; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020637 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020637
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTrihelix transcription factor GTL1 isoform X2
Genome locationchr09:817961..818353
RNA-Seq ExpressionPI0020637
SyntenyPI0020637
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042619.1 trihelix transcription factor GTL1 isoform X2 [Cucumis melo var. makuwa]3.9e-6398.48Show/hide
Query:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGG--GHMVVDDDEADGRSGGGSGGSGGNRWPR
        MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGG  GHMVVDDDEADGRSGGGSGGSGGNRWPR
Subjt:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGG--GHMVVDDDEADGRSGGGSGGSGGNRWPR

Query:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
Subjt:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR

XP_011654662.1 trihelix transcription factor GTL1 isoform X1 [Cucumis sativus]1.3e-6196.97Show/hide
Query:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRL--GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPR
        MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDS QVEAASPISSRPPAVPSSYEELIRL  GGGGG MVVDDDEADGRSGGGSGGSGGNRWPR
Subjt:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRL--GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPR

Query:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
Subjt:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR

XP_011654663.1 trihelix transcription factor GTL1 isoform X2 [Cucumis sativus]1.3e-6196.97Show/hide
Query:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRL--GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPR
        MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDS QVEAASPISSRPPAVPSSYEELIRL  GGGGG MVVDDDEADGRSGGGSGGSGGNRWPR
Subjt:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRL--GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPR

Query:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
Subjt:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR

XP_038874539.1 trihelix transcription factor GTL1-like isoform X1 [Benincasa hispida]4.9e-4280.74Show/hide
Query:  MEPPAPGSGS--GLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSS--YEELIRL-GGGGGHMVVDDDEADGRSGGGSGGSGGNR
        ME  A GSGS  GLPD SQLF V S    PP LT+D TI DSQQVEAASPISSRPPAVPSS  YEELIRL GGGGG MVVDD+EAD RSG   GGSGGNR
Subjt:  MEPPAPGSGS--GLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSS--YEELIRL-GGGGGHMVVDDDEADGRSGGGSGGSGGNR

Query:  WPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        WPRQETLALLKIRSEMDS FRDATLKGPLWDEVSR
Subjt:  WPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

XP_038874540.1 trihelix transcription factor GTL1-like isoform X2 [Benincasa hispida]4.9e-4280.74Show/hide
Query:  MEPPAPGSGS--GLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSS--YEELIRL-GGGGGHMVVDDDEADGRSGGGSGGSGGNR
        ME  A GSGS  GLPD SQLF V S    PP LT+D TI DSQQVEAASPISSRPPAVPSS  YEELIRL GGGGG MVVDD+EAD RSG   GGSGGNR
Subjt:  MEPPAPGSGS--GLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSS--YEELIRL-GGGGGHMVVDDDEADGRSGGGSGGSGGNR

Query:  WPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        WPRQETLALLKIRSEMDS FRDATLKGPLWDEVSR
Subjt:  WPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

TrEMBL top hitse value%identityAlignment
A0A5A7TMN2 Trihelix transcription factor GTL1 isoform X21.9e-6398.48Show/hide
Query:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGG--GHMVVDDDEADGRSGGGSGGSGGNRWPR
        MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGG  GHMVVDDDEADGRSGGGSGGSGGNRWPR
Subjt:  MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGG--GHMVVDDDEADGRSGGGSGGSGGNRWPR

Query:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        QETLALLKIRSEMDSVFRDATLKGPLWDEVSR
Subjt:  QETLALLKIRSEMDSVFRDATLKGPLWDEVSR

A0A6J1ELD6 trihelix transcription factor GTL1-like isoform X11.6e-3068.7Show/hide
Query:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDD-----EADGRSG-GGSGGSGGNRWPRQ
        G GSG    S+LF V       PSLTVD  +SDSQ VEAASPISSRPPA  S +YEELIR   GGG M +DDD     +A G SG GG GGS GNRWPRQ
Subjt:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDD-----EADGRSG-GGSGGSGGNRWPRQ

Query:  ETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        ETLALLKIRS+MDS FRDATLKGPLWDEVSR
Subjt:  ETLALLKIRSEMDSVFRDATLKGPLWDEVSR

A0A6J1EQK5 trihelix transcription factor GTL1-like isoform X21.6e-3068.7Show/hide
Query:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDD-----EADGRSG-GGSGGSGGNRWPRQ
        G GSG    S+LF V       PSLTVD  +SDSQ VEAASPISSRPPA  S +YEELIR   GGG M +DDD     +A G SG GG GGS GNRWPRQ
Subjt:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDD-----EADGRSG-GGSGGSGGNRWPRQ

Query:  ETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        ETLALLKIRS+MDS FRDATLKGPLWDEVSR
Subjt:  ETLALLKIRSEMDSVFRDATLKGPLWDEVSR

A0A6J1I2L2 trihelix transcription factor GTL1-like isoform X15.5e-3169.6Show/hide
Query:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALL
        G GSG    S+LF V  TPP    LTV+  +SDSQ VEAASPISSRPPA  S +YEELIR   GGG M +DDD   G   GG GGS GNRWPRQETLALL
Subjt:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALL

Query:  KIRSEMDSVFRDATLKGPLWDEVSR
        KIRS+MDS FRDATLKGPLWDEVSR
Subjt:  KIRSEMDSVFRDATLKGPLWDEVSR

A0A6J1I499 trihelix transcription factor GTL1-like isoform X25.5e-3169.6Show/hide
Query:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALL
        G GSG    S+LF V  TPP    LTV+  +SDSQ VEAASPISSRPPA  S +YEELIR   GGG M +DDD   G   GG GGS GNRWPRQETLALL
Subjt:  GSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALL

Query:  KIRSEMDSVFRDATLKGPLWDEVSR
        KIRS+MDS FRDATLKGPLWDEVSR
Subjt:  KIRSEMDSVFRDATLKGPLWDEVSR

SwissProt top hitse value%identityAlignment
Q39117 Trihelix transcription factor GT-22.7e-1460.94Show/hide
Query:  GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        GGG G  V ++ +      G   GSGGNRWPR ETLALL+IRSEMD  FRD+TLK PLW+E+SR
Subjt:  GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

Q9C6K3 Trihelix transcription factor DF18.5e-1380.49Show/hide
Query:  GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        G GGNRWPRQETLALLKIRS+M   FRDA++KGPLW+EVSR
Subjt:  GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

Q9C882 Trihelix transcription factor GTL12.1e-1957Show/hide
Query:  SQQVEAASPISSRPPAVPSSYEELIR---------LGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        ++ VE ASPISSRPPA  ++ EEL+R         LGGGGG          G  GG +  S GNRWPR+ETLALL+IRS+MDS FRDATLK PLW+ VSR
Subjt:  SQQVEAASPISSRPPAVPSSYEELIR---------LGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

Q9LZS0 Trihelix transcription factor PTL2.0e-0940.31Show/hide
Query:  PGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISD----SQQVEAASPISSRPPAVPSSYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQET
        P + S  P     F +    PPP  L   TT  D     + +      SS   A  +S       GGG G     D    G   GG GG G  RWPRQET
Subjt:  PGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISD----SQQVEAASPISSRPPAVPSSYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQET

Query:  LALLKIRSEMDSVFRDATLKGPLWDEVSR
        L LL+IRS +D  F++A  KGPLWDEVSR
Subjt:  LALLKIRSEMDSVFRDATLKGPLWDEVSR

Arabidopsis top hitse value%identityAlignment
AT1G33240.1 GT-2-like 11.5e-2057Show/hide
Query:  SQQVEAASPISSRPPAVPSSYEELIR---------LGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        ++ VE ASPISSRPPA  ++ EEL+R         LGGGGG          G  GG +  S GNRWPR+ETLALL+IRS+MDS FRDATLK PLW+ VSR
Subjt:  SQQVEAASPISSRPPAVPSSYEELIR---------LGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

AT1G76880.1 Duplicated homeodomain-like superfamily protein6.1e-1480.49Show/hide
Query:  GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        G GGNRWPRQETLALLKIRS+M   FRDA++KGPLW+EVSR
Subjt:  GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

AT1G76890.2 Duplicated homeodomain-like superfamily protein1.9e-1560.94Show/hide
Query:  GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        GGG G  V ++ +      G   GSGGNRWPR ETLALL+IRSEMD  FRD+TLK PLW+E+SR
Subjt:  GGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

AT3G10000.1 Homeodomain-like superfamily protein2.4e-1050.77Show/hide
Query:  GGGHMVVDDDEADGRSGGGSG---GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR
        G     +   ++ G  GG SG   G G  RWPRQETL LL++RS +D  F++A  KGPLWDEVSR
Subjt:  GGGHMVVDDDEADGRSGGGSG---GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

AT5G03680.1 Duplicated homeodomain-like superfamily protein1.4e-1040.31Show/hide
Query:  PGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISD----SQQVEAASPISSRPPAVPSSYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQET
        P + S  P     F +    PPP  L   TT  D     + +      SS   A  +S       GGG G     D    G   GG GG G  RWPRQET
Subjt:  PGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISD----SQQVEAASPISSRPPAVPSSYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQET

Query:  LALLKIRSEMDSVFRDATLKGPLWDEVSR
        L LL+IRS +D  F++A  KGPLWDEVSR
Subjt:  LALLKIRSEMDSVFRDATLKGPLWDEVSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCACCCGCTCCTGGATCTGGATCAGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCCTTAACTGTTGATACCACTAT
AAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCAATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTTGGCGGCGGCGGTGGTCACATGG
TGGTTGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGCGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAG
ATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCTCTTTGGGATGAAGTCTCCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCACCCGCTCCTGGATCTGGATCAGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCCTTAACTGTTGATACCACTAT
AAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCAATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTTGGCGGCGGCGGTGGTCACATGG
TGGTTGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGCGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAG
ATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCTCTTTGGGATGAAGTCTCCAGGTAA
Protein sequenceShow/hide protein sequence
MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGGGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSE
MDSVFRDATLKGPLWDEVSR