; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020801 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020801
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription factor UPBEAT1-like
Genome locationchr09:20134143..20134749
RNA-Seq ExpressionPI0020801
SyntenyPI0020801
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039441.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]2.6e-5093.16Show/hide
Query:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKL
        MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAG RP DSTL CSEVSTKL+ALQSLIPPQSAAGHGQPRQ DELFKDTADYIVVLKTQVVILQKL
Subjt:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKL

Query:  VDFFGSACSDSQNTVVS
        VDFFGSACSDS + VVS
Subjt:  VDFFGSACSDSQNTVVS

KAG6578552.1 hypothetical protein SDJN03_23000, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1859.66Show/hide
Query:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSR---PRDSTLCCS---------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIV
        MS KTNTL N      R  TKRSL  SRRRFHRRH +  R   P ++    S         +VS KL+ALQSLIP QSA G    RQT++LFK+TADYIV
Subjt:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSR---PRDSTLCCS---------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIV

Query:  VLKTQVVILQKLVDFFGSA
        +LKTQVVILQKLVDFFGSA
Subjt:  VLKTQVVILQKLVDFFGSA

KAG7016112.1 hypothetical protein SDJN02_21216, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-1859.66Show/hide
Query:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSR---PRDSTLCCS---------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIV
        MS KTNTL N      R  TKRSL  SRRRFHRRH +  R   P ++    S         +VS KL+ALQSLIP QSA G    RQT++LFK+TADYIV
Subjt:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSR---PRDSTLCCS---------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIV

Query:  VLKTQVVILQKLVDFFGSA
        +LKTQVVILQKLVDFFGSA
Subjt:  VLKTQVVILQKLVDFFGSA

XP_021912135.1 uncharacterized protein LOC110825900 [Carica papaya]2.4e-1141.9Show/hide
Query:  RNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQ
        R  RRRRT+R + H+R        A  RPR     CS++S KL AL++LIP Q+    G+  + ++LF++TADYI++L+TQVV+LQ+L++F+GS   D +
Subjt:  RNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQ

Query:  NTVVS
            +
Subjt:  NTVVS

XP_022993697.1 uncharacterized protein LOC111489609 [Cucurbita maxima]1.5e-1355.26Show/hide
Query:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCS-------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQ
        M+ KT TL N      R RTKRSL  S  R    H  G     S    S       +VS KL+ALQSLIP QSA    + RQT++LFK+TADYIV+LKTQ
Subjt:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCS-------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQ

Query:  VVILQKLVDFFGSA
        VVILQKLVDFFGSA
Subjt:  VVILQKLVDFFGSA

TrEMBL top hitse value%identityAlignment
A0A103YHA6 Uncharacterized protein6.3e-1045.63Show/hide
Query:  PNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSAC
        P  L+N+  R++ R  + S+ R  R H+  S    S    S VS KL+AL++LIP Q   G   P   D+LF++TADYI++L+TQV +LQKLVDF+GS+ 
Subjt:  PNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSAC

Query:  SDS
        S S
Subjt:  SDS

A0A4D9B294 Uncharacterized protein3.7e-1049.48Show/hide
Query:  RTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQNTV
        R KR L++S RR  +R      PR+S    S VS KL AL+ LIP  S  G  +P   D+LF++TADYIV+LKTQV++LQKLVDF+GS   ++++ V
Subjt:  RTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQNTV

A0A4D9BV93 Uncharacterized protein9.8e-1151.55Show/hide
Query:  RTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQNTV
        R KR L++S RR  +R      PR+ST   S VS KL AL+SLIP  S  G  +P   D+LF +TADYIV+LKTQV++LQKLVDF+GS   ++++ V
Subjt:  RTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQNTV

A0A5D3BNP5 Transcription factor UPBEAT1-like1.3e-5093.16Show/hide
Query:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKL
        MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAG RP DSTL CSEVSTKL+ALQSLIPPQSAAGHGQPRQ DELFKDTADYIVVLKTQVVILQKL
Subjt:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKL

Query:  VDFFGSACSDSQNTVVS
        VDFFGSACSDS + VVS
Subjt:  VDFFGSACSDSQNTVVS

A0A6J1JTK8 uncharacterized protein LOC1114896097.2e-1455.26Show/hide
Query:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCS-------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQ
        M+ KT TL N      R RTKRSL  S  R    H  G     S    S       +VS KL+ALQSLIP QSA    + RQT++LFK+TADYIV+LKTQ
Subjt:  MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCS-------EVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQ

Query:  VVILQKLVDFFGSA
        VVILQKLVDFFGSA
Subjt:  VVILQKLVDFFGSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29370.1 unknown protein1.3e-1041.75Show/hide
Query:  RSLTHSRRRFHRRHNAGSRPRDSTLCCSE--------VSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQN
        R+L     R  RR N  SR R    CC          V  KL AL+SL+PP    G G   +T+ELF++TA+YIV L+TQVV+L+KL++ + ++ SD + 
Subjt:  RSLTHSRRRFHRRHNAGSRPRDSTLCCSE--------VSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSDSQN

Query:  TVV
         VV
Subjt:  TVV

AT5G39240.1 unknown protein1.9e-0634.48Show/hide
Query:  LRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQ------------TDELFKDTADYIVVLKTQVVILQK
        +R  + +R++     S++  +RR + G +           S KL AL+SL+PP S     Q RQ            T++LF++TADYIV L+ QVV+LQK
Subjt:  LRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQ------------TDELFKDTADYIVVLKTQVVILQK

Query:  LVDFFGSACSDSQNTV
        L++ +GS+     N V
Subjt:  LVDFFGSACSDSQNTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCTAAAACCAACACACTCCCAAATCCTCTCAGAAATTACCGAAGAAGAAGAACCAAACGATCTTTAACCCATTCTCGCCGTCGCTTCCACCGCCGTCACAATGC
CGGCAGTCGGCCGAGGGATTCGACTCTCTGCTGCTCCGAAGTCTCCACCAAATTGGATGCTCTGCAGAGCCTCATTCCGCCGCAATCCGCCGCTGGACACGGCCAACCAC
GGCAAACGGATGAGTTATTCAAGGACACCGCCGATTACATTGTTGTTTTGAAAACCCAGGTCGTTATTTTGCAGAAGCTGGTTGATTTTTTTGGATCCGCCTGCAGTGAC
TCCCAAAACACCGTCGTTTCATAG
mRNA sequenceShow/hide mRNA sequence
GACCAAATTGGCTCTCACAATGAGCTCTAAAACCAACACACTCCCAAATCCTCTCAGAAATTACCGAAGAAGAAGAACCAAACGATCTTTAACCCATTCTCGCCGTCGCT
TCCACCGCCGTCACAATGCCGGCAGTCGGCCGAGGGATTCGACTCTCTGCTGCTCCGAAGTCTCCACCAAATTGGATGCTCTGCAGAGCCTCATTCCGCCGCAATCCGCC
GCTGGACACGGCCAACCACGGCAAACGGATGAGTTATTCAAGGACACCGCCGATTACATTGTTGTTTTGAAAACCCAGGTCGTTATTTTGCAGAAGCTGGTTGATTTTTT
TGGATCCGCCTGCAGTGACTCCCAAAACACCGTCGTTTCATAGTTCTCTCTTTTTCTTTTTCTTTTTTTCTTTTACTTTCTGTAATTATGAGAGAAAAATAAAATAAAAA
AAATCAAAGAAAATAGATCATTTTGTCTTTTTTCTTCCCTCCTGGTCATGTTAATTTCCTTCTAAGTTTTTTCTTTTAGATTTTATTTTATATATGTGGGATAGGAGTAA
CGTCTAGATCTATAGTAAAAAATTTATATTAATCAAACTATTTTCATTTCGCCCTAA
Protein sequenceShow/hide protein sequence
MSSKTNTLPNPLRNYRRRRTKRSLTHSRRRFHRRHNAGSRPRDSTLCCSEVSTKLDALQSLIPPQSAAGHGQPRQTDELFKDTADYIVVLKTQVVILQKLVDFFGSACSD
SQNTVVS