; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020887 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020887
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:13159187..13160089
RNA-Seq ExpressionPI0020887
SyntenyPI0020887
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025967.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.0e-4969.23Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHNSQTGYGSPMIMMPAFGVGYSDSEVGTRYYESGVRPSSS
        RSNN RLRDV DD QQ LDICNNNERYM+EI+ MYD+PIVPPPVHRG               SQTGYGSPM MMP  G GY DSEV T YY++GV PSSS
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHNSQTGYGSPMIMMPAFGVGYSDSEVGTRYYESGVRPSSS

Query:  YMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRV
        YMD  PSTSYM  HRHGRG  EHN+YLY+EAP YVSD QEY+QEPENQE+  Q RV
Subjt:  YMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRV

KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.6e-5873.53Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR
        RSNN RLRDVADD QQ LDICNNN+R+MEEIH MY +PIVPP +HRG  QVEEAE DEVYHN           +QTGYGSPMIMMP FGVGY D EV T 
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR

Query:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSR
        YY+SGV PSSSYMD  PSTSYMHGHRH  G  EHN+YLY+EAPT VSD QEYQQEPENQEE  Q RVQSR
Subjt:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.5e-5972.41Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRGC +VEEAE D+VYHN           SQTGYGSPM MMP F  GY D EVG  
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR

Query:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP
        YY++GV PSSSY+D  PSTSYMHGH  G G  EHN+YLY+EAP  VSD QEYQQEPENQE+  Q RVQSRRRQP
Subjt:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.2e-6072.32Show/hide
Query:  NLRRSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEV
        N  RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRGC +VEEAE D+VYHN           SQTGYGSPM MMP F  GY D EV
Subjt:  NLRRSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEV

Query:  GTRYYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP
        G  YY++GV PSSSY+D  PSTSYMHGHR G G  EHN+YLY+EAP  VSD QEYQQEPENQE+  Q RVQSRRRQP
Subjt:  GTRYYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.1e-5670.29Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR
        RSNN RLRDV +DPQQ LDICNNNERYME+IH +YD+PIVPPPVHR   +VEEAE DEVYHN           SQTGYGSPM MMP FG GY DSEV   
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR

Query:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQPA
        YY++ V P SSYMD  PSTSYM+G  HGRG  EHN+YLY+EAPT VSD QEYQQEP+NQE+  Q RVQSRRRQPA
Subjt:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQPA

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.7e-5973.53Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR
        RSNN RLRDVADD QQ LDICNNN+R+MEEIH MY +PIVPP +HRG  QVEEAE DEVYHN           +QTGYGSPMIMMP FGVGY D EV T 
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR

Query:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSR
        YY+SGV PSSSYMD  PSTSYMHGHRH  G  EHN+YLY+EAPT VSD QEYQQEPENQEE  Q RVQSR
Subjt:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSR

A0A5A7SMM2 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.0e-5069.23Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHNSQTGYGSPMIMMPAFGVGYSDSEVGTRYYESGVRPSSS
        RSNN RLRDV DD QQ LDICNNNERYM+EI+ MYD+PIVPPPVHRG               SQTGYGSPM MMP  G GY DSEV T YY++GV PSSS
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHNSQTGYGSPMIMMPAFGVGYSDSEVGTRYYESGVRPSSS

Query:  YMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRV
        YMD  PSTSYM  HRHGRG  EHN+YLY+EAP YVSD QEY+QEPENQE+  Q RV
Subjt:  YMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRV

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-5972.41Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRGC +VEEAE D+VYHN           SQTGYGSPM MMP F  GY D EVG  
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR

Query:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP
        YY++GV PSSSY+D  PSTSYMHGH  G G  EHN+YLY+EAP  VSD QEYQQEPENQE+  Q RVQSRRRQP
Subjt:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.1e-6072.32Show/hide
Query:  NLRRSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEV
        N  RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRGC +VEEAE D+VYHN           SQTGYGSPM MMP F  GY D EV
Subjt:  NLRRSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEV

Query:  GTRYYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP
        G  YY++GV PSSSY+D  PSTSYMHGHR G G  EHN+YLY+EAP  VSD QEYQQEPENQE+  Q RVQSRRRQP
Subjt:  GTRYYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQP

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein5.5e-5770.29Show/hide
Query:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR
        RSNN RLRDV +DPQQ LDICNNNERYME+IH +YD+PIVPPPVHR   +VEEAE DEVYHN           SQTGYGSPM MMP FG GY DSEV   
Subjt:  RSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHN-----------SQTGYGSPMIMMPAFGVGYSDSEVGTR

Query:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQPA
        YY++ V P SSYMD  PSTSYM+G  HGRG  EHN+YLY+EAPT VSD QEYQQEP+NQE+  Q RVQSRRRQPA
Subjt:  YYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGACCACCACACAAACGAGCTGAACGCGGCGGCAAAGGAGAAACTCGGGGAGAAGAAAGCTTTCGGCTACAAGGGAACGCAAGGAAAAGAAGAGGAAGAAGA
AATCTGGAAAACAGAAAACTTAAGGAGATCGAACAACAAAAGACTTCGTGATGTTGCAGATGATCCACAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGG
AAGAGATACATTATATGTACGACGTACCTATTGTACCTCCACCAGTTCACAGGGGATGTGCTCAAGTGGAAGAAGCTGAACACGATGAAGTTTACCATAATAGCCAAACT
GGTTATGGTAGTCCGATGATAATGATGCCAGCATTTGGAGTAGGGTATAGTGATTCTGAGGTTGGTACAAGATATTATGAGTCAGGGGTCCGTCCATCGTCTTCATACAT
GGATACCGATCCATCAACTTCTTACATGCATGGACATAGACACGGACGCGGCCGCAGAGAACATAACCAATATCTGTACTATGAAGCACCTACATACGTCTCAGATGCAC
AAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGGAAGGGCAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGACCACCACACAAACGAGCTGAACGCGGCGGCAAAGGAGAAACTCGGGGAGAAGAAAGCTTTCGGCTACAAGGGAACGCAAGGAAAAGAAGAGGAAGAAGA
AATCTGGAAAACAGAAAACTTAAGGAGATCGAACAACAAAAGACTTCGTGATGTTGCAGATGATCCACAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGG
AAGAGATACATTATATGTACGACGTACCTATTGTACCTCCACCAGTTCACAGGGGATGTGCTCAAGTGGAAGAAGCTGAACACGATGAAGTTTACCATAATAGCCAAACT
GGTTATGGTAGTCCGATGATAATGATGCCAGCATTTGGAGTAGGGTATAGTGATTCTGAGGTTGGTACAAGATATTATGAGTCAGGGGTCCGTCCATCGTCTTCATACAT
GGATACCGATCCATCAACTTCTTACATGCATGGACATAGACACGGACGCGGCCGCAGAGAACATAACCAATATCTGTACTATGAAGCACCTACATACGTCTCAGATGCAC
AAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGGAAGGGCAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTTGA
Protein sequenceShow/hide protein sequence
MAEDHHTNELNAAAKEKLGEKKAFGYKGTQGKEEEEEIWKTENLRRSNNKRLRDVADDPQQALDICNNNERYMEEIHYMYDVPIVPPPVHRGCAQVEEAEHDEVYHNSQT
GYGSPMIMMPAFGVGYSDSEVGTRYYESGVRPSSSYMDTDPSTSYMHGHRHGRGRREHNQYLYYEAPTYVSDAQEYQQEPENQEEEGQPRVQSRRRQPA