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PI0020823 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020823
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:17359511..17359675
RNA-Seq ExpressionPI0020823
SyntenyPI0020823
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048587.1 retrotransposon protein [Cucumis melo var. makuwa]7.6e-1372.22Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFS+WELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.9e-1372.22Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MF+DWELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-1374.07Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.6e-1374.07Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

TYK27175.1 retrotransposon protein [Cucumis melo var. makuwa]7.6e-1372.22Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFS+WELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7U2U5 Retrotransposon protein3.7e-1372.22Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFS+WELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

A0A5A7VJX3 Retrotransposon protein1.3e-1374.07Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

A0A5D3BCB2 Retrotransposon protein4.8e-1371.7Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRN
        MTN DIPDD+DE  S++ATT   DIHY+ETSN WS+WRDEL  +MFSDWELRN
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRN

A0A5D3BL48 Putative nuclease HARBI11.3e-1374.07Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

A0A5D3DV38 Retrotransposon protein3.7e-1372.22Show/hide
Query:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ
        MTN DI D++DE +ST+ATT   DIHYIETSN WSQWRD+LA +MFS+WELRNQ
Subjt:  MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGACATACCAGATGACGTTGATGAAGGTAACTCTACATACGCCACCACTAACGATAAAGATATTCATTACATAGAGACCTCGAACGCATGGAGTCAATG
GAGGGACGAGCTTGCCAGAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGACATACCAGATGACGTTGATGAAGGTAACTCTACATACGCCACCACTAACGATAAAGATATTCATTACATAGAGACCTCGAACGCATGGAGTCAATG
GAGGGACGAGCTTGCCAGAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDIPDDVDEGNSTYATTNDKDIHYIETSNAWSQWRDELARKMFSDWELRNQ