CuGenDBv2

Gene ID	PI0020833
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	late embryogenesis abundant protein 1-like
Genome location	chr05:17588360..17590108
RNA-Seq Expression	PI0020833
Synteny	PI0020833
Gene Ontology terms	NA
InterPro domains	IPR039624 - Stress-induced protein KIN1/KIN2

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031971.1 late embryogenesis abundant protein 1 isoform X1 [Cucumis melo var. makuwa]

4.0e-41

95.83

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MSNMQQS NAGQTKGQTQARTEEWMEAT+LGPTSEPRDMSSNSAQAQLCANSAQ STHQ DQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

XP_008460707.2 PREDICTED: late embryogenesis abundant protein 1 isoform X1 [Cucumis melo]

4.0e-41

95.83

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MSNMQQS NAGQTKGQTQARTEEWMEAT+LGPTSEPRDMSSNSAQAQLCANSAQ STHQ DQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

XP_011649123.1 late embryogenesis abundant protein D-7 [Cucumis sativus]

4.9e-39

91.67

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MSNMQQS NAGQTKGQTQ RTEEWMEAT+LGPT+EP DMSSNSAQAQLCANSAQ STHQHDQEP S LQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

XP_016902588.1 PREDICTED: late embryogenesis abundant protein 1 isoform X2 [Cucumis melo]

2.6e-32

90.48

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Query:  TKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        T+ + +ARTEEWMEAT+LGPTSEPRDMSSNSAQAQLCANSAQ STHQ DQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  TKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

XP_023000573.1 late embryogenesis abundant protein 1-like [Cucurbita maxima]

2.1e-21

69.07

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRD-MSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MS+MQQSFNA QT+  +QARTEEWMEAT+    +EPRD + ++SAQ       AQLS H   QEPT+FLQQTGEKMVHMAQ AVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRD-MSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LI39 Uncharacterized protein

2.4e-39

91.67

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MSNMQQS NAGQTKGQTQ RTEEWMEAT+LGPT+EP DMSSNSAQAQLCANSAQ STHQHDQEP S LQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

A0A1S3CCL5 late embryogenesis abundant protein 1 isoform X1

2.0e-41

95.83

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MSNMQQS NAGQTKGQTQARTEEWMEAT+LGPTSEPRDMSSNSAQAQLCANSAQ STHQ DQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

A0A1S4E2Z2 late embryogenesis abundant protein 1 isoform X2

1.3e-32

90.48

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Query:  TKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        T+ + +ARTEEWMEAT+LGPTSEPRDMSSNSAQAQLCANSAQ STHQ DQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  TKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

A0A5A7SQZ2 Late embryogenesis abundant protein 1 isoform X1

2.0e-41

95.83

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MSNMQQS NAGQTKGQTQARTEEWMEAT+LGPTSEPRDMSSNSAQAQLCANSAQ STHQ DQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

A0A6J1KN05 late embryogenesis abundant protein 1-like

1.0e-21

69.07

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Query:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRD-MSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK
        MS+MQQSFNA QT+  +QARTEEWMEAT+    +EPRD + ++SAQ       AQLS H   QEPT+FLQQTGEKMVHMAQ AVDTVKETLGMGDKK
Subjt:  MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRD-MSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related

3.2e-04

32.26

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Query:  SNMQQSFNAGQTKGQTQARTEEWME--ATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGM
        S+ Q S +AG+  GQ Q + EE++   +  +   ++    S +   ++   N+  L +     + +S +QQTG ++ +MAQGA D VK TLGM
Subjt:  SNMQQSFNAGQTKGQTQARTEEWME--ATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGM

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein

1.7e-08

34.58

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Query:  QQSFNAGQTKGQTQARTEEWMEATR----------LGPTSEPRDMSSNSAQAQL-----CANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKET
        QQ FNAGQ +GQ Q + E+W E+ +             T   RD +++  Q+        ++SA  S   + ++      QTGE + +MAQGA+D VK +
Subjt:  QQSFNAGQTKGQTQARTEEWMEATR----------LGPTSEPRDMSSNSAQAQL-----CANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKET

Query:  LGMGDKK
        LGM +KK
Subjt:  LGMGDKK

Sequences

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CDS sequence

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ATGTCTAACATGCAGCAAAGTTTCAATGCTGGCCAAACCAAAGGCCAGACCCAGGCAAGAACAGAAGAATGGATGGAAGCCACCAGATTAGGTCCAACAAGTGAACCAAG
AGACATGTCTAGTAATTCAGCTCAAGCTCAACTTTGTGCTAATTCTGCTCAACTGTCTACTCACCAACATGATCAAGAACCCACTAGTTTTCTCCAACAGACTGGAGAGA
AGATGGTTCACATGGCTCAGGGTGCTGTGGACACAGTGAAGGAAACGCTTGGAATGGGTGACAAGAAATGA

mRNA sequence

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AAAAAAACAAAACAAAAAGTCACCTTAATTAGTTTCACAGCTTCCGATTCAAGTTTCTTATTTTCCAAACCAAAAAAAGAAAGAGAAATATGTCTAACATGCAGCAAAGT
TTCAATGCTGGCCAAACCAAAGGCCAGACCCAGGCAAGAACAGAAGAATGGATGGAAGCCACCAGATTAGGTCCAACAAGTGAACCAAGAGACATGTCTAGTAATTCAGC
TCAAGCTCAACTTTGTGCTAATTCTGCTCAACTGTCTACTCACCAACATGATCAAGAACCCACTAGTTTTCTCCAACAGACTGGAGAGAAGATGGTTCACATGGCTCAGG
GTGCTGTGGACACAGTGAAGGAAACGCTTGGAATGGGTGACAAGAAATGAAGAACAACATTTTTAAAATAATAATTAAAAAATTAAGCAACACTTTGTTAATTTAATTAA
TACCTCTTTATTTATTGATTGATGAATTTTTGTTATTTTTTTTATAGGTTTGTGTCCTATATCTTCATTAGGGCATAGGAAGAACAATTCCTTTGTTTGGAATTTGGATA
CCAATTCCTTTTTTTTTCAATGTAATATAATAAGGCATAGCAAATATTGCAAATGCATAAATGAAAACTCTGCAAGGCTTCATTTTCCC

Protein sequence

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MSNMQQSFNAGQTKGQTQARTEEWMEATRLGPTSEPRDMSSNSAQAQLCANSAQLSTHQHDQEPTSFLQQTGEKMVHMAQGAVDTVKETLGMGDKK

PI0020833 (gene) of Melon (PI 482460) v1 genome