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PI0020842 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020842
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionValyl-tRNA synthetase
Genome locationchr09:4475189..4476159
RNA-Seq ExpressionPI0020842
SyntenyPI0020842
Gene Ontology termsGO:0006438 - valyl-tRNA aminoacylation (biological process)
GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004832 - valine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002303 - Valine-tRNA ligase
IPR009008 - Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EFJ27321.1 hypothetical protein SELMODRAFT_148024 [Selaginella moellendorffii]2.2e-0853.23Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDD
        K  +HPFNGRKLPIICDA+LVD NFGTG+VK+   H       + LVG + +     IL DD
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDD

KAF3610595.1 hypothetical protein DY000_02045316, partial [Brassica cretica]1.7e-0846.67Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG
        K  +HPFNGRKLPIICD ILVDPNFGTG VK+   H       +  VG + +     IL DD +      +D  G
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG

RWV86354.1 hypothetical protein GW17_00051769, partial [Ensete ventricosum]5.8e-0943.04Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQ----DSYMVCYI-LEDDQLKEFGAYNDHW
        K  +HPFNGRKL +ICD   VD  +GTG++KV   ++ L ++ +  +  Q          Y+ LEDDQ K+ G+YNDHW
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQ----DSYMVCYI-LEDDQLKEFGAYNDHW

RZS21730.1 hypothetical protein BHM03_00054407, partial [Ensete ventricosum]5.8e-0943.04Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQ----DSYMVCYI-LEDDQLKEFGAYNDHW
        K  +HPFNGRKL +ICD   VD  +GTG++KV   ++ L ++ +  +  Q          Y+ LEDDQ K+ G+YNDHW
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQ----DSYMVCYI-LEDDQLKEFGAYNDHW

XP_013586637.1 PREDICTED: valine--tRNA ligase [Brassica oleracea var. oleracea]1.7e-0846.67Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG
        K  +HPFNGRKLPIICD ILVDPNFGTG VK+   H       +  VG + +     IL DD +      +D  G
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG

TrEMBL top hitse value%identityAlignment
A0A0D3CA70 Valyl-tRNA synthetase8.2e-0946.67Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG
        K  +HPFNGRKLPIICD ILVDPNFGTG VK+   H       +  VG + +     IL DD +      +D  G
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG

A0A3N6QIC2 Valyl-tRNA synthetase (Fragment)8.2e-0946.67Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG
        K  +HPFNGRKLPIICD ILVDPNFGTG VK+   H       +  VG + +     IL DD +      +D  G
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWG

A0A444CKF7 Uncharacterized protein (Fragment)2.8e-0943.04Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQ----DSYMVCYI-LEDDQLKEFGAYNDHW
        K  +HPFNGRKL +ICD   VD  +GTG++KV   ++ L ++ +  +  Q          Y+ LEDDQ K+ G+YNDHW
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQ----DSYMVCYI-LEDDQLKEFGAYNDHW

D8QWX7 Valyl-tRNA synthetase1.1e-0853.23Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDD
        K  +HPFNGRKLPIICDA+LVD NFGTG+VK+   H       + LVG + +     IL DD
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDD

D8RL11 Valyl-tRNA synthetase1.1e-0853.23Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDD
        K  +HPFNGRKLPIICDA+LVD NFGTG+VK+   H       + LVG + +     IL DD
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDD

SwissProt top hitse value%identityAlignment
O75005 Valine--tRNA ligase6.3e-0635.23Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWGGCKKFKRLRLRLR
        K   HPF  R +PIICD I+VD  FGTG+VK+   H       +  VG + +     I  DD     G  N++ G     KR   R++
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWGGCKKFKRLRLRLR

P07806 Valine--tRNA ligase, mitochondrial1.5e-0435.11Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQL--KEFGAYNDHWGGCKKFKRLRLRLRKRKE
        K   HPF  RK+PII D   VD  FGTG+VK+   H       +   G + +     IL DD L  +E G     W G K+F   +  + + KE
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQL--KEFGAYNDHWGGCKKFKRLRLRLRKRKE

P93736 Valine--tRNA ligase, mitochondrial 12.5e-1075Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH
        K  +HPFNGRKLPIICD ILVDPNFGTG VK+   H
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH

Q54I78 Probable valine--tRNA ligase, mitochondrial1.0e-0350Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH
        K  IHPFN  ++PI+ D ILV+   GTG VK+   H
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH

Q86KU2 Probable valine--tRNA ligase, cytoplasmic7.4e-0761.11Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH
        K  IHP NGRK+PII D++LVD +FGTG VK+   H
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH

Arabidopsis top hitse value%identityAlignment
AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)1.7e-1175Show/hide
Query:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH
        K  +HPFNGRKLPIICD ILVDPNFGTG VK+   H
Subjt:  KICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCATCTTCATGGAAAATTTGTATTCATCCTTTTAATGGAAGGAAGCTTCCTATAATTTGTGATGCAATTCTTGTGGATCCAAATTTTGGAACTGGCTCTGTTAA
GGTGGCTCGAGAACATTTGAGATTGGTCCATCTCAAGGAAACTTTGGTGGGGTCACAGGATTCATACATGGTATGCTACATCTTAGAGGATGATCAACTGAAGGAGTTTG
GTGCTTATAATGATCACTGGGGTGGTTGCAAGAAATTTAAGAGGTTGAGGTTGAGGTTGAGGAAGAGGAAAGAAGTTTCATTTAACACAAGATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCATCTTCATGGAAAATTTGTATTCATCCTTTTAATGGAAGGAAGCTTCCTATAATTTGTGATGCAATTCTTGTGGATCCAAATTTTGGAACTGGCTCTGTTAA
GGTGGCTCGAGAACATTTGAGATTGGTCCATCTCAAGGAAACTTTGGTGGGGTCACAGGATTCATACATGGTATGCTACATCTTAGAGGATGATCAACTGAAGGAGTTTG
GTGCTTATAATGATCACTGGGGTGGTTGCAAGAAATTTAAGAGGTTGAGGTTGAGGTTGAGGAAGAGGAAAGAAGTTTCATTTAACACAAGATCCTGA
Protein sequenceShow/hide protein sequence
MFASSWKICIHPFNGRKLPIICDAILVDPNFGTGSVKVAREHLRLVHLKETLVGSQDSYMVCYILEDDQLKEFGAYNDHWGGCKKFKRLRLRLRKRKEVSFNTRS