; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020649 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020649
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLa-related protein 6A
Genome locationchr04:1180592..1186070
RNA-Seq ExpressionPI0020649
SyntenyPI0020649
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005844 - polysome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR006630 - La-type HTH domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034878 - Plant La-related protein, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052548.1 la-related protein 6A [Cucumis melo var. makuwa]8.8e-14289.23Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVT
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDKNSSGRI DQNGPDKNIP RVT
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVT

Query:  DQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        DQNGDEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Subjt:  DQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

TYK13277.1 la-related protein 6A [Cucumis melo var. makuwa]7.7e-14697.07Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGPDKNIP RVTDQNGDEEI NVVNEHHD VPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        GDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

XP_004134576.1 la-related protein 6A [Cucumis sativus]5.0e-14596.34Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        M+KLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEEN+KRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRI DQNGPDKNIPGRVTDQNG+EEI NVVNEHHDDVPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        GDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

XP_008439642.1 PREDICTED: la-related protein 6A [Cucumis melo]1.5e-14496.34Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKS+K DVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGP+KNIP RVTDQNGDEEI NVVNEHHD VPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        GDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

XP_038882123.1 la-related protein 6A [Benincasa hispida]8.0e-14395.2Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT DHSFITAALRESSVLV+SSNGKKVKRLHPI LPETRDPKLFTILVENLPEDHSEENIKRIFG AGRIRSITICDPHVV+KLGKSSKGDVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKH+SKHGQRKQHWRGP+PDKNS+GRITDQ+GPDKNIPGR TDQNGDEEI N VNEHHDDVPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ
        GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTS HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ

TrEMBL top hitse value%identityAlignment
A0A0A0KI36 Uncharacterized protein2.4e-14596.34Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        M+KLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEEN+KRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRI DQNGPDKNIPGRVTDQNG+EEI NVVNEHHDDVPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        GDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

A0A1S3AYU2 la-related protein 6A7.0e-14596.34Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKS+K DVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGP+KNIP RVTDQNGDEEI NVVNEHHD VPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        GDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

A0A5A7UBI5 La-related protein 6A4.3e-14289.23Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVT
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDKNSSGRI DQNGPDKNIP RVT
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVT

Query:  DQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        DQNGDEEI NVVNEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Subjt:  DQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

A0A5D3CMV4 La-related protein 6A3.7e-14697.07Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLTHD SFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRI DQNGPDKNIP RVTDQNGDEEI NVVNEHHD VPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
        GDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

A0A6J1EHU6 la-related protein 6A isoform X27.1e-12987.13Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT DHSFI AALRESSVLVVS NGKKVKRLHPI LPETRDPKLFTILVENLPEDHSEENI+RIFG AGRI+SITICDPHVV+K GKSSKG VLISNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        LHALVEYETLEASEKAVATLNDEQDWRNGMRVKP KH+ KHGQ+KQHWR  +PDKN +GR+TD + PDKN  GR TDQN DEEIQN + EHH+DVPDEEE
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQS
        GDHQHKDKH HRGRNQGRTRRQKYKGVN MGHGTTTS HHIEL KPPPGPKMPDGTRGFTMGRGRPPTSNQS
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQS

SwissProt top hitse value%identityAlignment
O80567 La-related protein 6B2.4e-2531.55Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKSSKGD-
        +K + +++S + A L+ S+ L VS +GKKV+R+ PI+     + +   I+ ENLPEDH  +N+ +IF   G +++I  C P             ++K D 
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKSSKGD-

Query:  VLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHD
         L SNK+HA VEYE +E +E+AV  L++  +WR+G++V+  LKH +K           EP K   GR   + G D ++     D    E  Q  + +  D
Subjt:  VLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHD

Query:  DVPDEEE--------GDHQHKDKHG------HRGRNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL------------------SKPPPG
        D   E +        G+ Q  +K        +RGR +GR R Q ++              N  G G     HH ++                   + PPG
Subjt:  DVPDEEE--------GDHQHKDKHG------HRGRNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL------------------SKPPPG

Query:  PKMPDGTRGFTMGRGRP
        P+MPDGTRGF+MGRG+P
Subjt:  PKMPDGTRGFTMGRGRP

Q05CL8 La-related protein 72.1e-0836.07Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT D   I  AL+ SSV+ +   G +++R  P+     +D +  T+ VE LP++ +   I+R+FG  G +  I+I  PH        S GD     K
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLND
          A VE+ET E + KA+  LN+
Subjt:  LHALVEYETLEASEKAVATLND

Q5XI01 La-related protein 72.1e-0836.07Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT D   I  AL+ SSV+ +   G +++R  P+     +D +  T+ VE LP++ +   I+R+FG  G +  I+I  PH        S GD     K
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLND
          A VE+ET E + KA+  LN+
Subjt:  LHALVEYETLEASEKAVATLND

Q94A38 La-related protein 6A5.0e-7153.74Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE
        LHA VEYET+EA+EKA ATLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   + T ++ +  +      HH D P ++
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE

Query:  EGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS
        +G +  KDK+G++GR  G+ RRQ ++G NG+GHGT +S+ H     +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Subjt:  EGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS

Q9LHL3 La-related protein 6C1.3e-3136.52Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        +K LT +H  ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS +N+++IFGV G +++I IC  H  +      KGD L+SNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        +HAL+EY+    ++KAV  LNDE++WR G+RV+ L   S     K         +N  G + D   P        + ++G++  +  + E   D     +
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGH----------GTTTSTHHIELSKP---PPGPKMPDGTRGFTMGRGRPPTS
        GD  +      +GR +GR R  +   V G G           G  +   H E S P     GP+MPDGTRGFTMGRG+P  S
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGH----------GTTTSTHHIELSKP---PPGPKMPDGTRGFTMGRGRPPTS

Arabidopsis top hitse value%identityAlignment
AT2G43970.1 RNA-binding protein1.7e-2631.55Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKSSKGD-
        +K + +++S + A L+ S+ L VS +GKKV+R+ PI+     + +   I+ ENLPEDH  +N+ +IF   G +++I  C P             ++K D 
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKSSKGD-

Query:  VLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHD
         L SNK+HA VEYE +E +E+AV  L++  +WR+G++V+  LKH +K           EP K   GR   + G D ++     D    E  Q  + +  D
Subjt:  VLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHD

Query:  DVPDEEE--------GDHQHKDKHG------HRGRNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL------------------SKPPPG
        D   E +        G+ Q  +K        +RGR +GR R Q ++              N  G G     HH ++                   + PPG
Subjt:  DVPDEEE--------GDHQHKDKHG------HRGRNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL------------------SKPPPG

Query:  PKMPDGTRGFTMGRGRP
        P+MPDGTRGF+MGRG+P
Subjt:  PKMPDGTRGFTMGRGRP

AT3G19090.1 RNA-binding protein9.4e-3336.52Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        +K LT +H  ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS +N+++IFGV G +++I IC  H  +      KGD L+SNK
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE
        +HAL+EY+    ++KAV  LNDE++WR G+RV+ L   S     K         +N  G + D   P        + ++G++  +  + E   D     +
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEE

Query:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGH----------GTTTSTHHIELSKP---PPGPKMPDGTRGFTMGRGRPPTS
        GD  +      +GR +GR R  +   V G G           G  +   H E S P     GP+MPDGTRGFTMGRG+P  S
Subjt:  GDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGH----------GTTTSTHHIELSKP---PPGPKMPDGTRGFTMGRGRPPTS

AT5G46250.1 RNA-binding protein3.5e-7253.74Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE
        LHA VEYET+EA+EKA ATLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   + T ++ +  +      HH D P ++
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE

Query:  EGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS
        +G +  KDK+G++GR  G+ RRQ ++G NG+GHGT +S+ H     +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Subjt:  EGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSTHH-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS

AT5G46250.2 RNA-binding protein4.2e-4953.96Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE
        LHA VEYET+EA+EKA ATLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R        E QN    H D+  D+ 
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE

Query:  EG
        +G
Subjt:  EG

AT5G46250.3 RNA-binding protein4.2e-4953.96Show/hide
Query:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK
        MKKLT DH+ I +AL+ESS LVVS++ KKVKRL P  LPE RDPK+FT+LVENLPEDHS ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +
Subjt:  MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNK

Query:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE
        LHA VEYET+EA+EKAV TLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R        E QN    H D+  D+ 
Subjt:  LHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEE

Query:  EG
        +G
Subjt:  EG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAACTTACACACGATCATTCATTTATCACTGCTGCACTGAGGGAGTCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTC
ATTGCCTGAGACTAGGGATCCTAAGTTATTTACCATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAACGAATTTTTGGAGTGGCTGGACGCATAA
GAAGTATCACCATTTGTGACCCACATGTCGTAGACAAGTTGGGGAAAAGCAGCAAGGGTGATGTGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGAGACTCTG
GAGGCTTCTGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTAAGCATGGCCAGAGGAAACAACA
TTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAACTGACCAGAATGGTCCTGACAAGAACATACCTGGGCGAGTAACTGATCAGAACGGTGATGAAGAAA
TTCAGAACGTTGTAAATGAGCATCATGACGATGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCGAAATCAAGGACGAACTAGA
AGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACTCATCACATTGAACTTTCGAAGCCACCCCCTGGTCCAAAAATGCCTGATGGAACTCG
GGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAA
mRNA sequenceShow/hide mRNA sequence
CGGCGATTGACTCCTAGAAATTGCGGGCAAAACATGAAATTCAAAAGCCCTTAACGAAAAGGTGAAATGTTCAAATTACCCTCAACAATGGAGGGTGTTGTCGGCTATTG
ATATAAAATGGTCCGCGCAAGAACTCATTGAAGTTAGGAGAAACGGAGGGCGTGAAGGTACTTTGTGTTCTTACCGCCTAACGCTTTTCTCCTCCTCACCATGGCCGGCG
ATGAGCCTCCGACTAAGTCCTCAACCGCCGCCGTCTCTTCCTATGTCGCCGACTCCATCCTCTCGCCCCCACATCAAGATCCCGTCGGATCACCCAGTCACGATGTGCCG
GAGATTCATCATTGATATCCGAAGACGATCATGACCAGGGATCCAGGGAGAATCACGATCACGGCCACGAACCCGCGGTTAGAGCCGCTGTTCTCCCTGAGGATCTGAAA
CAAAGGATTGTTAAGCAGGTTGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGTTCCTATAGC
TATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCATTCATTTATCACTGCTGCACTGAGGGAGTCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAG
TCAAGCGACTCCATCCTATTTCATTGCCTGAGACTAGGGATCCTAAGTTATTTACCATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAACGAATT
TTTGGAGTGGCTGGACGCATAAGAAGTATCACCATTTGTGACCCACATGTCGTAGACAAGTTGGGGAAAAGCAGCAAGGGTGATGTGCTGATCAGTAATAAGTTGCATGC
TCTAGTGGAGTATGAGACTCTGGAGGCTTCTGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTA
AGCATGGCCAGAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAACTGACCAGAATGGTCCTGACAAGAACATACCTGGGCGAGTAACT
GATCAGAACGGTGATGAAGAAATTCAGAACGTTGTAAATGAGCATCATGACGATGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGG
TCGAAATCAAGGACGAACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACTCATCACATTGAACTTTCGAAGCCACCCCCTGGTC
CAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAATGATAATTTCATCAAAATGGGTCTGTAGAAATTTAA
CTTTCTATGTTTTTTACTTTGATTGATGGGCATGCTAGAACGCGTCCTGGTATATGTCCAAGTAGTTTGGCCAAAATGTATCTAACCTCAAAAGATTTGTGTCTCGAGAA
AATGTTATCTTGTATATTGTTCACTTGTATGCTATGTTTAAATTTGGTGGTTTTGAATTTTTCAACCGAGTCTAATTAAAAATCAAACATTTATTTTAAAATATGAAAAC
TGTTTATTTAGTTCAATAGGGTGGGGAATTTGAAATAGTAATCCTTTTGTAGAGTA
Protein sequenceShow/hide protein sequence
MKKLTHDHSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETL
EASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRITDQNGPDKNIPGRVTDQNGDEEIQNVVNEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTR
RQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI