CuGenDBv2

Gene ID	PI0020755
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	transcription factor RAX3-like
Genome location	chr03:768737..769147
RNA-Seq Expression	PI0020755
Synteny	PI0020755
Gene Ontology terms	NA
InterPro domains	IPR001005 - SANT/Myb domain IPR009057 - Homeobox-like domain superfamily IPR017930 - Myb domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008444511.1 PREDICTED: transcription factor RAX3-like [Cucumis melo]

1.3e-44

95.6

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

XP_022962257.1 transcription factor RAX3-like isoform X1 [Cucurbita moschata]

3.3e-45

96.7

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+V  LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

XP_022996950.1 transcription factor RAX3-like isoform X1 [Cucurbita maxima]

3.3e-45

96.7

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+V  LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

XP_022996951.1 transcription factor RAX3-like isoform X2 [Cucurbita maxima]

1.3e-44

95.6

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

XP_038886326.1 transcription factor RAX3-like isoform X1 [Benincasa hispida]

3.3e-45

96.7

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+V  LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKH5 HTH myb-type domain-containing protein

6.2e-45

95.6

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

A0A6J1HC82 transcription factor RAX3-like isoform X1

1.6e-45

96.7

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+V  LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

A0A6J1HEB2 transcription factor RAX3-like isoform X2

6.2e-45

95.6

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

A0A6J1K654 transcription factor RAX3-like isoform X2

6.2e-45

95.6

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

A0A6J1K871 transcription factor RAX3-like isoform X1

1.6e-45

96.7

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQK+V  LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

SwissProt top hits

e value

%identity

Alignment

F4JSU0 Transcription factor MYB87

2.0e-40

80.22

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDK  VKKGPWS EEDA LKSYIEKHGTG NWI+LPQ++   +KRCGKSCRLRWLNYLRPN+KHGGF++EED IICSLY++IGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

Q9FG68 Transcription factor RAX1

7.0e-38

76.92

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDK  VK+GPWSPEED+KL+ YIEK+G GGNWI+ P K    L+RCGKSCRLRWLNYLRPNIKHG FSEEEDRII SL+ +IGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

Q9FKL2 Transcription factor MYB36

2.9e-44

89.01

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEED KLK YI+K+GTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRII SLY+SIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

Q9M2Y9 Transcription factor RAX3

3.8e-44

89.01

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIE  GTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEE+ IICSLY++IGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

Q9SJL7 Transcription factor RAX2

3.4e-40

82.42

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVK+GPWSPEEDAKLK YIEK GTGGNWIALP K    L+RCGKSCRLRWLNYLRPNI+HG F+EEED II SL+ SIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

Arabidopsis top hits

e value

%identity

Alignment

AT2G36890.1 Duplicated homeodomain-like superfamily protein

2.4e-41

82.42

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVK+GPWSPEEDAKLK YIEK GTGGNWIALP K    L+RCGKSCRLRWLNYLRPNI+HG F+EEED II SL+ SIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

AT3G49690.1 myb domain protein 84

2.7e-45

89.01

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLKSYIE  GTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEE+ IICSLY++IGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

AT4G37780.1 myb domain protein 87

1.4e-41

80.22

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDK  VKKGPWS EEDA LKSYIEKHGTG NWI+LPQ++   +KRCGKSCRLRWLNYLRPN+KHGGF++EED IICSLY++IGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

AT5G57620.1 myb domain protein 36

2.1e-45

89.01

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Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEED KLK YI+K+GTGGNWIALPQK+   LKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRII SLY+SIGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

AT5G65790.1 myb domain protein 68

6.1e-45

87.91

Show/hide

Query:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR
        MGRAPCCDKANVKKGPWSPEEDAKLK YIE  GTGGNWIALPQK+   L+RCGKSCRLRWLNYLRPNIKHGGFSEEED IIC+LYV+IGSR
Subjt:  MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

Sequences

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CDS sequence

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ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAATGTTAAGAAAGGGCCATGGTCTCCTGAAGAAGATGCAAAACTCAAGTCTTATATTGAAAAACATGGAACTGGTGGTAA
TTGGATTGCTTTGCCTCAAAAATTGGTAAAAAGACTTAAGAGATGTGGGAAAAGCTGTAGGTTGAGATGGTTGAATTATCTTCGTCCAAATATTAAGCATGGAGGTTTCT
CTGAAGAAGAAGACAGAATCATTTGTAGTCTCTATGTTAGTATTGGAAGCAGGTAA

mRNA sequence

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Protein sequence

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MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKLVKRLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSR

PI0020755 (gene) of Melon (PI 482460) v1 genome