; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020918 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020918
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease H
Genome locationchr07:19010964..19016748
RNA-Seq ExpressionPI0020918
SyntenyPI0020918
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]6.4e-8565.73Show/hide
Query:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN
        E S+ L V   EILKE FT PLTK+ KGEAK+IEK+ ++A LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQKQGY I N
Subjt:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN

Query:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------
        SR  +GY+SS+P++I GKGK KVA+TCHIT+EE  DS+E +K  SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRLNT      
Subjt:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------

Query:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE
            T   R S FKRLSVSVTRDQKK  + VS+K  LV  DE+I S  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE EDE
Subjt:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE

KAA0055891.1 uncharacterized protein E6C27_scaffold438G00090 [Cucumis melo var. makuwa]2.9e-8541.21Show/hide
Query:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------
        +I  + R  AI SLIQFGSLEPVVIYSS + LQNND +    KEEEK V++ +EGWTLVTRR K KQ FS+KES  YR Y+ KG  + +K          
Subjt:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------

Query:  -------------------------------------------------------------------------------------------RKNARKNAR
                                                                                                   ++  RK   
Subjt:  -------------------------------------------------------------------------------------------RKNARKNAR

Query:  KFQPITEEEN------------------------------------------------------------------------------------------
          +P T+ E+                                                                                          
Subjt:  KFQPITEEEN------------------------------------------------------------------------------------------

Query:  ----------SQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ
                  S+ L V   EILKE FT PLTK+ KGEAK+IEK+ +EA LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQ
Subjt:  ----------SQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ

Query:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL
        KQGY I NSR  +GY+SS+P++I GK KVKVA+TCHIT+EE  DS+E + + SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRL
Subjt:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL

Query:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKKF-VSVNREGSLKVKRHDVVFTRPKNNELEDEAYV
        NT          T   R S FKRLSVSVTR QKK  I V +K  LV +DE+I S  PS MK+K  VSVN EGSLKVKRHDVVFTRP++NELEDE  V
Subjt:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKKF-VSVNREGSLKVKRHDVVFTRPKNNELEDEAYV

KAA0060609.1 uncharacterized protein E6C27_scaffold22G004870 [Cucumis melo var. makuwa]5.8e-8665.74Show/hide
Query:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN
        E S+   V   EILKE FT PLTK+ KGEAK+IEK+ +EA LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQKQGY I N
Subjt:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN

Query:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------
        SR  +GY+SS+PI+I GKGK KV +TCHIT+EE  DSKE +K+ SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRLNT      
Subjt:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------

Query:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDEAYV
            T   R S FKRLSVSVT+ QKK  I VS+K  LV  DE+ICS  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE EDE  V
Subjt:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDEAYV

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]6.4e-8565.73Show/hide
Query:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN
        E S+ L V   EILKE FT PLTK+ KGEAK+IEK+ ++A LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQKQGY I N
Subjt:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN

Query:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------
        SR  +GY+SS+P++I GKGK KVA+TCHIT+EE  DS+E +K  SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRLNT      
Subjt:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------

Query:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE
            T   R S FKRLSVSVTRDQKK  + VS+K  LV  DE+I S  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE EDE
Subjt:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE

TYK06199.1 uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]2.3e-8742.09Show/hide
Query:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------
        +I  + R  AIGSLIQFGSLEPVVIYSS + LQNND +    KEEEK V++ +EGWTLVTRR K KQ FS+KES  YR Y+ KG  + +K          
Subjt:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------

Query:  -------------------------------------------------------------------------------------------RKNARKNAR
                                                                                                   ++  RK   
Subjt:  -------------------------------------------------------------------------------------------RKNARKNAR

Query:  KFQPITEEE------------------------------------------------NSQK---------------------------------------
          +P T+ E                                                NSQ+                                       
Subjt:  KFQPITEEE------------------------------------------------NSQK---------------------------------------

Query:  -------------LAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ
                     L V   EILKE FT PLTK+ KGEAK+IEK+ +EA LP++RT +GFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQ
Subjt:  -------------LAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ

Query:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL
        KQGY I NSR  +GY SS+P++I GKGKVKVA+TCHIT+EE  DS+E +K+ SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRL
Subjt:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL

Query:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE
        NT          T   R S FKRLSVSVTRDQKK  + VS+K  LV  DE+I S  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE EDE
Subjt:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H3.1e-8565.73Show/hide
Query:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN
        E S+ L V   EILKE FT PLTK+ KGEAK+IEK+ ++A LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQKQGY I N
Subjt:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN

Query:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------
        SR  +GY+SS+P++I GKGK KVA+TCHIT+EE  DS+E +K  SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRLNT      
Subjt:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------

Query:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE
            T   R S FKRLSVSVTRDQKK  + VS+K  LV  DE+I S  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE EDE
Subjt:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE

A0A5A7U2W9 Gag protease polyprotein3.1e-8564.71Show/hide
Query:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN
        E S+ L +   EILKE FT PLTK+ KGEAK+IEK+ +EA LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQKQGY I N
Subjt:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN

Query:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------
        S+  +GY+SS+P++I GKGK KVA+TCHIT+EE  DSKE +K+ SQRSSVF RI     RPSVFQR+S   ++D N+ S   STRLSAFQRLNT      
Subjt:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------

Query:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDEAYV
            T   R S FKRLSVSVTR QKK  I VS+K  LV +DE+I S  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE E+E  V
Subjt:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDEAYV

A0A5A7UQP2 Integrase catalytic domain-containing protein1.4e-8541.21Show/hide
Query:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------
        +I  + R  AI SLIQFGSLEPVVIYSS + LQNND +    KEEEK V++ +EGWTLVTRR K KQ FS+KES  YR Y+ KG  + +K          
Subjt:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------

Query:  -------------------------------------------------------------------------------------------RKNARKNAR
                                                                                                   ++  RK   
Subjt:  -------------------------------------------------------------------------------------------RKNARKNAR

Query:  KFQPITEEEN------------------------------------------------------------------------------------------
          +P T+ E+                                                                                          
Subjt:  KFQPITEEEN------------------------------------------------------------------------------------------

Query:  ----------SQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ
                  S+ L V   EILKE FT PLTK+ KGEAK+IEK+ +EA LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQ
Subjt:  ----------SQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ

Query:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL
        KQGY I NSR  +GY+SS+P++I GK KVKVA+TCHIT+EE  DS+E + + SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRL
Subjt:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL

Query:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKKF-VSVNREGSLKVKRHDVVFTRPKNNELEDEAYV
        NT          T   R S FKRLSVSVTR QKK  I V +K  LV +DE+I S  PS MK+K  VSVN EGSLKVKRHDVVFTRP++NELEDE  V
Subjt:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKKF-VSVNREGSLKVKRHDVVFTRPKNNELEDEAYV

A0A5A7V4F2 Reverse transcriptase domain-containing protein2.8e-8665.74Show/hide
Query:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN
        E S+   V   EILKE FT PLTK+ KGEAK+IEK+ +EA LP++RT EGFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQKQGY I N
Subjt:  ENSQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHN

Query:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------
        SR  +GY+SS+PI+I GKGK KV +TCHIT+EE  DSKE +K+ SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRLNT      
Subjt:  SRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNT------

Query:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDEAYV
            T   R S FKRLSVSVT+ QKK  I VS+K  LV  DE+ICS  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE EDE  V
Subjt:  ----TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDEAYV

A0A5D3C783 Ribonuclease H1.1e-8742.09Show/hide
Query:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------
        +I  + R  AIGSLIQFGSLEPVVIYSS + LQNND +    KEEEK V++ +EGWTLVTRR K KQ FS+KES  YR Y+ KG  + +K          
Subjt:  MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKA---------

Query:  -------------------------------------------------------------------------------------------RKNARKNAR
                                                                                                   ++  RK   
Subjt:  -------------------------------------------------------------------------------------------RKNARKNAR

Query:  KFQPITEEE------------------------------------------------NSQK---------------------------------------
          +P T+ E                                                NSQ+                                       
Subjt:  KFQPITEEE------------------------------------------------NSQK---------------------------------------

Query:  -------------LAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ
                     L V   EILKE FT PLTK+ KGEAK+IEK+ +EA LP++RT +GFDPKAYKLMAKA Y+FTTRTELK VKIFDER EL PT+KKLQ
Subjt:  -------------LAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQ

Query:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL
        KQGY I NSR  +GY SS+P++I GKGKVKVA+TCHIT+EE  DS+E +K+ SQRSSVF RI  S  RPSVFQR+S   ++D N+ S   STRLSAFQRL
Subjt:  KQGYFIHNSRPRVGYKSSKPIQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRL

Query:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE
        NT          T   R S FKRLSVSVTRDQKK  + VS+K  LV  DE+I S  PS MK+K FVSVN EGSLKVKRHDVVFTRP++NE EDE
Subjt:  NT----------TLVMRTSTFKRLSVSVTRDQKKPLIYVSSKPGLVMKDEKICSVVPS-MKKK-FVSVNREGSLKVKRHDVVFTRPKNNELEDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCATCCAGAGGGTCGATCACTTGCTATAGGGAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAAAATAATGACAT
CCAAACTGTTTACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGATGACGAGGGATGGACGCTAGTAACGCGTCGAAAGAAGCATAAACAAAAATTTTCTAAAAAAGAAT
CTCGTTTGTACCGAGAGTATAAAAGAAAAGGTAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACTGAAGAAGAAAAT
TCGCAAAAATTAGCGGTTGGAGGTGTCGAAATATTAAAGGAAATCTTCACCACACCACTTACCAAGATGGTTAAAGGAGAGGCGAAAAGAATTGAGAAAGAGAGCATAGA
AGCATGTCTTCCAAAAAAACGAACGACGGAGGGATTTGACCCAAAAGCATATAAGTTGATGGCAAAGGCGAGTTATGAATTTACAACCCGTACTGAGCTTAAAGTCGTGA
AGATATTTGATGAAAGGCATGAGCTTTGGCCTACGAAAAAGAAACTTCAAAAGCAAGGATATTTTATACATAATTCAAGACCGAGAGTTGGGTATAAGTCTTCCAAGCCG
ATTCAAATAATTGGTAAAGGAAAAGTAAAAGTTGCTGACACATGTCACATTACTATTGAAGAATGCAATGATTCTAAAGAAGACGAAAAAAACGAAAGTCAAAGGAGTTC
TGTTTTTTATCGCATCACCTCTTCCACTTCACGCCCTTCAGTTTTCCAGAGGTTGAGTATACCAACAAGCGAGGACAAAAATGAAGGGTCAGCTTCTGATTCCACCCGAC
TTTCTGCCTTTCAGAGATTAAATACAACTTTGGTTATGCGAACCTCTACCTTCAAAAGGTTAAGTGTGTCGGTGACAAGAGACCAGAAGAAACCTCTCATATATGTTTCA
AGCAAACCTGGCTTAGTGATGAAGGATGAGAAAATTTGCAGCGTTGTTCCATCGATGAAAAAGAAGTTCGTCTCCGTAAACAGAGAGGGTTCATTAAAAGTAAAACGACA
TGATGTTGTTTTTACTCGACCTAAAAACAATGAGCTAGAAGACGAAGCATATGTGATTTTGCCACTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCATCCAGAGGGTCGATCACTTGCTATAGGGAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAAAATAATGACAT
CCAAACTGTTTACTCAAAAGAAGAAGAAAAGCACGTGGAGGATGATGACGAGGGATGGACGCTAGTAACGCGTCGAAAGAAGCATAAACAAAAATTTTCTAAAAAAGAAT
CTCGTTTGTACCGAGAGTATAAAAGAAAAGGTAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACTGAAGAAGAAAAT
TCGCAAAAATTAGCGGTTGGAGGTGTCGAAATATTAAAGGAAATCTTCACCACACCACTTACCAAGATGGTTAAAGGAGAGGCGAAAAGAATTGAGAAAGAGAGCATAGA
AGCATGTCTTCCAAAAAAACGAACGACGGAGGGATTTGACCCAAAAGCATATAAGTTGATGGCAAAGGCGAGTTATGAATTTACAACCCGTACTGAGCTTAAAGTCGTGA
AGATATTTGATGAAAGGCATGAGCTTTGGCCTACGAAAAAGAAACTTCAAAAGCAAGGATATTTTATACATAATTCAAGACCGAGAGTTGGGTATAAGTCTTCCAAGCCG
ATTCAAATAATTGGTAAAGGAAAAGTAAAAGTTGCTGACACATGTCACATTACTATTGAAGAATGCAATGATTCTAAAGAAGACGAAAAAAACGAAAGTCAAAGGAGTTC
TGTTTTTTATCGCATCACCTCTTCCACTTCACGCCCTTCAGTTTTCCAGAGGTTGAGTATACCAACAAGCGAGGACAAAAATGAAGGGTCAGCTTCTGATTCCACCCGAC
TTTCTGCCTTTCAGAGATTAAATACAACTTTGGTTATGCGAACCTCTACCTTCAAAAGGTTAAGTGTGTCGGTGACAAGAGACCAGAAGAAACCTCTCATATATGTTTCA
AGCAAACCTGGCTTAGTGATGAAGGATGAGAAAATTTGCAGCGTTGTTCCATCGATGAAAAAGAAGTTCGTCTCCGTAAACAGAGAGGGTTCATTAAAAGTAAAACGACA
TGATGTTGTTTTTACTCGACCTAAAAACAATGAGCTAGAAGACGAAGCATATGTGATTTTGCCACTTTTATAA
Protein sequenceShow/hide protein sequence
MIHPEGRSLAIGSLIQFGSLEPVVIYSSPEVLQNNDIQTVYSKEEEKHVEDDDEGWTLVTRRKKHKQKFSKKESRLYREYKRKGKSQRRKARKNARKNARKFQPITEEEN
SQKLAVGGVEILKEIFTTPLTKMVKGEAKRIEKESIEACLPKKRTTEGFDPKAYKLMAKASYEFTTRTELKVVKIFDERHELWPTKKKLQKQGYFIHNSRPRVGYKSSKP
IQIIGKGKVKVADTCHITIEECNDSKEDEKNESQRSSVFYRITSSTSRPSVFQRLSIPTSEDKNEGSASDSTRLSAFQRLNTTLVMRTSTFKRLSVSVTRDQKKPLIYVS
SKPGLVMKDEKICSVVPSMKKKFVSVNREGSLKVKRHDVVFTRPKNNELEDEAYVILPLL