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PI0020846 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020846
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr02:12703611..12706552
RNA-Seq ExpressionPI0020846
SyntenyPI0020846
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57762.1 hypothetical protein Csa_009532 [Cucumis sativus]4.6e-2048.67Show/hide
Query:  GGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNR------RGGRGRSEEGSSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRN
        GGML SSYN IK  L+ M +N++EW +D+FG+R      R GRGR +EGS  + T             PHD +ACP++ ET+A+V++DP+SNAYN GWR+
Subjt:  GGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNR------RGGRGRSEEGSSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRN

Query:  HSNFGWGGTGQQN
        H NF WGG  Q +
Subjt:  HSNFGWGGTGQQN

XP_030494694.1 uncharacterized protein LOC115710474 [Cannabis sativa]8.6e-1938.22Show/hide
Query:  NGGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEEGSSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFV-------RNDPFSNAYNPGW
        NG +L  SYN+    L+ + +NN +W        R    R E  +         ++ CV C   H    CP N  +V +V        N+P+SN+YNP W
Subjt:  NGGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEEGSSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFV-------RNDPFSNAYNPGW

Query:  RNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQQQPTTTTPSTSSSMENLLREYMQKNDALLQSQASSIRNLEVQLG
        ++H NF WGG G  + G  G +       F      Q  RPQQ  HQ Q + T     SS+E+L+R+YM KNDA++QSQA+S+RNLEVQLG
Subjt:  RNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQQQPTTTTPSTSSSMENLLREYMQKNDALLQSQASSIRNLEVQLG

XP_038882276.1 uncharacterized protein LOC120073506 [Benincasa hispida]6.0e-2034.1Show/hide
Query:  EGKEGNTRRSALHLGVQMTIW--RTTSTSLCDVDALRDKNGGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEEGSSV--------------
        +G   N     L L +QM  +  R    S   VDA   +  G+++ SY + K  LD +  +N EW +D +  R   R RS+  +SV              
Subjt:  EGKEGNTRRSALHLGVQMTIW--RTTSTSLCDVDALRDKNGGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEEGSSV--------------

Query:  ----------------HTTNQINDMG-----CVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSH
                           NQ+   G     CVGC   H    C  N ++V F++N+PFSN YNPGWRNH NF W    QQ          R G    S 
Subjt:  ----------------HTTNQINDMG-----CVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSH

Query:  VRYQNNRPQQSYHQQQPTTTTPSTSSS---MENLLREYMQKNDALLQSQASSIRNLEVQLG
        V  Q ++       QQP       SSS   +ENLL+EY+ +NDA+L+SQ SSIRNLE+Q+G
Subjt:  VRYQNNRPQQSYHQQQPTTTTPSTSSS---MENLLREYMQKNDALLQSQASSIRNLEVQLG

XP_038902418.1 uncharacterized protein LOC120089063 [Benincasa hispida]2.7e-2032.72Show/hide
Query:  GMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSE-----------------------------------EGSSVHTTNQINDMGCVGCEGPHDT
        G +  +Y + K  LD +  N  +W +D +G R   + ++E                                   + + +    Q+  +GCV C G H  
Subjt:  GMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSE-----------------------------------EGSSVHTTNQINDMGCVGCEGPHDT

Query:  NACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQQQPTTTTPSTS-SSMENLLREYMQKND
        + CPL  + V  ++ + FSN YNPGWR+H NFGWGG   Q    +   G+R     G+  +YQ    Q     QQP+ +T +TS  S+E+LL++YM KND
Subjt:  NACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQQQPTTTTPSTS-SSMENLLREYMQKND

Query:  ALLQSQASSIRNLEVQL
        A++Q+Q SSIRNLE+Q+
Subjt:  ALLQSQASSIRNLEVQL

XP_038902511.1 uncharacterized protein LOC120089170 [Benincasa hispida]6.0e-2033.18Show/hide
Query:  GMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEE-----------------------------------GSSVHTTNQINDMGCVGCEGPHDT
        G +   Y + K  LD ++ N ++W ++ +G R   R ++E                                     +  +T  Q+  + C  C   H  
Subjt:  GMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEE-----------------------------------GSSVHTTNQINDMGCVGCEGPHDT

Query:  NACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQ--GDRRGEAFGSHVRYQNNRPQQSYHQQQPTTTTPST-SSSMENLLREYMQK
          CP N + V  ++N+P++N YNPGWRNH NF WGG   Q  GQ   Q   + RG     H     +  Q      QP+++  ST SSS+E LL++Y++K
Subjt:  NACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQ--GDRRGEAFGSHVRYQNNRPQQSYHQQQPTTTTPST-SSSMENLLREYMQK

Query:  NDALLQSQASSIRNLEVQLG
        NDA++QSQASSIRNLEVQ+G
Subjt:  NDALLQSQASSIRNLEVQLG

TrEMBL top hitse value%identityAlignment
A0A0A0LAQ9 Uncharacterized protein2.2e-2048.67Show/hide
Query:  GGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNR------RGGRGRSEEGSSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRN
        GGML SSYN IK  L+ M +N++EW +D+FG+R      R GRGR +EGS  + T             PHD +ACP++ ET+A+V++DP+SNAYN GWR+
Subjt:  GGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNR------RGGRGRSEEGSSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRN

Query:  HSNFGWGGTGQQN
        H NF WGG  Q +
Subjt:  HSNFGWGGTGQQN

A0A5A7UTC1 Uncharacterized protein1.0e-1757.75Show/hide
Query:  SSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQ
        SSVH    + +M CVGC G ++T+ CP NT+ + + +NDP+SN YN GWRNHSNF WGGTGQ NQG+ G Q
Subjt:  SSVHTTNQINDMGCVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQ

A0A5D3CSC7 Uncharacterized protein9.3e-1941.6Show/hide
Query:  SSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEEG--------------------------------SSVHTTNQINDMGCVGCEGPHDTNACPLNT
        SSYN+I   LD++  NNEEWD+D F + RGGRG++EEG                                SS  +  Q++++GC+    PH  +ACPLN 
Subjt:  SSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEEG--------------------------------SSVHTTNQINDMGCVGCEGPHDTNACPLNT

Query:  ETVAFVRNDPFSNAYNPGWRNHSNF
        E VA+V++DP+SN YNP WRNH NF
Subjt:  ETVAFVRNDPFSNAYNPGWRNHSNF

A0A5D3D2S0 Uncharacterized protein6.0e-1835.98Show/hide
Query:  MLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEE--------------------------------GSSVHTTNQINDMGCVGCEGPHDTNACP
        ML+SSY +IK  LD + NN++E  +DD   +   RGR++                                 G+ V    Q+++M  VGC  PH T+AC 
Subjt:  MLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEE--------------------------------GSSVHTTNQINDMGCVGCEGPHDTNACP

Query:  LNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQ-QQPTTTTPSTSSSMENLLREYMQKNDALLQ
        LN E  A+V++ P+SN YN                         G+ RGEA   H +   +RP  S  Q QQ TT TPS+ SSM  LLR+YMQ+ DA +Q
Subjt:  LNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQ-QQPTTTTPSTSSSMENLLREYMQKNDALLQ

Query:  SQASSIRNLEVQLG
        SQ +SI NLE+ LG
Subjt:  SQASSIRNLEVQLG

A0A6J1DYG0 uncharacterized protein LOC1110257644.3e-1640.29Show/hide
Query:  QINDMGCVGCEGPHDTNACPLNTETVAFV-----RN-DPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQQQPTT
        Q+ND+ C  C   H  + CP N  +V +V     RN +P+SN YNPGWR+H NF W G G  + G + GQ  +  + +    +     PQQ Y+Q+  T 
Subjt:  QINDMGCVGCEGPHDTNACPLNTETVAFV-----RN-DPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQQQPTT

Query:  TTPSTSSSMENLLREYMQKNDALLQSQASSIRNLEVQLG
           + +S++EN+++EYM + DA++QSQA+S+RN E QLG
Subjt:  TTPSTSSSMENLLREYMQKNDALLQSQASSIRNLEVQLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTGGAAACAAACTTCATTCTGGCGTTTTAACTCCGTCATTTACATTCCGAGAGGAATGCTTTTGCACGCAGAAAGAAGGCAAAGAAGGGAATACTAGGCGATC
AGCATTGCATTTAGGCGTTCAAATGACCATCTGGCGAACAACCAGCACATCACTATGCGATGTTGACGCACTAAGAGACAAGAATGGTGGTATGTTAAAAAGCTCCTACA
ACAAGATTAAGGCAGCGCTGGACACAATGGTCAACAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGTCGAGGAGGACGAGGAAGAAGCGAAGAAGGAAGCTCT
GTGCACACGACAAACCAAATTAATGATATGGGATGTGTGGGATGTGAAGGTCCTCATGATACTAACGCATGTCCACTCAACACAGAAACAGTCGCGTTCGTAAGGAACGA
CCCTTTCTCCAACGCTTACAACCCTGGTTGGAGGAACCATTCTAACTTTGGATGGGGAGGAACGGGTCAACAAAATCAAGGACAACATGGTGGTCAAGGTGACCGACGCG
GGGAAGCATTTGGTTCCCACGTGAGGTACCAAAACAATAGACCCCAACAGTCCTATCATCAACAACAACCCACCACCACTACTCCATCCACTTCTTCATCCATGGAGAAC
CTCCTCCGCGAATACATGCAAAAAAATGATGCCCTTCTGCAAAGTCAAGCTTCATCAATCCGCAATCTGGAGGTACAATTAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTGGAAACAAACTTCATTCTGGCGTTTTAACTCCGTCATTTACATTCCGAGAGGAATGCTTTTGCACGCAGAAAGAAGGCAAAGAAGGGAATACTAGGCGATC
AGCATTGCATTTAGGCGTTCAAATGACCATCTGGCGAACAACCAGCACATCACTATGCGATGTTGACGCACTAAGAGACAAGAATGGTGGTATGTTAAAAAGCTCCTACA
ACAAGATTAAGGCAGCGCTGGACACAATGGTCAACAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGTCGAGGAGGACGAGGAAGAAGCGAAGAAGGAAGCTCT
GTGCACACGACAAACCAAATTAATGATATGGGATGTGTGGGATGTGAAGGTCCTCATGATACTAACGCATGTCCACTCAACACAGAAACAGTCGCGTTCGTAAGGAACGA
CCCTTTCTCCAACGCTTACAACCCTGGTTGGAGGAACCATTCTAACTTTGGATGGGGAGGAACGGGTCAACAAAATCAAGGACAACATGGTGGTCAAGGTGACCGACGCG
GGGAAGCATTTGGTTCCCACGTGAGGTACCAAAACAATAGACCCCAACAGTCCTATCATCAACAACAACCCACCACCACTACTCCATCCACTTCTTCATCCATGGAGAAC
CTCCTCCGCGAATACATGCAAAAAAATGATGCCCTTCTGCAAAGTCAAGCTTCATCAATCCGCAATCTGGAGGTACAATTAGGGTAG
Protein sequenceShow/hide protein sequence
MKFGNKLHSGVLTPSFTFREECFCTQKEGKEGNTRRSALHLGVQMTIWRTTSTSLCDVDALRDKNGGMLKSSYNKIKAALDTMVNNNEEWDEDDFGNRRGGRGRSEEGSS
VHTTNQINDMGCVGCEGPHDTNACPLNTETVAFVRNDPFSNAYNPGWRNHSNFGWGGTGQQNQGQHGGQGDRRGEAFGSHVRYQNNRPQQSYHQQQPTTTTPSTSSSMEN
LLREYMQKNDALLQSQASSIRNLEVQLG