; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020789 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020789
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr12:16461166..16462457
RNA-Seq ExpressionPI0020789
SyntenyPI0020789
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139505.1 LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus]2.8e-15193.86Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGD
        MLIHDLN NHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQ  PK PN PSHHYQFLKSNVD+LHLIQIGITLSDS GNLPDLGTGD
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGD

Query:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFF
        TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLPK+LE+F+GVVR+FF
Subjt:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFF

Query:  GDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        GDNVYDMKYLMRFCQSLYGGLDR+AK MNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV  EMHKHAGVLYGLEVF
Subjt:  GDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

XP_008463638.1 PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis melo]4.0e-15092.88Show/hide
Query:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL
        MLIHDLNINH+S    IQIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQTKPKFPN PS+HYQFLKSNVDVLHLIQIGITLSDS GNLPDL
Subjt:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPK LEEF+GVV
Subjt:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVV

Query:  RVFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        RVFFGDNVYDMKY+MRFCQSLYGGLDR+AK MNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV NEMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]3.9e-12981.23Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKF-PNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTG
        M++ DL  N K IQIREVWASNLESEF LIRDLIDQFPCVSMDTEFPGV+F    KP    N+PS HY+ LKSNVD L+LIQIGITLSDS GNLPDLGTG
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKF-PNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTG

Query:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVF
         +RFIWEFNF DFDVARD+HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVK+LT++ LP  LEEF+GV+RVF
Subjt:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDR+AKI+NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FV N + KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]1.4e-12679.29Show/hide
Query:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKP--KFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLG
        M+ HDLN NH KSI+IREVWASNLESEF+LIRDLID FPCVSMDTEFPG++F   T P        S HY+ LKSNVD L+LIQIGITLSDS GNLPDLG
Subjt:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKP--KFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLG

Query:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVR
        T D+RFIWEFNF DFD+ARD++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDF YL+KILTQ+ LP  L+EF+GV+R
Subjt:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVR

Query:  VFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        V FGDNVYD+KY+MRFC+SLYGGLDR+AK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV NE+ KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]7.8e-13885.61Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKP-KFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTG
        M+IHDLNIN+KSI+IREVWASNLESEF+LIRDLIDQFPCVSMDTEFPG++F    +P  F +QPS HY+ LKSNVD LHLIQIGITLSDS GNLPDLGT 
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKP-KFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTG

Query:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVF
        DTRFIWEFNF DFDVARDLHAP+SIELLRRQGIDF+RNR EGIDSSRFAELMMSSGLVCN SVSWVTFHSAYDFGYLVKILTQ++LP  ++EF+GV+RVF
Subjt:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        FGDNVYDMKYLMRFC+SLYGGLDR+AKI+NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FV NEM KHAGVLYGLEVF
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease1.3e-15193.86Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGD
        MLIHDLN NHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQ  PK PN PSHHYQFLKSNVD+LHLIQIGITLSDS GNLPDLGTGD
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGD

Query:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFF
        TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLPK+LE+F+GVVR+FF
Subjt:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFF

Query:  GDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        GDNVYDMKYLMRFCQSLYGGLDR+AK MNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV  EMHKHAGVLYGLEVF
Subjt:  GDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

A0A1S3CJQ2 Poly(A)-specific ribonuclease1.9e-15092.88Show/hide
Query:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL
        MLIHDLNINH+S    IQIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQTKPKFPN PS+HYQFLKSNVDVLHLIQIGITLSDS GNLPDL
Subjt:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPK LEEF+GVV
Subjt:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVV

Query:  RVFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        RVFFGDNVYDMKY+MRFCQSLYGGLDR+AK MNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV NEMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

A0A5A7T1W0 Poly(A)-specific ribonuclease1.9e-15092.88Show/hide
Query:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL
        MLIHDLNINH+S    IQIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQTKPKFPN PS+HYQFLKSNVDVLHLIQIGITLSDS GNLPDL
Subjt:  MLIHDLNINHKS----IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL

Query:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVV
        GTGDTRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPK LEEF+GVV
Subjt:  GTGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVV

Query:  RVFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        RVFFGDNVYDMKY+MRFCQSLYGGLDR+AK MNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV NEMHKHAGVLYGLEVF
Subjt:  RVFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

A0A6J1CN71 Poly(A)-specific ribonuclease1.9e-12981.23Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKF-PNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTG
        M++ DL  N K IQIREVWASNLESEF LIRDLIDQFPCVSMDTEFPGV+F    KP    N+PS HY+ LKSNVD L+LIQIGITLSDS GNLPDLGTG
Subjt:  MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKF-PNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTG

Query:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVF
         +RFIWEFNF DFDVARD+HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVK+LT++ LP  LEEF+GV+RVF
Subjt:  DTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDR+AKI+NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FV N + KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

A0A6J1HU54 Poly(A)-specific ribonuclease6.7e-12778.93Show/hide
Query:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKP--KFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLG
        M+ HDLN NH KSI+IREVWASNLESEF+LIRDLID FPCVSMDTEFPG++F   T P        S HY+ LKSNVD L+LIQIGITLSDS GNLPDLG
Subjt:  MLIHDLNINH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKP--KFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLG

Query:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVR
        T D+RFIWEFNF DFD+ARD++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDF YL+KILTQ++LP  ++EF+GV+R
Subjt:  TGDTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVR

Query:  VFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        V FGDNVYD+KY+MRFC+SLYGGLDR+AK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV NE+ KHAGVLYGLE F
Subjt:  VFFGDNVYDMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 115.7e-10769.66Show/hide
Query:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL-GTGDTRFIWEFNFKD
        I IR+VWA NLESEF LIR +++ +P +SMDTEFPGVI+           P++ Y  LKSNVD L LIQ+G+TLSD+ GNLPDL G  + R+IWEFNF+D
Subjt:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL-GTGDTRFIWEFNFKD

Query:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVYDMKYLM
        FDV RD HAP+SIELLRR GIDF+RNR EG++S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILT+++LP  L EF+G++R FFGD VYD+K++M
Subjt:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVYDMKYLM

Query:  RFC-QSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        RFC Q LYGGLDRVA+ + VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV +   KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.2e-7553.16Show/hide
Query:  INHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIWEF
        +   SI IREVW  NL  EF LIR+++D+F  ++MDTEFPGV+       K+ N    +Y+ LK NVD+L LIQ+G+T SD +GNLP  GT D   IW+F
Subjt:  INHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIWEF

Query:  NFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVYDM
        NF++F++  D++A  SIELLR+ GIDF +N E+GID  RF ELMMSSG+V N+++SWVTFH  YDFGYLVK+LT ++LP +  +F  ++ V+F   VYD+
Subjt:  NFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVYDM

Query:  KYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        K+LM FC  L+GGL+R+A++M V R VG CHQAGSDSLLT  +F+K+++ +F      K+ GVLYGL V
Subjt:  KYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 92.6e-10468Show/hide
Query:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTR-F
        DL  +  ++  REVWA NLESEF LI ++ID +P +SMDTEFPGVIF  ++  +F N P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R F
Subjt:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTR-F

Query:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDN
        IWEFNF+DFDVARD HAP+SIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILT+++LP  L EF  V+RV FG+ 
Subjt:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDN

Query:  VYDMKYLMRFCQ-SLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        VYD+K++M+FC+  L+GGLDRVA+ + VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FV +   KHAGVLYGLEVF
Subjt:  VYDMKYLMRFCQ-SLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.9e-7953.87Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW
        L +   SIQIREVW  NL+ E  LIRD++D FP V+MDTEFPG++   +    F +   +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +F  ++ V+F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+++ V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.1e-8154.98Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW
        L +   SIQIREVW  NLESE  LIR+++D FP V+MDTEFPG++   +    F     +HY+ LK+NV++L +IQ+G+T SD  GNLP  GT +   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY
        +FNF++FD+  D++A +SIELLR+ GIDF +N E GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP+    F  ++ V+F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A++++V R VG CHQAGSDSLLT   F+K+++ FF+   M K++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-8053.87Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW
        L +   SIQIREVW  NL+ E  LIRD++D FP V+MDTEFPG++   +    F +   +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +F  ++ V+F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+++ V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-8053.87Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW
        L +   SIQIREVW  NL+ E  LIRD++D FP V+MDTEFPG++   +    F +   +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT D   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +F  ++ V+F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+++ V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.7e-8354.98Show/hide
Query:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW
        L +   SIQIREVW  NLESE  LIR+++D FP V+MDTEFPG++   +    F     +HY+ LK+NV++L +IQ+G+T SD  GNLP  GT +   IW
Subjt:  LNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY
        +FNF++FD+  D++A +SIELLR+ GIDF +N E GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP+    F  ++ V+F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A++++V R VG CHQAGSDSLLT   F+K+++ FF+   M K++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-10568Show/hide
Query:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTR-F
        DL  +  ++  REVWA NLESEF LI ++ID +P +SMDTEFPGVIF  ++  +F N P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R F
Subjt:  DLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTR-F

Query:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDN
        IWEFNF+DFDVARD HAP+SIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILT+++LP  L EF  V+RV FG+ 
Subjt:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDN

Query:  VYDMKYLMRFCQ-SLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        VYD+K++M+FC+  L+GGLDRVA+ + VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FV +   KHAGVLYGLEVF
Subjt:  VYDMKYLMRFCQ-SLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-10869.66Show/hide
Query:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL-GTGDTRFIWEFNFKD
        I IR+VWA NLESEF LIR +++ +P +SMDTEFPGVI+           P++ Y  LKSNVD L LIQ+G+TLSD+ GNLPDL G  + R+IWEFNF+D
Subjt:  IQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDL-GTGDTRFIWEFNFKD

Query:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVYDMKYLM
        FDV RD HAP+SIELLRR GIDF+RNR EG++S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILT+++LP  L EF+G++R FFGD VYD+K++M
Subjt:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVYDMKYLM

Query:  RFC-QSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF
        RFC Q LYGGLDRVA+ + VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV +   KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATCCACGATCTTAACATCAACCACAAATCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGAATCTGAATTTCGTTTGATCCGCGATCTCATCGATCAATT
CCCTTGCGTTTCAATGGACACCGAGTTCCCCGGAGTTATTTTCCCCCAACAAACCAAACCCAAATTTCCAAATCAACCCTCCCATCATTACCAATTCCTCAAATCCAACG
TCGACGTCCTCCATCTCATCCAGATCGGAATAACTCTCTCCGATTCTCACGGCAACTTGCCGGATCTCGGCACCGGCGACACCCGATTTATCTGGGAGTTCAACTTTAAG
GACTTTGACGTGGCGCGTGACCTCCACGCTCCCAACTCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCGACAGAAACCGAGAAGAAGGGATCGATTCGTCCCGCTT
CGCGGAGTTGATGATGTCATCGGGACTCGTTTGTAACGAGTCAGTGAGTTGGGTGACGTTTCATAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACACAGCAAA
AGCTTCCGAAAGAGTTAGAAGAATTCATGGGGGTTGTTAGGGTTTTCTTCGGGGATAACGTGTACGATATGAAATACTTGATGCGGTTCTGCCAGAGTCTATACGGCGGT
TTGGACCGGGTTGCAAAAATTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGGTCAGATAGCTTGCTGACGTGGCATGCCTTTCAAAAGATGAGAGATAC
TTTTTTCGTACATAATGAGATGCACAAACATGCTGGTGTTTTGTATGGACTAGAGGTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
TTAATTTTTAAATTATAAAAAAAACGTTTTTGGCAGAACCCAATTTAGACCGAGTCGACTCGCTTACTCTGTGAGTCAAGGACAAATGAAAAATACGCGTTGAATGAAAT
ACTCTCTAACTTTACTCTCTATCCTCCCACTTTCCTTTTATATTCCTTTTCCTTTTTCATTCTCTATATTAATCTCTCCTCTCTTCTTCTTCTTTTCCATCCAAATTCCT
TCAACTCCCTCACTACTTCAATTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTACATCTAATTCATCAGCCATGCTTATCCACGATCTTAACATCAACCACAAATCC
ATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGAATCTGAATTTCGTTTGATCCGCGATCTCATCGATCAATTCCCTTGCGTTTCAATGGACACCGAGTTCCCCGGAGT
TATTTTCCCCCAACAAACCAAACCCAAATTTCCAAATCAACCCTCCCATCATTACCAATTCCTCAAATCCAACGTCGACGTCCTCCATCTCATCCAGATCGGAATAACTC
TCTCCGATTCTCACGGCAACTTGCCGGATCTCGGCACCGGCGACACCCGATTTATCTGGGAGTTCAACTTTAAGGACTTTGACGTGGCGCGTGACCTCCACGCTCCCAAC
TCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCGACAGAAACCGAGAAGAAGGGATCGATTCGTCCCGCTTCGCGGAGTTGATGATGTCATCGGGACTCGTTTGTAA
CGAGTCAGTGAGTTGGGTGACGTTTCATAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACACAGCAAAAGCTTCCGAAAGAGTTAGAAGAATTCATGGGGGTTG
TTAGGGTTTTCTTCGGGGATAACGTGTACGATATGAAATACTTGATGCGGTTCTGCCAGAGTCTATACGGCGGTTTGGACCGGGTTGCAAAAATTATGAATGTGAACCGG
GCGGTTGGAAAGTGCCATCAAGCCGGGTCAGATAGCTTGCTGACGTGGCATGCCTTTCAAAAGATGAGAGATACTTTTTTCGTACATAATGAGATGCACAAACATGCTGG
TGTTTTGTATGGACTAGAGGTCTTCTAATCTAAATGTACAATAAATCAATTTAATTTTAAAATTATATACACATATATTAATTATTTATTTATTTCCTAAATACTTGCCC
CAATTTCCATTTCTTTTTTCTATTTAATTTAATTTATTCAAACCCAAAGTCTGTATGGTAGGATGGGAGTTATAGATGCAGG
Protein sequenceShow/hide protein sequence
MLIHDLNINHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQTKPKFPNQPSHHYQFLKSNVDVLHLIQIGITLSDSHGNLPDLGTGDTRFIWEFNFK
DFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKELEEFMGVVRVFFGDNVYDMKYLMRFCQSLYGG
LDRVAKIMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVHNEMHKHAGVLYGLEVF