CuGenDBv2

Gene ID	PI0020930
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	40S ribosomal protein S26
Genome location	chr10:13029173..13032202
RNA-Seq Expression	PI0020930
Synteny	PI0020930
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0019430 - removal of superoxide radicals (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004784 - superoxide dismutase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000892 - Ribosomal protein S26e IPR038551 - Ribosomal protein S26e superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

GAV62493.1 LOW QUALITY PROTEIN: Sod_Fe_N domain-containing protein/Ribosomal_S26e domain-containing protein/Sod_Fe_C domain-containing protein [Cephalotus follicularis]

1.7e-63

96.09

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNR+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPAR
        FIRRR+D  KPGQPGQAPRPAGAGNP R
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPAR

XP_004146441.1 40S ribosomal protein S26-1 [Cucumis sativus]

2.9e-66

99.22

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRREDQAKPGQPGQAPRP GAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

XP_022941874.1 40S ribosomal protein S26-3-like [Cucurbita moschata]

1.7e-63

94.7

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAK---PGQPGQAPRPAGAGNPARV
        F+RRR+DQ K   PGQPGQAPRP GAGNPARV
Subjt:  FIRRREDQAK---PGQPGQAPRPAGAGNPARV

XP_022943123.1 40S ribosomal protein S26-1-like [Cucurbita moschata]

9.2e-65

97.67

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRR+DQ KPGQPGQAPRPAGAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

XP_023529394.1 40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]

9.2e-65

97.67

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRR+DQ KPGQPGQAPRPAGAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM45 40S ribosomal protein S26

1.4e-66

99.22

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRREDQAKPGQPGQAPRP GAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

A0A1S3C5M1 40S ribosomal protein S26

1.4e-66

99.22

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRREDQAKPGQPGQAPRP GAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

A0A5A7VIJ0 40S ribosomal protein S26

1.4e-66

99.22

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRREDQAKPGQPGQAPRP GAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

A0A6J1FWD9 40S ribosomal protein S26

4.5e-65

97.67

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRR+DQ KPGQPGQAPRPAGAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

A0A6J1JIN0 40S ribosomal protein S26

4.5e-65

97.67

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPARV
        FIRRR+DQ KPGQPGQAPRPAGAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPARV

SwissProt top hits

e value

%identity

Alignment

O45499 40S ribosomal protein S26

2.6e-38

68.33

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRP
        F  +R   A+PG PG  PRP
Subjt:  FIRRREDQAKPGQPGQAPRP

P49206 40S ribosomal protein S26-1

6.9e-55

84.25

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPA
        F RR+ED  KPGQPGQAPRPAG G  A
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPA

P49216 40S ribosomal protein S26

5.6e-49

76.56

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQP-GQAPRPAGAGNPA
        F RRRED+ +  +P G AP P GA  PA
Subjt:  FIRRREDQAKPGQP-GQAPRPAGAGNPA

Q8LPJ7 40S ribosomal protein S26-2

6.9e-55

84.25

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPA
        F RR+ED  KPGQPGQAPRPAG G  A
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPA

Q9LYK9 40S ribosomal protein S26-3

2.0e-54

85.04

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPA
        F RR+ED  KP QPGQAPRPAG G PA
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPA

Arabidopsis top hits

e value

%identity

Alignment

AT2G40510.1 Ribosomal protein S26e family protein

4.9e-56

84.25

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPA
        F RR+ED  KPGQPGQAPRPAG G  A
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPA

AT2G40590.1 Ribosomal protein S26e family protein

4.9e-56

84.25

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPA
        F RR+ED  KPGQPGQAPRPAG G  A
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPA

AT3G56340.1 Ribosomal protein S26e family protein

1.4e-55

85.04

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPAGAGNPA
        F RR+ED  KP QPGQAPRPAG G PA
Subjt:  FIRRREDQAKPGQPGQAPRPAGAGNPA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGGAAATGCTGTCCTAAGGACAAGGCTATTAA
GAGGTTTCTAGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACT
GTGTTTCCTGTGCTATTCACTCTCATGTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATAGGCAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGGCAAAG
CCCGGTCAGCCAGGTCAAGCACCTCGTCCTGCTGGAGCTGGAAATCCTGCTCGTGTATAA

mRNA sequence

Show/hide mRNA sequence

TTTTTTTTGGTTAAAGGGTTCTTTTGCAATTTTAGTTTTCTATTTGTTGGTTTGGTTCGGCGGGACCGGAGATCCATATAAAGCGTTTACCGGTACGGATCTTCTATATC
TCACACTCAGCGTTTGCCCCCACAAAACCCTAATCGGCTGCCTCTCTCTCTCTGCTTCGTTTGAAGATCTCCAACTTTGTGACGATGACTTTCAAGCGCAGGAACGGCGG
ACGTAACAAGCACGGCCGTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGGAAATGCTGTCCTAAGGACAAGGCTATTAAGAGGTTTCTAGTGAGGAATATTGTGG
AGCAGGCTGCTGTTAGGGATGTCCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCTCAT
GTTGTGAGAGTTCGATCTCGTACTGATAGAAGAAATAGGCAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGGCAAAGCCCGGTCAGCCAGGTCAAGCACCTCG
TCCTGCTGGAGCTGGAAATCCTGCTCGTGTATAAAAGAAACCTTTTCATGGCTTCTATGAGTAAGTCGTAGGGATCTTTTATAGGCACTCTTTTATAGTTTGGTTGTTTC
TTTTGTGGATGAAAGTGAATTTTTGAATCAATATGGAAACAAACTTATCCGAGAATTTTGCAACTTGGAATGAGCTGAAGACCTGTTATTGAGTTATCTAATGAGTTTTC
TTCACTTTCTTGTTTGGATTGGATTGGATTTTCTCCCATTTTCTAACAATATGGATTCGAACCTCTTACCTCTTGGTCGAGATTTTATTTATGTCGGCCAGATTGTTTGG
TATTTTCTAATAGGTATAGGAGGGGGAAACTAGAAAACATAAAAATTAGATCAATGGGAAAAAAACTCCATGACATTTAATTTTAC

Protein sequence

Show/hide protein sequence

MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAK
PGQPGQAPRPAGAGNPARV

PI0020930 (gene) of Melon (PI 482460) v1 genome