; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0020992 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0020992
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr03:10657646..10659321
RNA-Seq ExpressionPI0020992
SyntenyPI0020992
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036824.1 uncharacterized protein E6C27_scaffold20G001240 [Cucumis melo var. makuwa]1.6e-5633.61Show/hide
Query:  SHQSIHSMTPLP-----VPISDPLISRLSAPSPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNASTPIIDDPHFDPQT
        + + IHS +  P     +P    L    + PS Y        S S +S  D  P     H +  T+         S + D Q  + +   I   +  P  
Subjt:  SHQSIHSMTPLP-----VPISDPLISRLSAPSPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNASTPIIDDPHFDPQT

Query:  THTSVPTSHPGPSSTQPKIKVKNKR--------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLP
           + P++   P S  PK+   +KR        ++T +GR+K+ +++  VP+DG+SFHHE +V +WK+VVQRRIADE  +S  H SC++IM LI +  L 
Subjt:  THTSVPTSHPGPSSTQPKIKVKNKR--------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLP

Query:  PTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLP-NEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV---
         T+SN+GPFYP+LIRE  VN+P  F NPSSL Y  IH+RG  F +S   +N FL   +  +  ++ P +  LA  L+GGT++ WP +G  +AA LS+   
Subjt:  PTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLP-NEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV---

Query:  -------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGA
                                                   NQL RH+ S+ VK+PI LPRFF S +L  N  +L   +APGP    +  SY+LFQG+
Subjt:  -------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGA

Query:  YVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT
        +V DI H +    S  +  T        G  +   LA +++++LT+ESR+L+  I+ LSERR  +D++   ++ L P+T
Subjt:  YVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT

KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.1e-5735.96Show/hide
Query:  MVSTRRGYYTLKIPIKKNSTPNDVGPSVKDLRTNKHGVHLRGPSKKASTPESSHPVVTSPSPSISIVPPKVPISPTSSFTSDTSHQSIHSMTPL-PVPIS
        MV+TR+  YT K      ST   +      LR   HG+ ++ PS    + +S H           IVP  V     ++ T   +H S   +  L  VP++
Subjt:  MVSTRRGYYTLKIPIKKNSTPNDVGPSVKDLRTNKHGVHLRGPSKKASTPESSHPVVTSPSPSISIVPPKVPISPTSSFTSDTSHQSIHSMTPL-PVPIS

Query:  DPLISRLSAP-----SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNA---STPIIDDPHFDP----------QTTHT
          L+ +++AP        D+V    T      S  + P+   +  I+       + P  S++P+ + T+A    TP  +D   +P              T
Subjt:  DPLISRLSAP-----SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNA---STPIIDDPHFDP----------QTTHT

Query:  SVPTSHPGPSSTQPKIKVKNKR-------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVS
          P +   PSS   ++K   K+       ++T +GR+K+P+++  VP+DG+SFH E ++H+WK+VVQRRIADE  +SD HHSC++IM LI + +L  T+S
Subjt:  SVPTSHPGPSSTQPKIKVKNKR-------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVS

Query:  NLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV-------
        ++ PFYP+LIRE  VN+P++  +PSS DY T+H+RG  F++SP  +N F+ N+   N   +S +++ LASEL+  T++ WP +G + A  LSV       
Subjt:  NLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV-------

Query:  --NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP
          NQL RH+ S+ VKLPI LPRFF   +L  N  +L   +APGP    L LSYRLFQG++VPDI+H + P
Subjt:  --NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP

KAA0066659.1 uncharacterized protein E6C27_scaffold979G00910 [Cucumis melo var. makuwa]1.4e-5544.87Show/hide
Query:  PSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVSNLGPFYPKLIREMFV
        P S + K +   + ++T  GR+K+P+++ FVP+DG+SFH E  V +WKYV+QRR+A E  V D HHS L++M LI +     T+SN+G FYPKLI+E+ V
Subjt:  PSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVSNLGPFYPKLIREMFV

Query:  NIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLPNEPQTS-PTSNELASELTGGTVTHWPSSGY-----------------LSAARLSVNQLKR
        N+PS F+NPSS +Y+TIH+RG+ F +SP  +N FL   + +    S P+++ LAS L+GGT + W  +G                  + A     +QL R
Subjt:  NIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLPNEPQTS-PTSNELASELTGGTVTHWPSSGY-----------------LSAARLSVNQLKR

Query:  HIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP
        H+ ++ VK+PI LP FF S ++  N  IL PN+A GP+   L LSYRLFQG+YV DIEH +RP
Subjt:  HIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP

KAA0067563.1 uncharacterized protein E6C27_scaffold485G00260 [Cucumis melo var. makuwa]2.1e-5935.16Show/hide
Query:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD
        P  VP   T    SD S +S  S     P P        +P  S  S+P  SP  ++A  + S  +S +  +VP      R   T +       P    D
Subjt:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD

Query:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHV-NFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC
        +   N   P+ D      Q    SVPT    P  ++ K +   + ++T +GR+K+P+++ + + VDG+SFH E +V +WK+VVQRRIAD+  +SD +HSC
Subjt:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHV-NFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC

Query:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS
        ++IM LI +V L  T+ ++G FYP+LIRE  VN+P+ F +PSSLDY  +H+RG  F++S   +N FL N    N   +SP++N LAS L GGT++ WP +
Subjt:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS

Query:  GYLSAARLSV----------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSL
        G + A  LSV                                              NQL RH+ S+ VKLPI LPRFF   +L  N  +L  ++AP P  
Subjt:  GYLSAARLSV----------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSL

Query:  SKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT
          L LSYRLFQG +VPDI+H++       +  T        G  +   LA ++L++L  ESRSL+T I  +SERR  IDS+   ++   P++
Subjt:  SKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT

XP_008437685.1 PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo]4.2e-6037.03Show/hide
Query:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD
        P  VP   T    SD S +S  S     P P        +P  S  S+P  SP  ++A  + S  +S +  +V       R   T +       P    D
Subjt:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD

Query:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVP-VDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC
        +   N   P+ D      Q    SVPT    P  ++ K +   + ++T +GR+K+P+++  VP VDG+SFH E +V +WK++VQRRIA++  +SD +HSC
Subjt:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVP-VDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC

Query:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS
        ++IM LI +V L  T+ ++G FYP+LIRE  VN+P+ F +PSSLDY  +H++G  F++S   +N FL N    N   +SP++N LAS L GGT++ WP +
Subjt:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS

Query:  GYLSAARLSVNQLKRH------IDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPD
        G + A  LSV     H      + S+ VKLPI LPRFF   +L  N  +L  ++APGP    L LSYRLFQG +VPDI+H +       +  T       
Subjt:  GYLSAARLSVNQLKRH------IDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPD

Query:  GGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPA
            +   LA ++ ++LT ESRSL+T I+ +SERR  IDS+   ++   P+
Subjt:  GGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPA

TrEMBL top hitse value%identityAlignment
A0A1S3AV82 uncharacterized protein LOC1034830262.0e-6037.03Show/hide
Query:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD
        P  VP   T    SD S +S  S     P P        +P  S  S+P  SP  ++A  + S  +S +  +V       R   T +       P    D
Subjt:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD

Query:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVP-VDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC
        +   N   P+ D      Q    SVPT    P  ++ K +   + ++T +GR+K+P+++  VP VDG+SFH E +V +WK++VQRRIA++  +SD +HSC
Subjt:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVP-VDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC

Query:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS
        ++IM LI +V L  T+ ++G FYP+LIRE  VN+P+ F +PSSLDY  +H++G  F++S   +N FL N    N   +SP++N LAS L GGT++ WP +
Subjt:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS

Query:  GYLSAARLSVNQLKRH------IDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPD
        G + A  LSV     H      + S+ VKLPI LPRFF   +L  N  +L  ++APGP    L LSYRLFQG +VPDI+H +       +  T       
Subjt:  GYLSAARLSVNQLKRH------IDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPD

Query:  GGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPA
            +   LA ++ ++LT ESRSL+T I+ +SERR  IDS+   ++   P+
Subjt:  GGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPA

A0A5A7SZY3 Reverse transcriptase Ty1/copia-type domain-containing protein7.9e-5733.61Show/hide
Query:  SHQSIHSMTPLP-----VPISDPLISRLSAPSPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNASTPIIDDPHFDPQT
        + + IHS +  P     +P    L    + PS Y        S S +S  D  P     H +  T+         S + D Q  + +   I   +  P  
Subjt:  SHQSIHSMTPLP-----VPISDPLISRLSAPSPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNASTPIIDDPHFDPQT

Query:  THTSVPTSHPGPSSTQPKIKVKNKR--------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLP
           + P++   P S  PK+   +KR        ++T +GR+K+ +++  VP+DG+SFHHE +V +WK+VVQRRIADE  +S  H SC++IM LI +  L 
Subjt:  THTSVPTSHPGPSSTQPKIKVKNKR--------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLP

Query:  PTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLP-NEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV---
         T+SN+GPFYP+LIRE  VN+P  F NPSSL Y  IH+RG  F +S   +N FL   +  +  ++ P +  LA  L+GGT++ WP +G  +AA LS+   
Subjt:  PTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLP-NEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV---

Query:  -------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGA
                                                   NQL RH+ S+ VK+PI LPRFF S +L  N  +L   +APGP    +  SY+LFQG+
Subjt:  -------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGA

Query:  YVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT
        +V DI H +    S  +  T        G  +   LA +++++LT+ESR+L+  I+ LSERR  +D++   ++ L P+T
Subjt:  YVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT

A0A5A7VHK0 Uncharacterized protein1.0e-5935.16Show/hide
Query:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD
        P  VP   T    SD S +S  S     P P        +P  S  S+P  SP  ++A  + S  +S +  +VP      R   T +       P    D
Subjt:  PPKVPISPTSSFTSDTSHQSIHS---MTPLP----VPISDPLISRLSAP--SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPD

Query:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHV-NFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC
        +   N   P+ D      Q    SVPT    P  ++ K +   + ++T +GR+K+P+++ + + VDG+SFH E +V +WK+VVQRRIAD+  +SD +HSC
Subjt:  NQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHV-NFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSC

Query:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS
        ++IM LI +V L  T+ ++G FYP+LIRE  VN+P+ F +PSSLDY  +H+RG  F++S   +N FL N    N   +SP++N LAS L GGT++ WP +
Subjt:  LAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSS

Query:  GYLSAARLSV----------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSL
        G + A  LSV                                              NQL RH+ S+ VKLPI LPRFF   +L  N  +L  ++AP P  
Subjt:  GYLSAARLSV----------------------------------------------NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSL

Query:  SKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT
          L LSYRLFQG +VPDI+H++       +  T        G  +   LA ++L++L  ESRSL+T I  +SERR  IDS+   ++   P++
Subjt:  SKLHLSYRLFQGAYVPDIEHSIRPPSSTNLPHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPAT

A0A5A7VN31 Uncharacterized protein6.7e-5644.87Show/hide
Query:  PSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVSNLGPFYPKLIREMFV
        P S + K +   + ++T  GR+K+P+++ FVP+DG+SFH E  V +WKYV+QRR+A E  V D HHS L++M LI +     T+SN+G FYPKLI+E+ V
Subjt:  PSSTQPKIKVKNKRVSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVSNLGPFYPKLIREMFV

Query:  NIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLPNEPQTS-PTSNELASELTGGTVTHWPSSGY-----------------LSAARLSVNQLKR
        N+PS F+NPSS +Y+TIH+RG+ F +SP  +N FL   + +    S P+++ LAS L+GGT + W  +G                  + A     +QL R
Subjt:  NIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLPNEPQTS-PTSNELASELTGGTVTHWPSSGY-----------------LSAARLSVNQLKR

Query:  HIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP
        H+ ++ VK+PI LP FF S ++  N  IL PN+A GP+   L LSYRLFQG+YV DIEH +RP
Subjt:  HIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP

A0A5D3B7L1 Gag-pol polyprotein5.5e-5835.96Show/hide
Query:  MVSTRRGYYTLKIPIKKNSTPNDVGPSVKDLRTNKHGVHLRGPSKKASTPESSHPVVTSPSPSISIVPPKVPISPTSSFTSDTSHQSIHSMTPL-PVPIS
        MV+TR+  YT K      ST   +      LR   HG+ ++ PS    + +S H           IVP  V     ++ T   +H S   +  L  VP++
Subjt:  MVSTRRGYYTLKIPIKKNSTPNDVGPSVKDLRTNKHGVHLRGPSKKASTPESSHPVVTSPSPSISIVPPKVPISPTSSFTSDTSHQSIHSMTPL-PVPIS

Query:  DPLISRLSAP-----SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNA---STPIIDDPHFDP----------QTTHT
          L+ +++AP        D+V    T      S  + P+   +  I+       + P  S++P+ + T+A    TP  +D   +P              T
Subjt:  DPLISRLSAP-----SPYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNA---STPIIDDPHFDP----------QTTHT

Query:  SVPTSHPGPSSTQPKIKVKNKR-------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVS
          P +   PSS   ++K   K+       ++T +GR+K+P+++  VP+DG+SFH E ++H+WK+VVQRRIADE  +SD HHSC++IM LI + +L  T+S
Subjt:  SVPTSHPGPSSTQPKIKVKNKR-------VSTLSGRRKVPMHVNFVPVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVS

Query:  NLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV-------
        ++ PFYP+LIRE  VN+P++  +PSS DY T+H+RG  F++SP  +N F+ N+   N   +S +++ LASEL+  T++ WP +G + A  LSV       
Subjt:  NLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFL-NINLPNEPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSV-------

Query:  --NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP
          NQL RH+ S+ VKLPI LPRFF   +L  N  +L   +APGP    L LSYRLFQG++VPDI+H + P
Subjt:  --NQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGCACAAGACGTGGTTATTACACCCTTAAAATTCCTATAAAAAAGAATTCTACTCCAAATGATGTTGGTCCCTCTGTCAAGGACTTACGGACTAACAAACATGG
TGTTCATCTGCGTGGTCCTTCCAAGAAAGCGTCCACCCCTGAGTCTTCTCATCCTGTGGTAACTTCTCCTTCTCCTTCTATTTCAATTGTTCCCCCTAAGGTTCCTATCT
CTCCTACTTCTTCTTTCACCTCTGACACTTCTCATCAAAGTATTCATTCAATGACTCCGCTTCCTGTTCCTATCTCTGATCCCTTGATTTCTAGGTTGTCTGCCCCTTCT
CCTTATGACAATGTTGCTGTTACCACTACCTCGTCTTCTTCTTCTTCTTCTCAAGACAACGTTCCCCTGTCTCGTTTGCTTCATCGTATTTCCACTACTTCTGTCCCTGA
GCCTTCTTATCCTCATCCGAGTACTCTTCCTGACAATCAAAATACAAATGCCTCCACTCCTATTATTGATGACCCTCACTTTGATCCTCAAACCACTCATACTTCTGTTC
CTACTTCACACCCTGGTCCTTCCTCTACTCAACCAAAGATTAAAGTCAAGAATAAGAGAGTGTCTACACTATCTGGTCGTCGAAAGGTCCCTATGCATGTTAATTTTGTT
CCTGTTGATGGCCTTTCTTTCCATCATGAGGCGCATGTCCACAAATGGAAATATGTGGTACAACGTCGTATTGCTGATGAGTCAGAAGTCTCTGATGATCATCATTCTTG
TCTGGCTATAATGACTCTCATCTCGCAAGTTAAACTTCCGCCCACTGTCTCCAATCTTGGCCCCTTTTATCCTAAATTAATTAGGGAAATGTTTGTTAACATTCCCTCTT
CTTTTGAAAATCCAAGCAGCCTGGATTACCATACTATTCATGTGCGAGGTATGCCTTTCTCTGTTTCCCCTGATTCTTTAAATGCTTTTCTTAACATTAATCTTCCTAAT
GAACCTCAAACCTCTCCTACCTCTAATGAGCTTGCCTCTGAGTTAACAGGAGGGACTGTCACTCACTGGCCCTCTTCCGGCTATCTTTCTGCAGCTCGTCTCAGTGTTAA
TCAACTAAAGCGCCATATCGATTCCTATGCCGTCAAGCTTCCTATTTGTCTGCCCCGTTTCTTCTATAGCTTTGTTCTCACTCACAACCGTACAATTCTTCATCCGAATG
AGGCTCCTGGTCCTTCTCTTTCCAAGCTCCATTTAAGTTATCGTCTCTTTCAAGGAGCTTATGTCCCTGATATTGAGCATTCTATTCGCCCTCCGTCTTCTACTAATCTC
CCTCACACTGATGGTTTGAGAACTCCTGATGGTGGTTTATTACTTCCTTCTTCTTTGGCAAATCAAGTTCTTCATGCCTTGACCTCTGAATCCCGCAGTCTCAGCACCAT
AATTCATGATCTTTCAGAGAGACGAAAGCTCATTGACTCTGTTGCCTCATCTGTTCAGTTGTTGTTTCCTGCCACTGAGGAAGCACCTGGTGATCAACCTGTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGCACAAGACGTGGTTATTACACCCTTAAAATTCCTATAAAAAAGAATTCTACTCCAAATGATGTTGGTCCCTCTGTCAAGGACTTACGGACTAACAAACATGG
TGTTCATCTGCGTGGTCCTTCCAAGAAAGCGTCCACCCCTGAGTCTTCTCATCCTGTGGTAACTTCTCCTTCTCCTTCTATTTCAATTGTTCCCCCTAAGGTTCCTATCT
CTCCTACTTCTTCTTTCACCTCTGACACTTCTCATCAAAGTATTCATTCAATGACTCCGCTTCCTGTTCCTATCTCTGATCCCTTGATTTCTAGGTTGTCTGCCCCTTCT
CCTTATGACAATGTTGCTGTTACCACTACCTCGTCTTCTTCTTCTTCTTCTCAAGACAACGTTCCCCTGTCTCGTTTGCTTCATCGTATTTCCACTACTTCTGTCCCTGA
GCCTTCTTATCCTCATCCGAGTACTCTTCCTGACAATCAAAATACAAATGCCTCCACTCCTATTATTGATGACCCTCACTTTGATCCTCAAACCACTCATACTTCTGTTC
CTACTTCACACCCTGGTCCTTCCTCTACTCAACCAAAGATTAAAGTCAAGAATAAGAGAGTGTCTACACTATCTGGTCGTCGAAAGGTCCCTATGCATGTTAATTTTGTT
CCTGTTGATGGCCTTTCTTTCCATCATGAGGCGCATGTCCACAAATGGAAATATGTGGTACAACGTCGTATTGCTGATGAGTCAGAAGTCTCTGATGATCATCATTCTTG
TCTGGCTATAATGACTCTCATCTCGCAAGTTAAACTTCCGCCCACTGTCTCCAATCTTGGCCCCTTTTATCCTAAATTAATTAGGGAAATGTTTGTTAACATTCCCTCTT
CTTTTGAAAATCCAAGCAGCCTGGATTACCATACTATTCATGTGCGAGGTATGCCTTTCTCTGTTTCCCCTGATTCTTTAAATGCTTTTCTTAACATTAATCTTCCTAAT
GAACCTCAAACCTCTCCTACCTCTAATGAGCTTGCCTCTGAGTTAACAGGAGGGACTGTCACTCACTGGCCCTCTTCCGGCTATCTTTCTGCAGCTCGTCTCAGTGTTAA
TCAACTAAAGCGCCATATCGATTCCTATGCCGTCAAGCTTCCTATTTGTCTGCCCCGTTTCTTCTATAGCTTTGTTCTCACTCACAACCGTACAATTCTTCATCCGAATG
AGGCTCCTGGTCCTTCTCTTTCCAAGCTCCATTTAAGTTATCGTCTCTTTCAAGGAGCTTATGTCCCTGATATTGAGCATTCTATTCGCCCTCCGTCTTCTACTAATCTC
CCTCACACTGATGGTTTGAGAACTCCTGATGGTGGTTTATTACTTCCTTCTTCTTTGGCAAATCAAGTTCTTCATGCCTTGACCTCTGAATCCCGCAGTCTCAGCACCAT
AATTCATGATCTTTCAGAGAGACGAAAGCTCATTGACTCTGTTGCCTCATCTGTTCAGTTGTTGTTTCCTGCCACTGAGGAAGCACCTGGTGATCAACCTGTCTCTTAA
Protein sequenceShow/hide protein sequence
MVSTRRGYYTLKIPIKKNSTPNDVGPSVKDLRTNKHGVHLRGPSKKASTPESSHPVVTSPSPSISIVPPKVPISPTSSFTSDTSHQSIHSMTPLPVPISDPLISRLSAPS
PYDNVAVTTTSSSSSSSQDNVPLSRLLHRISTTSVPEPSYPHPSTLPDNQNTNASTPIIDDPHFDPQTTHTSVPTSHPGPSSTQPKIKVKNKRVSTLSGRRKVPMHVNFV
PVDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCLAIMTLISQVKLPPTVSNLGPFYPKLIREMFVNIPSSFENPSSLDYHTIHVRGMPFSVSPDSLNAFLNINLPN
EPQTSPTSNELASELTGGTVTHWPSSGYLSAARLSVNQLKRHIDSYAVKLPICLPRFFYSFVLTHNRTILHPNEAPGPSLSKLHLSYRLFQGAYVPDIEHSIRPPSSTNL
PHTDGLRTPDGGLLLPSSLANQVLHALTSESRSLSTIIHDLSERRKLIDSVASSVQLLFPATEEAPGDQPVS