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PI0020872 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020872
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:6275347..6275625
RNA-Seq ExpressionPI0020872
SyntenyPI0020872
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037008.1 subtilisin-like protease SBT3.17 isoform X1 [Cucumis melo var. makuwa]2.9e-2165.93Show/hide
Query:  AETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        AE VEVIR+ M+FMN+QLK             DEY AEVVKQLQDIPELSS  +V+ MRII+H+ QDM+AFL IPTELKLEYCT+LLE+NA
Subjt:  AETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

KAA0042340.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-1455.68Show/hide
Query:  ETVEVIRSAMKFMNDQLKD-------------EYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLED
        ETVEVIRSAMKF NDQLK              E  A VVKQLQDIP+L + DR + ++I+ H+V+ ++ FL IPTELKLEYC +LLE+
Subjt:  ETVEVIRSAMKFMNDQLKD-------------EYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLED

KAA0059863.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-2266.3Show/hide
Query:  MAETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        MAETVEVI +AM+F+ND+LK             D+YG + VKQLQDIPEL+S DRVR M+II+H+V DMKAFLRIP ELKLEYCT+LLEDNA
Subjt:  MAETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

KAA0065601.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-1451.11Show/hide
Query:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        ETV++I +A+++ N QLK             D   AEV+ QLQ IP+LS+ DRVR + II+HNV +M+AFL +P ELKL+YCT +LEDNA
Subjt:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

TYK07171.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-1451.11Show/hide
Query:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        ETV++I +A+++ N QLK             D   AEV+ QLQ IP+LS+ DRVR + II+HNV +M+AFL +P ELKL+YCT +LEDNA
Subjt:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

TrEMBL top hitse value%identityAlignment
A0A5A7T2J7 Subtilisin-like protease SBT3.17 isoform X11.4e-2165.93Show/hide
Query:  AETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        AE VEVIR+ M+FMN+QLK             DEY AEVVKQLQDIPELSS  +V+ MRII+H+ QDM+AFL IPTELKLEYCT+LLE+NA
Subjt:  AETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

A0A5A7UV97 Retrotransposon protein7.5e-2366.3Show/hide
Query:  MAETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        MAETVEVI +AM+F+ND+LK             D+YG + VKQLQDIPEL+S DRVR M+II+H+V DMKAFLRIP ELKLEYCT+LLEDNA
Subjt:  MAETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

A0A5A7VIQ2 Retrotransposon protein2.9e-1451.11Show/hide
Query:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        ETV++I +A+++ N QLK             D   AEV+ QLQ IP+LS+ DRVR + II+HNV +M+AFL +P ELKL+YCT +LEDNA
Subjt:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

A0A5D3C5I7 Retrotransposon protein2.9e-1451.11Show/hide
Query:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA
        ETV++I +A+++ N QLK             D   AEV+ QLQ IP+LS+ DRVR + II+HNV +M+AFL +P ELKL+YCT +LEDNA
Subjt:  ETVEVIRSAMKFMNDQLK-------------DEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA

A0A5D3CVB7 Retrotransposon protein1.7e-1455.68Show/hide
Query:  ETVEVIRSAMKFMNDQLKD-------------EYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLED
        ETVEVIRSAMKF NDQLK              E  A VVKQLQDIP+L + DR + ++I+ H+V+ ++ FL IPTELKLEYC +LLE+
Subjt:  ETVEVIRSAMKFMNDQLKD-------------EYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAACGGTAGAGGTCATTCGCAGTGCAATGAAATTCATGAATGACCAGTTGAAGGATGAGTATGGTGCAGAAGTGGTGAAACAATTGCAGGATATCCCTGAACT
GAGTAGCCACGATAGGGTGCGGTTTATGCGGATCATACTGCACAATGTCCAAGACATGAAAGCATTCTTGAGGATACCCACCGAGCTTAAATTGGAGTACTGCACCCTGC
TGCTGGAAGATAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAACGGTAGAGGTCATTCGCAGTGCAATGAAATTCATGAATGACCAGTTGAAGGATGAGTATGGTGCAGAAGTGGTGAAACAATTGCAGGATATCCCTGAACT
GAGTAGCCACGATAGGGTGCGGTTTATGCGGATCATACTGCACAATGTCCAAGACATGAAAGCATTCTTGAGGATACCCACCGAGCTTAAATTGGAGTACTGCACCCTGC
TGCTGGAAGATAATGCTTGA
Protein sequenceShow/hide protein sequence
MAETVEVIRSAMKFMNDQLKDEYGAEVVKQLQDIPELSSHDRVRFMRIILHNVQDMKAFLRIPTELKLEYCTLLLEDNA