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PI0020709 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020709
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosomal protein S24/S35, mitochondrial
Genome locationchr12:1395165..1396979
RNA-Seq ExpressionPI0020709
SyntenyPI0020709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019929.1 hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-5274.85Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSV---FTLRCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI
        MKRA+WGAVF  CSR +S+SP L+T RSGPLL  FSV      RCYSSGNDKYNGLNSTT  NKDSLVDDD+S EELKRKID+FY EGD +SLPAIFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSV---FTLRCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI

Query:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEEDGRM
        LKRKLSGKH DAD+ELMKEIRQ+MPGE+EDFK EEYDSDLS EL +SDEEM + S    SEEED R+
Subjt:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEEDGRM

XP_004137486.1 uncharacterized protein LOC101216147 [Cucumis sativus]3.2e-5983.44Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL
        MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYN LNST NKDSLVDDDVSTEELKRKIDKFYE GDADSLPAIFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL

Query:  SGKHEDADNELMKEIRQQMPGEIEDFKG-EEYDSDLSELTKSDEEMGDSSDAS-DSEEEDGRM
        SGKHEDAD+ELMKEIRQQ+PGE+EDFKG EEYDSDL +         DSSDAS DSEEED R+
Subjt:  SGKHEDADNELMKEIRQQMPGEIEDFKG-EEYDSDLSELTKSDEEMGDSSDAS-DSEEEDGRM

XP_008461340.1 PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]1.3e-6384.47Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPPLRTFRS PLLSPFSVFTLRCYSSGNDKYN LNST NKDSLVDDDVSTEELKRKIDKFYE GDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL

Query:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM
        SGKHEDAD+ELMKEIRQ+MPGEIEDFKGEEYDS+L++             ASDSEEED R+
Subjt:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM

XP_023519890.1 uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]5.9e-5374.25Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTL---RCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI
        MKRA+WGAVF VCSR +S+SP L+T RSGPLL PFSV      RCYS+GNDKYNGLNSTT  NKDSLVDDDVS EELKRKID+FY EGD +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTL---RCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI

Query:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEEDGRM
        LKRKLSGKH DAD+ELMKEIRQ+MPGE+EDFK EEYDSDLS EL ++DEEM    +   SEEED R+
Subjt:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEEDGRM

XP_038894045.1 uncharacterized protein LOC120082798 [Benincasa hispida]8.5e-6080.75Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL
        MKRAL GAVFNV SRTLSVSPPLRTFRSG LLSPFS F+LR YSSGNDKYNGLNST NKDSL++DDVSTEELKRKIDKFY EGD +SLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL

Query:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM
        SGKHED D+E+MKEIRQ+MPG++ED  GEEYDSDLSEL ++ EEM D SD+SDSE+ED R+
Subjt:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM

TrEMBL top hitse value%identityAlignment
A0A0A0LT17 Uncharacterized protein1.6e-5983.44Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL
        MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYN LNST NKDSLVDDDVSTEELKRKIDKFYE GDADSLPAIFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL

Query:  SGKHEDADNELMKEIRQQMPGEIEDFKG-EEYDSDLSELTKSDEEMGDSSDAS-DSEEEDGRM
        SGKHEDAD+ELMKEIRQQ+PGE+EDFKG EEYDSDL +         DSSDAS DSEEED R+
Subjt:  SGKHEDADNELMKEIRQQMPGEIEDFKG-EEYDSDLSELTKSDEEMGDSSDAS-DSEEEDGRM

A0A1S3CEX3 uncharacterized protein LOC1034999296.1e-6484.47Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPPLRTFRS PLLSPFSVFTLRCYSSGNDKYN LNST NKDSLVDDDVSTEELKRKIDKFYE GDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL

Query:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM
        SGKHEDAD+ELMKEIRQ+MPGEIEDFKGEEYDS+L++             ASDSEEED R+
Subjt:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM

A0A5D3BIA4 Uncharacterized protein6.1e-6484.47Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL
        MKRALWGAVFNVCSRTLSVSPPLRTFRS PLLSPFSVFTLRCYSSGNDKYN LNST NKDSLVDDDVSTEELKRKIDKFYE GDADSLP IFEAILKRKL
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKL

Query:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM
        SGKHEDAD+ELMKEIRQ+MPGEIEDFKGEEYDS+L++             ASDSEEED R+
Subjt:  SGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM

A0A6J1E804 uncharacterized protein LOC1114315721.4e-5274.25Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSV---FTLRCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI
        MKRA+WGAVF  CSR +S+SP L+T RSGPLL  FSV      RCYSSGNDKYNGLNSTT  NKDSLVDDDVS EELKRKID+FY EGD +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSV---FTLRCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI

Query:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEEDGRM
        LKRKLSGKH DAD+ELMKEIRQ++PGE+EDFK EEYDSDLS EL +SDEEM + S    SEEED R+
Subjt:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEEDGRM

A0A6J1KP40 uncharacterized protein LOC1114952363.9e-5073.17Show/hide
Query:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSV---FTLRCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI
        MKRA+WGAVF  CSR +S+ P L+T RSGPLL PFSV      RCYSSGNDKYNGLNSTT  NKDSLVDD VS EELKRKID+FY EGD +SLP IFEAI
Subjt:  MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSV---FTLRCYSSGNDKYNGLNSTT--NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI

Query:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEED
        LKRKLSGKH DAD+ELMKEI Q+MPGE+EDFK EEYDSDLS +L ++DEEM + S    SEEED
Subjt:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLS-ELTKSDEEMGDSSDASDSEEED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73770.1 FUNCTIONS IN: molecular_function unknown9.5e-0937.74Show/hide
Query:  STTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDS
        S +++    ++ +S EELK++I  F ++G+ D++P +FEA++ RKLSGKH+D+D+E+M  +R+    +    K ++ DSD+       +  GDSSD SD 
Subjt:  STTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDS

Query:  EEEDGR
        E +D R
Subjt:  EEEDGR

AT1G73770.2 FUNCTIONS IN: molecular_function unknown9.5e-0937.74Show/hide
Query:  STTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDS
        S +++    ++ +S EELK++I  F ++G+ D++P +FEA++ RKLSGKH+D+D+E+M  +R+    +    K ++ DSD+       +  GDSSD SD 
Subjt:  STTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDS

Query:  EEEDGR
        E +D R
Subjt:  EEEDGR

AT3G18240.1 Ribosomal protein S24/S35, mitochondrial7.5e-1434.87Show/hide
Query:  NVCSRTLSVSPPL--RTFRSGPLLSPFSVFT---LRCYSSGNDKYNGLNSTT----------NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI
        ++C+R + +SP +  +   + P L+P +       R +SS     +G NSTT           K  LV +DVS +ELK +I+K++ EG+ D+LP + EA+
Subjt:  NVCSRTLSVSPPL--RTFRSGPLLSPFSVFT---LRCYSSGNDKYNGLNSTT----------NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI

Query:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGD
        L+R+L  KH + D+EL+++I + +P + +D K E+++SD  E   +DEE+ D
Subjt:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGD

AT3G18240.2 Ribosomal protein S24/S35, mitochondrial7.5e-1434.87Show/hide
Query:  NVCSRTLSVSPPL--RTFRSGPLLSPFSVFT---LRCYSSGNDKYNGLNSTT----------NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI
        ++C+R + +SP +  +   + P L+P +       R +SS     +G NSTT           K  LV +DVS +ELK +I+K++ EG+ D+LP + EA+
Subjt:  NVCSRTLSVSPPL--RTFRSGPLLSPFSVFT---LRCYSSGNDKYNGLNSTT----------NKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAI

Query:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGD
        L+R+L  KH + D+EL+++I + +P + +D K E+++SD  E   +DEE+ D
Subjt:  LKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGD

AT4G21460.1 Ribosomal protein S24/S35, mitochondrial4.4e-1435.29Show/hide
Query:  GAVF---NVCSRTLSVSPPLRTFRSGPLLSPFSV-----FTLRCYSSGNDKYNGLNS----TTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEA
        GA+F   ++C+R + +S   R   + P L+P +      F      SG +      S    +++K  LV +DVS +ELK +IDK + EG+ D+LP + EA
Subjt:  GAVF---NVCSRTLSVSPPLRTFRSGPLLSPFSV-----FTLRCYSSGNDKYNGLNS----TTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEA

Query:  ILKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGD
        +L+R+L  KH + D+ELM++I + +P + +D K E+++SD  E   +DEE+ D
Subjt:  ILKRKLSGKHEDADNELMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGAGCTCTGTGGGGAGCTGTCTTCAATGTCTGTTCTCGGACGCTTTCCGTCTCTCCTCCGCTACGAACCTTTCGTTCCGGCCCCTTACTGTCTCCATTTTCCGT
TTTCACTTTGCGATGTTACTCATCGGGGAATGACAAGTACAATGGACTGAACTCAACCACAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGA
GGAAAATTGATAAATTTTATGAGGAGGGGGATGCCGATTCATTACCAGCAATTTTTGAAGCAATTTTAAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATAATGAG
CTGATGAAAGAAATTCGACAGCAAATGCCTGGAGAAATTGAAGATTTTAAAGGTGAAGAGTATGATTCAGATTTAAGTGAGTTGACTAAATCTGATGAAGAAATGGGCGA
TTCCAGTGATGCCAGTGATTCTGAGGAAGAAGATGGAAGAATGTAA
mRNA sequenceShow/hide mRNA sequence
AATGAGGCTAAACCCTAAAACTGTAAAGAAACGCCATGAAACGAGCTCTGTGGGGAGCTGTCTTCAATGTCTGTTCTCGGACGCTTTCCGTCTCTCCTCCGCTACGAACC
TTTCGTTCCGGCCCCTTACTGTCTCCATTTTCCGTTTTCACTTTGCGATGTTACTCATCGGGGAATGACAAGTACAATGGACTGAACTCAACCACAAACAAGGACTCTCT
CGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTATGAGGAGGGGGATGCCGATTCATTACCAGCAATTTTTGAAGCAATTTTAAAAAGGA
AGCTATCGGGTAAACACGAAGATGCTGATAATGAGCTGATGAAAGAAATTCGACAGCAAATGCCTGGAGAAATTGAAGATTTTAAAGGTGAAGAGTATGATTCAGATTTA
AGTGAGTTGACTAAATCTGATGAAGAAATGGGCGATTCCAGTGATGCCAGTGATTCTGAGGAAGAAGATGGAAGAATGTAAGATAATGCTAATTTTATAGCTGTAATGTT
CGATTTTATGTTTTCGGTGAATTTTTTTTCAACTTTTAGGGTCTTTTGACCCTAACTTCAATTGGATGGAGTGGACTTTTTTAGTCAATAATTTTACCTATTATAATTAT
AATTAATAATAAGATTATTATTTAAAATCTTTTGTTAAAA
Protein sequenceShow/hide protein sequence
MKRALWGAVFNVCSRTLSVSPPLRTFRSGPLLSPFSVFTLRCYSSGNDKYNGLNSTTNKDSLVDDDVSTEELKRKIDKFYEEGDADSLPAIFEAILKRKLSGKHEDADNE
LMKEIRQQMPGEIEDFKGEEYDSDLSELTKSDEEMGDSSDASDSEEEDGRM