CuGenDBv2

Gene ID	PI0020648
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	chr06:21847596..21848605
RNA-Seq Expression	PI0020648
Synteny	PI0020648
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

1.6e-67

45.99

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+K+D +K LE+NL+EF +  +DL+NIGEK+ DE + IILLNSL +
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYG+DSLTM I++ AL++R+LE KK   KDGE+    G+S KK+ KG     +  +N       G+ +K F  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      KI +  +  +T Y+               WI DSG +YHMT NR+ L +FQ+ + G +L+G +  C+VKG GSV +   DG IR +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SGYT K ENG+MK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa]

5.0e-69

47.48

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NLDEF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYG DSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++GK +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  +T Y+               WI+DSG ++HMT +R+ L +FQ+++ G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]

5.3e-71

47.77

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NLDEF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYGRDSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++GK +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  +T Y+               WI+DSG ++HMT +R+ L +FQ+++ G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

TYK10877.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

2.1e-67

46.59

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR  ++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NL EF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYGRDSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++ K +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  KT Y+               WI+D G ++HMT +++ L +FQ+ + G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]

5.3e-71

47.77

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NLDEF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYGRDSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++GK +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  +T Y+               WI+DSG ++HMT +R+ L +FQ+++ G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class

2.4e-69

47.48

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NLDEF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYG DSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++GK +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  +T Y+               WI+DSG ++HMT +R+ L +FQ+++ G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

A0A5A7UB25 Putative gag-pol polyprotein

2.6e-71

47.77

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NLDEF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYGRDSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++GK +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  +T Y+               WI+DSG ++HMT +R+ L +FQ+++ G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.8e-68

45.99

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+K+D +K LE+NL+EF +  +DL+NIGEK+ DE + IILLNSL +
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYG+DSLTM I++ AL++R+LE KK   KDGE+    G+S KK+ KG     +  +N       G+ +K F  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      KI +  +  +T Y+               WI DSG +YHMT NR+ L +FQ+ + G +L+G +  C+VKG GSV +   DG IR +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SGYT K ENG+MK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

A0A5D3CFX6 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.0e-67

46.59

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR  ++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NL EF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYGRDSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++ K +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  KT Y+               WI+D G ++HMT +++ L +FQ+ + G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

A0A5D3DNU1 Putative gag-pol polyprotein

2.6e-71

47.77

Show/hide

Query:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE
        M E+AY+TI+LYL D VLR V++  TT E+WKKL  +YLTKSL NK+ +KEKFFG+KMD +K LE+NLDEF +  +DL+NIGEK+ DE +A+ILLNSL E
Subjt:  MKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSE

Query:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------
        +Y E+K  IKYGRDSLTM I++ AL++R+LE KK   KDGE+    G+S+KKS KG       +    RSK++GK +KCF  HKE H +K          
Subjt:  SYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRK----------

Query:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI
                      +I +  +  +T Y+               WI+DSG ++HMT +R+ L +FQ+++ G +L+G +  C VKG GSVQ+   DG +R +
Subjt:  --------------KIFELKNKRKTEYKK-------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTI

Query:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          VRYVP LKR+L+SLG  D+SG T K ENGVMK+ K
Subjt:  EQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.9e-25

26.18

Show/hide

Query:  NFARMKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLN
        ++A + E A + I L+L D+V+  +  + T + +W +L  +Y++K+LTNKL LK++ +   M    +   +L+ FN     L+N+G K+++E KAI+LLN
Subjt:  NFARMKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLN

Query:  SLSESYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFT--CGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRKKI-F
        SL  SY+ +   I +G+ ++ ++ + SAL   + + +K     G+   T   G+S ++SS      G    ++ RSK+  +V+ C+  ++  H ++    
Subjt:  SLSESYNEIKNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFT--CGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRKKI-F

Query:  ELKNKRKTEYKK---------------------------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQI
          K K +T  +K                                 +W++D+  S+H T  R+L   +   + GT+ +G+    K+ GIG + ++   G  
Subjt:  ELKNKRKTEYKK---------------------------------DWIIDSGYSYHMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQI

Query:  RTIEQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK
          ++ VR+VP+L+ +L+S    D+ GY     N   ++ K
Subjt:  RTIEQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

AGGAATTTTGCTAGGATGAAAGAAATAGCCTACAACACCATAATTTTGTACTTGGTTGATAATGTCTTACGTCAAGTGAATAAACAGATCACTACAAAAGAGGTATGGAA
AAAATTATATGAAATTTACCTCACAAAATCCTTAACGAATAAACTAAATCTTAAGGAAAAGTTCTTTGGCTTTAAAATGGATACTACTAAGGATCTTGAACAGAATCTGG
ATGAATTTAATAGAACCACTATTGATCTAAGCAACATAGGGGAAAAGCTAGATGATGAAATCAAGGCTATCATATTGCTTAACTCACTGTCCGAATCCTACAATGAAATT
AAGAATGTTATTAAATATGGTAGAGATAGCTTGACTATGGAGATTATGGTGAGTGCTCTAAGGTCACGTGATCTAGAGTCAAAGAAAACAGGTTCAAAAGATGGTGAAGT
TCACTTCACTTGTGGAAAATCCAAAAAGAAAAGTTCAAAGGGAAGCAGTAGCCAAGGTAAATCTGAAAATAACAGGGAAAGATCGAAAACTCAGGGTAAAGTCAAGAAGT
GCTTCTACTACCATAAGGAAAGGCACATTCGCAAAAAAATTTTTGAACTGAAAAACAAGAGAAAAACAGAATATAAGAAGGATTGGATCATTGACTCAGGTTACTCGTAT
CACATGACACGAAATCGTAACTTGCTTCAAGATTTTCAACAACTAAATGAAGGAACGATCCTCATTGGTAGTCACTTTGAATGCAAAGTGAAAGGAATTGGATCAGTACA
AGTCAGAATGTTTGATGGCCAAATCAGAACAATTGAACAAGTTCGATATGTACCTAATTTAAAGAGAAGCTTACTTTCTCTTGGAGTGTTTGATAAATCAGGATATACCT
GCAAGATTGAGAATGGAGTGATGAAAATTATAAAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

RNFARMKEIAYNTIILYLVDNVLRQVNKQITTKEVWKKLYEIYLTKSLTNKLNLKEKFFGFKMDTTKDLEQNLDEFNRTTIDLSNIGEKLDDEIKAIILLNSLSESYNEI
KNVIKYGRDSLTMEIMVSALRSRDLESKKTGSKDGEVHFTCGKSKKKSSKGSSSQGKSENNRERSKTQGKVKKCFYYHKERHIRKKIFELKNKRKTEYKKDWIIDSGYSY
HMTRNRNLLQDFQQLNEGTILIGSHFECKVKGIGSVQVRMFDGQIRTIEQVRYVPNLKRSLLSLGVFDKSGYTCKIENGVMKIIK

PI0020648 (gene) of Melon (PI 482460) v1 genome