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PI0020911 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020911
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPatatin
Genome locationchr12:4040841..4041965
RNA-Seq ExpressionPI0020911
SyntenyPI0020911
Gene Ontology termsGO:0000162 - tryptophan biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056869.1 hypothetical protein E6C27_scaffold96G00380 [Cucumis melo var. makuwa]5.7e-5192.04Show/hide
Query:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFD
        MQHNKP NTFYKSHYGMAATAPVAIGTRGTIGSL+KKEIDYFAKIELETSISSQRSQG EMASSGCRSSP TFWQS+MSWRRKKKLTSN F+TKMCSTFD
Subjt:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFD

Query:  ASRSNRINKISGL
        ASRSNR+NKISG+
Subjt:  ASRSNRINKISGL

KAG7019678.1 hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-4071.54Show/hide
Query:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELE--TSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCST
        MQHNKP+ TF KSH  MAATA VAIGTRGTIGSL+KKEIDYFAKIELE  +S SSQR Q  +MA+SGC S P TFW S+MSWRRKKK + + FV K+CS+
Subjt:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELE--TSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCST

Query:  -FDASRSNRINKISGLSYTILQNDFHSLHM
         FD S SN++NKISG +YTILQN+FHSLHM
Subjt:  -FDASRSNRINKISGLSYTILQNDFHSLHM

KGN64543.2 hypothetical protein Csa_013063 [Cucumis sativus]1.2e-4894.59Show/hide
Query:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT
        MAA APVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQG EMASSGCRSSP TFWQSLMSWRRK KLTSN FVTKMCSTFDASRSNR+NKISGLSYT
Subjt:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT

Query:  ILQNDFHSLHM
        ILQNDFHSLHM
Subjt:  ILQNDFHSLHM

XP_011648422.1 uncharacterized protein LOC105434455 [Cucumis sativus]1.2e-4894.59Show/hide
Query:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT
        MAA APVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQG EMASSGCRSSP TFWQSLMSWRRK KLTSN FVTKMCSTFDASRSNR+NKISGLSYT
Subjt:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT

Query:  ILQNDFHSLHM
        ILQNDFHSLHM
Subjt:  ILQNDFHSLHM

XP_016898893.1 PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]4.1e-4992.79Show/hide
Query:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT
        MAATAPVAIGTRGTIGSL+KKEIDYFAKIELETSISSQRSQG EMASSGCRSSP TFWQS+MSWRRKKKLTSN F+TKMCSTFDASRSNR+NKISGLSYT
Subjt:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT

Query:  ILQNDFHSLHM
        ILQNDFHSLH+
Subjt:  ILQNDFHSLHM

TrEMBL top hitse value%identityAlignment
A0A0A0LX43 Uncharacterized protein7.2e-6095.28Show/hide
Query:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFD
        MQHNKPTNTFYKSHYGMAA APVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQG EMASSGCRSSP TFWQSLMSWRRK KLTSN FVTKMCSTFD
Subjt:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFD

Query:  ASRSNRINKISGLSYTILQNDFHSLHM
        ASRSNR+NKISGLSYTILQNDFHSLHM
Subjt:  ASRSNRINKISGLSYTILQNDFHSLHM

A0A1S4DSE9 uncharacterized protein LOC1034854092.0e-4992.79Show/hide
Query:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT
        MAATAPVAIGTRGTIGSL+KKEIDYFAKIELETSISSQRSQG EMASSGCRSSP TFWQS+MSWRRKKKLTSN F+TKMCSTFDASRSNR+NKISGLSYT
Subjt:  MAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKISGLSYT

Query:  ILQNDFHSLHM
        ILQNDFHSLH+
Subjt:  ILQNDFHSLHM

A0A2N9IT24 Uncharacterized protein8.7e-2151.24Show/hide
Query:  KPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQG--AEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDAS
        K + T  K    MAA APVAIGTRGT+GSLV+KEI+YF K+E++   SS++ QG   +MAS+  RS PS  W  +M+WRRKK   S+  +  MCS  + S
Subjt:  KPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQG--AEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDAS

Query:  RSNRINKISGLSYTILQNDFH
         SNR+N+I G +Y IL+NDF+
Subjt:  RSNRINKISGLSYTILQNDFH

A0A5A7UTL1 Uncharacterized protein2.8e-5192.04Show/hide
Query:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFD
        MQHNKP NTFYKSHYGMAATAPVAIGTRGTIGSL+KKEIDYFAKIELETSISSQRSQG EMASSGCRSSP TFWQS+MSWRRKKKLTSN F+TKMCSTFD
Subjt:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFD

Query:  ASRSNRINKISGL
        ASRSNR+NKISG+
Subjt:  ASRSNRINKISGL

A0A6J1CHB1 uncharacterized protein LOC1110108625.0e-3768.75Show/hide
Query:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCR-SSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTF
        MQH+KP+ TF K    MAATAPVAIGTRGT+GSLVKKEIDYFAKIE E      R  G +MASS  R SSP TFW ++MSWRRKKK   N F+TK+CS F
Subjt:  MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCR-SSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTF

Query:  DASRSNRINKISGLSYTILQNDFHSLHM
        D S SNR+NKISG +YTILQNDF+SLHM
Subjt:  DASRSNRINKISGLSYTILQNDFHSLHM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein1.2e-0939.45Show/hide
Query:  APVAIGTRGTIGSLVKKEIDYFAKIE-LETSISSQRSQGAEMASS----GCRSSPSTFWQSLMSWRRKKKLT---SNCFVTKMCSTFDASRSNRINKISG
        AP+AIGTRGTIGSLV+KEIDYF            +R    E  ++       SS    W S   WR+KK+ T      F   MCS  + S  NR   + G
Subjt:  APVAIGTRGTIGSLVKKEIDYFAKIE-LETSISSQRSQGAEMASS----GCRSSPSTFWQSLMSWRRKKKLT---SNCFVTKMCSTFDASRSNRINKISG

Query:  LSYTILQND
         +Y IL++D
Subjt:  LSYTILQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACATAATAAACCCACCAACACATTCTACAAATCCCATTACGGAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCGCTCGTCAAGAA
GGAAATCGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGAGCTGAAATGGCTTCTTCTGGCTGTAGAAGTTCACCATCTACCTTCT
GGCAATCTTTAATGTCATGGCGAAGGAAGAAGAAGCTAACAAGCAATTGCTTCGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATAAATAAGATT
TCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACATGTAG
mRNA sequenceShow/hide mRNA sequence
AACCCCTTCAGGAGAAAGGACCCTACAACATCTCACATCCTTCATCCCAAAACTTTCTTTCCATTTCTTCAATTTTACAACATCAAAACGAATGCAACATAATAAACCCA
CCAACACATTCTACAAATCCCATTACGGAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCGCTCGTCAAGAAGGAAATCGATTATTTTGCC
AAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGAGCTGAAATGGCTTCTTCTGGCTGTAGAAGTTCACCATCTACCTTCTGGCAATCTTTAATGTCATG
GCGAAGGAAGAAGAAGCTAACAAGCAATTGCTTCGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATAAATAAGATTTCTGGGTTGAGTTATACGA
TCCTTCAGAATGATTTCCATAGCTTGCACATGTAGATGGTGATGGATGTTTCATAATCCTCAGAATATGTATCATGAGGTCAGGATCTGCAAGAGAAGCTAACAAGCAGC
TTTTCTTAAATGTGAGTTGTTCGATGTTGCTGATGCTTTATATGGTTTGTGTTTCCGAATTCTACAAAGGAAACTTCCTAGGATTTCCATTCCGATGACGAGCTACAGAG
AAAGGGAACCAATTAGCTGTTTCAAGTTTCAACCATCAAGGTACAATCCAGTTTAGGAGAAAATATTCCATTGTATGGAAGAACTGTGGCTCTTCAGATGTTTCTCCTTG
CAGGTCCATGAGAGAGAGAAGGGAGAGGGAAAGAATTAGTGCAGAGATGTAATATAGTTGTGGAAAATATAAGAAATTCGTCAATTTTTTTTATCTTCATTACACTTTCC
TGCCACCCCCATACACCTCAGATTCAAGAATGAGCTAACACAATTGCAACTCCCTCCGGGAATGACAATAGCATAAATGCTGTTGGTATGCAAGCATTCCACTACGAACA
ACCCAACTCAGTACGGGATCTCGCTGAGCATATGTAATTATTTGCGTTTTTGGCCGTAGGGTTTAGAAAAGTGCAATATATATTTATATTTTTGACCCTAAAGTTTAGGA
AAATGCAATATATAAACTCTCTAAT
Protein sequenceShow/hide protein sequence
MQHNKPTNTFYKSHYGMAATAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGAEMASSGCRSSPSTFWQSLMSWRRKKKLTSNCFVTKMCSTFDASRSNRINKI
SGLSYTILQNDFHSLHM