; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020654 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020654
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionribosome maturation protein SBDS
Genome locationchr03:21561767..21564858
RNA-Seq ExpressionPI0020654
SyntenyPI0020654
Gene Ontology termsGO:0042256 - mature ribosome assembly (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002140 - Ribosome maturation protein Sdo1/SBDS
IPR013087 - Zinc finger C2H2-type
IPR018023 - Ribosome maturation protein SBDS, conserved site
IPR018978 - Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR019783 - Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR036236 - Zinc finger C2H2 superfamily
IPR036786 - Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR037188 - Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR039100 - Ribosome maturation protein Sdo1/SBDS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146781.1 ribosome maturation protein SBDS [Cucumis sativus]1.0e-19395.26Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYSNVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFA+DPNHSSKKQALEVIHELQK FPIKRSPMRLRYIVPEQNVPSLLDKLNAW ASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC
        S+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDD ENVEL PRQLKE++S IPQLSE LQKQTIS+NS+NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC

Query:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGD TKFREH+KSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_008466694.1 PREDICTED: ribosome maturation protein SBDS [Cucumis melo]2.3e-19897.77Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAW ASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDD ENVELLPRQLKE+ES+IPQLSE LQKQTISVNS+NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC

Query:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGDATKFREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_022936066.1 ribosome maturation protein SBDS [Cucurbita moschata]1.1e-18491.11Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLN+W ASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKSEWHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_023535044.1 ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo]1.9e-18491.39Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLNAW ASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR
        SND SGNQQRSIICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKSEWHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

XP_038886377.1 ribosome maturation protein SBDS [Benincasa hispida]8.5e-19394.99Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQTEICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RYIVPEQN PSLLDKLNAW ASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSEL GRFEVLSFCLHEEGDTNVDQY+DD ENVEL PRQ+KESESAIPQL+E LQKQTISVNSENA KEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC

Query:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNV VGDAT+FREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGD+ESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

TrEMBL top hitse value%identityAlignment
A0A0A0KIY6 C2H2-type domain-containing protein4.8e-19495.26Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVE+DLDEVLQSQIVYSNVSKGVLAKTK+LKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMR+IHFA+DPNHSSKKQALEVIHELQK FPIKRSPMRLRYIVPEQNVPSLLDKLNAW ASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC
        S+DQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDD ENVEL PRQLKE++S IPQLSE LQKQTIS+NS+NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC

Query:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGD TKFREH+KSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A1S3CRW0 ribosome maturation protein SBDS1.1e-19897.77Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAW ASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDD ENVELLPRQLKE+ES+IPQLSE LQKQTISVNS+NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC

Query:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGDATKFREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A5A7UXA4 Ribosome maturation protein SBDS1.1e-19897.77Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAW ASIV
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC
        SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDD ENVELLPRQLKE+ES+IPQLSE LQKQTISVNS+NAPKEGKRC
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRC

Query:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        STCNVAVGDATKFREHHKS+WHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
Subjt:  STCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A6J1F6G6 ribosome maturation protein SBDS5.4e-18591.11Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLN+W ASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKSEWHKHNVKRKTKNLPPLTEEEC VE+AMGDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

A0A6J1IK36 ribosome maturation protein SBDS1.6e-18490.56Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAF TDDQ EICLKILKEGELQ+AGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY VPEQN PSLLDKLN+W ASI+
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR
        SNDQSGNQQRS+ICELDPSFYRDCNPLMSEL G+FEVLSFCLHEEGDTNVDQY +DD ENVEL PR +KESESAIPQLSE LQKQ ISV+  N  KEGKR
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQY-EDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKR

Query:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
        CSTCNV VGDA +FREHHKSEWHKHN+KRKTKNLPPLTEEEC VE+A+GDSESDLKEYSF
Subjt:  CSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

SwissProt top hitse value%identityAlignment
P70122 Ribosome maturation protein SBDS2.0e-6755.47Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
         S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q3SWZ6 Ribosome maturation protein SBDS7.5e-6755.47Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++  G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q5RAZ2 Ribosome maturation protein SBDS1.4e-6554.66Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH+++  N S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++  G  EVL+    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q5RK30 Ribosome maturation protein SBDS4.4e-6755.06Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MRLR+++P      L +KL      + S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
         S  QQ  I+C +DP  +R+ + L+   ++  G  EVLS    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Q9Y3A5 Ribosome maturation protein SBDS1.4e-6554.66Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE
        S+  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVSKG +AK +DL +AFGTDDQTEIC +IL +GE+QV+ KER 
Subjt:  SLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKERE

Query:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND
         QL   FRDIATIV  K  NPETKRPYT+ +IER M++IH+++  N S+K+QALEVI +L+++  I+R+ MRLR+I+P      L +KL      I S D
Subjt:  AQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSND

Query:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD
            QQ  I+C +DP  +R+ + L+   ++  G  EVL+    EEGD
Subjt:  QSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEGD

Arabidopsis top hitse value%identityAlignment
AT1G43860.1 sequence-specific DNA binding transcription factors1.2e-12861.99Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK
        MS++LVQP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYSNVSKGVLAK+KDL  +FG+DD T+IC+ IL++GELQVAGK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGK

Query:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV
        ERE+Q S+QFRDIATIVMQKT NPET+RPYTISM+ERLM EIHFA+DP+ +SKKQAL+VI ELQK FPIKRSPMRLR  VP QN PSLL+KL  W  S+V
Subjt:  EREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIV

Query:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCE-----NVELLP--RQLKESESAIPQLSEGLQKQTISVNSE--
        S D+SG Q  S +CE++P  +R+C+  +  + GR E+L+  +H EGDT++D Y++  +     +  LLP   + K+    + +LS+ LQKQ IS      
Subjt:  SNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCE-----NVELLP--RQLKESESAIPQLSEGLQKQTISVNSE--

Query:  ---NAPKEGKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF
              K+G +CSTCN  VG+A ++REH KS+WHKHN+KRKT+ LPP++ +EC  E+ M DS +DLK+YSF
Subjt:  ---NAPKEGKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF

AT2G24500.1 Zinc finger protein 6224.1e-0442.86Show/hide
Query:  GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE
        G  C++CN    D  + + H+KSEWH++N+KRK   +P +TE
Subjt:  GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE

AT4G31420.1 Zinc finger protein 6225.4e-0440.48Show/hide
Query:  GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE
        G  C+ CN+   D  +   H+KS+WH++N+KRK   +P +TE
Subjt:  GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE

AT4G31420.2 Zinc finger protein 6225.4e-0440.48Show/hide
Query:  GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE
        G  C+ CN+   D  +   H+KS+WH++N+KRK   +P +TE
Subjt:  GKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKTKNLPPLTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCGATCGCTGGTGCAGCCGATCGGGCAGAAACGCCTGACCAACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAA
GGTCCTTTCATGGCGTTCTGGCGTGGAGAAAGATTTGGATGAGGTTTTGCAATCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGA
AAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTT
CGTGATATCGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTATTGA
TCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAGCTCCAGAAACAGTTCCCAATTAAACGGTCACCTATGAGGTTACGATATATCGTACCCGAACAAA
ACGTCCCATCTCTCCTTGATAAATTAAATGCTTGGGGTGCTAGTATCGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATTATTTGTGAATTGGATCCTAGCTTT
TATCGAGACTGTAATCCATTAATGAGTGAACTACATGGAAGATTTGAAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGAGGACGATTG
TGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAATCGGAATCGGCTATTCCTCAGCTAAGTGAAGGTTTACAAAAGCAGACAATCTCTGTCAACAGTGAGAACGCCC
CAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGGGATGCTACAAAGTTTAGAGAGCATCACAAGAGTGAGTGGCATAAACATAATGTCAAGCGCAAAACC
AAGAATCTTCCACCTCTGACCGAAGAGGAGTGCACGGTAGAATTGGCAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
GTAGATTTAAAATTGGAATAGTTTGTATTTTGTAGAAGGCTGGAGAGGCAAACATTGTAAGTAAACCCCGTTAAGCATATATATATATAAACCAAGTGGAGGGACAAACC
TCCGTTGTAATATCAGTATTATCATCGTTTCCCTTTTTAATCCAATCGCCAAACTTTAACGAAGATGTCCCGATCGCTGGTGCAGCCGATCGGGCAGAAACGCCTGACCA
ACGTCGCCGTGGTTCGTTTGAAGAAACATGGTCTTCGCTTCGAGATTGCCTGTTACAAGAACAAGGTCCTTTCATGGCGTTCTGGCGTGGAGAAAGATTTGGATGAGGTT
TTGCAATCGCAAATTGTTTATTCGAATGTTTCAAAAGGAGTTCTTGCAAAAACAAAAGATTTGAAAGCAGCTTTTGGTACAGATGATCAGACGGAAATTTGTTTGAAGAT
TCTTAAAGAAGGGGAACTTCAAGTTGCAGGGAAGGAGAGGGAGGCTCAATTATCCAATCAGTTTCGTGATATCGCAACTATTGTTATGCAGAAGACCTTCAATCCTGAAA
CTAAACGCCCTTACACCATTAGCATGATTGAGCGACTAATGCGTGAAATTCATTTTGCTATTGATCCAAATCACAGCTCAAAGAAACAGGCACTAGAGGTTATTCATGAG
CTCCAGAAACAGTTCCCAATTAAACGGTCACCTATGAGGTTACGATATATCGTACCCGAACAAAACGTCCCATCTCTCCTTGATAAATTAAATGCTTGGGGTGCTAGTAT
CGTTTCCAATGACCAGTCTGGAAATCAGCAACGAAGCATTATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCATTAATGAGTGAACTACATGGAAGATTTG
AAGTTCTCTCTTTTTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGAGGACGATTGTGAGAATGTGGAACTGCTACCAAGGCAATTAAAGGAATCGGAATCG
GCTATTCCTCAGCTAAGTGAAGGTTTACAAAAGCAGACAATCTCTGTCAACAGTGAGAACGCCCCAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGCCGTGGGGGA
TGCTACAAAGTTTAGAGAGCATCACAAGAGTGAGTGGCATAAACATAATGTCAAGCGCAAAACCAAGAATCTTCCACCTCTGACCGAAGAGGAGTGCACGGTAGAATTGG
CAATGGGTGATTCAGAGTCTGACCTGAAGGAGTATTCATTTTGAACCACCTGTCATGTTATGCTTTGTTGAATAGCTGTGAGGTTTTTGTTCTTCAGTTTTGGTGTGGAA
ACAATACTATCATTGGCTAGTTGTAACTTACACTTGTTTGACGTTCTCAACATGTCACGCATCGTGTAATGATCTCAGTTTCATAGTTTTGACATTTTAGTGCTTTATGG
TCGCGTTGTAAATCAATTCCGTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQF
RDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIVPEQNVPSLLDKLNAWGASIVSNDQSGNQQRSIICELDPSF
YRDCNPLMSELHGRFEVLSFCLHEEGDTNVDQYEDDCENVELLPRQLKESESAIPQLSEGLQKQTISVNSENAPKEGKRCSTCNVAVGDATKFREHHKSEWHKHNVKRKT
KNLPPLTEEECTVELAMGDSESDLKEYSF