGGGTCAGGCAGAGCTGAGGCATCCCTACATTTACTTGTTGGGAGGGGTTATTTTGTTCAACTTTGGAG
CTCATCCATCTTCCACAAGCACCTCCATTGTCCTCAAACACCTCAGCGTAGATCTGTAGTCCAAGTAGAGTTAAGAAGTTGTGTAGAATCTTCACAGTTCTGCAGAAATT
ATCATCTTCAAAAACTGCCCTTGATATCATACTCACGTCTTCTTTCGAGGGTAGAGCGAAGAAGGAAGATGGAAGAAGGAAAGCGATTGCCTGCAATGAATGTATGTTAA
Protein sequenceShow/hide protein sequence
MMVSTSIEVAHLQYVDDTLLFCSGSDGKLMAWLSVVNLFYMESGLFLNVSKTSLIGVNPSFDEIDFHVSTLGEHGPFTLFQQLLRASCLPSPPSETLTKVMVLSSTAPKF
GSRHRASSIDQEETGSGRAEASLHLLVGRGYFVQLWSSSIFHKHLHCPQTPQRRSVVQVELRSCVESSQFCRNYHLQKLPLISYSRLLSRVERRRKMEEGKRLPAMNVC