; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021009 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021009
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionE3 ubiquitin-protein ligase synoviolin B-like
Genome locationchr04:31006619..31007261
RNA-Seq ExpressionPI0021009
SyntenyPI0021009
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605221.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3854.55Show/hide
Query:  IIQQTSPTPISDALFHFPLPELELENPPF----FFLQFLSP-----AGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISVDLDP---PQYSPPV
        I+QQT  TP+ DALF F L   +L++PPF    + LQFLS      A    I+  ISSFALQLAAGN++LNFH++  VD++  I VDLDP    +YSP  
Subjt:  IIQQTSPTPISDALFHFPLPELELENPPF----FFLQFLSP-----AGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISVDLDP---PQYSPPV

Query:  RNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCR
         NGAPAS IERL  +++D     EE GD C VC     CE  + +EEV+RIPCGHVYHK CILKWL+++NSCPLCR
Subjt:  RNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCR

XP_008466247.1 PREDICTED: E3 ubiquitin-protein ligase synoviolin B-like [Cucumis melo]6.4e-8190.23Show/hide
Query:  IIQQTSPTPISDALFHFPLPELELENPPFFF----LQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPA
        IIQQT PTPISDALFHFPLPELELENPPFFF    LQFLSPA S AIFHNISSFALQLAAGN+NLNFHLIATVDLLYTISV  DLDPPQYSP VRNGAPA
Subjt:  IIQQTSPTPISDALFHFPLPELELENPPFFF----LQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPA

Query:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEK-EEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF
        SVIERLM+EKYDD NGREEMGDQCCVCYEDL+CEREEEK EEVTRIPCGHVYHK CILKWL INNSCPLCRREF
Subjt:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEK-EEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF

XP_011650219.1 RING-H2 finger protein ATL16 [Cucumis sativus]6.0e-4756.72Show/hide
Query:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPPFF-------FLQF--LSPAGSAAIFHNISSFALQLAAGNINLNFHL
        T G P++ ++       Q+ +S    I+QQTSP  ISD L  FPL   ELE+PPF        FL    +S A   AIF  ISSFA QL AGN+N NFH+
Subjt:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPPFF-------FLQF--LSPAGSAAIFHNISSFALQLAAGNINLNFHL

Query:  IATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRR
        IA +D +YT  VDLDP + +  VR GAP S IERLM EKYD  NG EEM D+C VCYEDLH + E+EK EV+RIPCGH++HKSCILKWLKI+NSCPLCR 
Subjt:  IATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRR

Query:  E
        E
Subjt:  E

XP_011652885.1 RING-H2 finger protein ATL66 [Cucumis sativus]3.1e-7584.21Show/hide
Query:  IQQTSPTPISDALFHFPLPELELENPPF---FFLQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPASV
        IQQT PT IS+ALFHFPLPELELENP     F LQFLSPA SAAIFHNISSFALQLAAGN+NLNFHLIATVDLLYTIS+  +L+PPQYSPPVRNG PASV
Subjt:  IQQTSPTPISDALFHFPLPELELENPPF---FFLQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPASV

Query:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF
        +ERLMNEKYDD NG E MG QCCVCYEDL+CEREEEKEE TRIPCGHVYHKSCILKWL +NNSCPLCR EF
Subjt:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF

XP_031740500.1 E3 ubiquitin-protein ligase At1g63170-like [Cucumis sativus]3.9e-4656.25Show/hide
Query:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPP----FFFLQFL-----SPAGSAAIFHNISSFALQL---AAGNINLN
        T G P++ +Q       Q+  +  Q I+QQTSPT ISD L  F L   ELE+PP    FF  +FL     S A   AIF+NISSFA Q+   A  NIN+N
Subjt:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPP----FFFLQFL-----SPAGSAAIFHNISSFALQL---AAGNINLN

Query:  FHLIATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMG-DQCCVCYEDLHCEREEEKE---EVTRIPCGHVYHKSCILKWLKINN
        FH+IA VD++YT  VDLDP + +P VR GA  SVIER+M EKYD   G E+ G DQC VCYE L+ +RE E E   EV+RIPCGH+YHKSCILKWLKI+N
Subjt:  FHLIATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMG-DQCCVCYEDLHCEREEEKE---EVTRIPCGHVYHKSCILKWLKINN

Query:  SCPLCRRE
        SCPLCRRE
Subjt:  SCPLCRRE

TrEMBL top hitse value%identityAlignment
A0A0A0L3Z2 RING-type domain-containing protein1.9e-4656.25Show/hide
Query:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPP----FFFLQFL-----SPAGSAAIFHNISSFALQL---AAGNINLN
        T G P++ +Q       Q+  +  Q I+QQTSPT ISD L  F L   ELE+PP    FF  +FL     S A   AIF+NISSFA Q+   A  NIN+N
Subjt:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPP----FFFLQFL-----SPAGSAAIFHNISSFALQL---AAGNINLN

Query:  FHLIATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMG-DQCCVCYEDLHCEREEEKE---EVTRIPCGHVYHKSCILKWLKINN
        FH+IA VD++YT  VDLDP + +P VR GA  SVIER+M EKYD   G E+ G DQC VCYE L+ +RE E E   EV+RIPCGH+YHKSCILKWLKI+N
Subjt:  FHLIATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMG-DQCCVCYEDLHCEREEEKE---EVTRIPCGHVYHKSCILKWLKINN

Query:  SCPLCRRE
        SCPLCRRE
Subjt:  SCPLCRRE

A0A0A0LHI3 RING-type domain-containing protein1.5e-7584.21Show/hide
Query:  IQQTSPTPISDALFHFPLPELELENPPF---FFLQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPASV
        IQQT PT IS+ALFHFPLPELELENP     F LQFLSPA SAAIFHNISSFALQLAAGN+NLNFHLIATVDLLYTIS+  +L+PPQYSPPVRNG PASV
Subjt:  IQQTSPTPISDALFHFPLPELELENPPF---FFLQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPASV

Query:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF
        +ERLMNEKYDD NG E MG QCCVCYEDL+CEREEEKEE TRIPCGHVYHKSCILKWL +NNSCPLCR EF
Subjt:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF

A0A0A0LRB0 RING-type domain-containing protein2.9e-4756.72Show/hide
Query:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPPFF-------FLQF--LSPAGSAAIFHNISSFALQLAAGNINLNFHL
        T G P++ ++       Q+ +S    I+QQTSP  ISD L  FPL   ELE+PPF        FL    +S A   AIF  ISSFA QL AGN+N NFH+
Subjt:  TRGNPIKEIQ-------QISVSIFQPIIQQTSPTPISDALFHFPLPELELENPPFF-------FLQF--LSPAGSAAIFHNISSFALQLAAGNINLNFHL

Query:  IATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRR
        IA +D +YT  VDLDP + +  VR GAP S IERLM EKYD  NG EEM D+C VCYEDLH + E+EK EV+RIPCGH++HKSCILKWLKI+NSCPLCR 
Subjt:  IATVDLLYTISVDLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRR

Query:  E
        E
Subjt:  E

A0A1S3CR16 E3 ubiquitin-protein ligase synoviolin B-like3.1e-8190.23Show/hide
Query:  IIQQTSPTPISDALFHFPLPELELENPPFFF----LQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPA
        IIQQT PTPISDALFHFPLPELELENPPFFF    LQFLSPA S AIFHNISSFALQLAAGN+NLNFHLIATVDLLYTISV  DLDPPQYSP VRNGAPA
Subjt:  IIQQTSPTPISDALFHFPLPELELENPPFFF----LQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPA

Query:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEK-EEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF
        SVIERLM+EKYDD NGREEMGDQCCVCYEDL+CEREEEK EEVTRIPCGHVYHK CILKWL INNSCPLCRREF
Subjt:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEK-EEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF

A0A5A7T784 E3 ubiquitin-protein ligase synoviolin B-like3.1e-8190.23Show/hide
Query:  IIQQTSPTPISDALFHFPLPELELENPPFFF----LQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPA
        IIQQT PTPISDALFHFPLPELELENPPFFF    LQFLSPA S AIFHNISSFALQLAAGN+NLNFHLIATVDLLYTISV  DLDPPQYSP VRNGAPA
Subjt:  IIQQTSPTPISDALFHFPLPELELENPPFFF----LQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV--DLDPPQYSPPVRNGAPA

Query:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEK-EEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF
        SVIERLM+EKYDD NGREEMGDQCCVCYEDL+CEREEEK EEVTRIPCGHVYHK CILKWL INNSCPLCRREF
Subjt:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEK-EEVTRIPCGHVYHKSCILKWLKINNSCPLCRREF

SwissProt top hitse value%identityAlignment
O22283 Probable E3 ubiquitin-protein ligase RHC2A4.4e-0838.67Show/hide
Query:  APASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE
        A  S IE L   + D  +   +    C VC E+        K     +PC H+YH  CIL WL I NSCP+CR E
Subjt:  APASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE

P0CH30 E3 ubiquitin-protein ligase RING17.3e-1141.38Show/hide
Query:  DPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE
        DP +Y  P    A  S IE L        N   E  +QC VC +D      EE  E  ++PC H+YHK C+L WL+++NSCP+CR E
Subjt:  DPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE

Q8LPN7 E3 ubiquitin-protein ligase RING1-like3.0e-0931.18Show/hide
Query:  QPIIQQTSPTPISDALFHFPLPELELENPPFFFLQFLSPAGS--AAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISVDLDPPQYSPPVRNGAPASV
        QP  + T   P SDA   F      L+N     LQ L  +G+    +  N  S       GN    F       L+  ++ + DP +Y  P    A  S 
Subjt:  QPIIQQTSPTPISDALFHFPLPELELENPPFFFLQFLSPAGS--AAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISVDLDPPQYSPPVRNGAPASV

Query:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE
        I+ L   K      + EM +QC VC ++      E+  +V ++PC HV+H+ C+L WL+++NSCP+CR E
Subjt:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE

Q9Y4L5 E3 ubiquitin-protein ligase RNF1152.6e-0845.28Show/hide
Query:  EMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRR
        +MG +C VC ED   E     EEV ++PC H +H SCI+ WL+++++CP+CR+
Subjt:  EMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRR

Q9Y7K6 Uncharacterized RING finger protein C2A9.04c5.2e-0930.12Show/hide
Query:  YSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE
        + PPV+     +       + ++  +  + M   C +CY+D++   E ++++ T++PCGH++ K+C+ KWL+ + +CPLCR+E
Subjt:  YSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE

Arabidopsis top hitse value%identityAlignment
AT1G45180.1 RING/U-box superfamily protein1.3e-1037.14Show/hide
Query:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCR
        ++  RL  +KY       +  + CCVC E+      +E+EE+ R+ CGH +H  CI +WLK  N CP+C+
Subjt:  SVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCR

AT1G60360.1 RING/U-box superfamily protein2.6e-1137.5Show/hide
Query:  PPQYSPPVRNGAPASVI--ERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE
        PP  S P  N  P+  I  + L N+             QC VC E+          + T +PC H+YHK CI+ WL++NNSCP+CRR+
Subjt:  PPQYSPPVRNGAPASVI--ERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE

AT3G19950.1 RING/U-box superfamily protein2.2e-1031.18Show/hide
Query:  QPIIQQTSPTPISDALFHFPLPELELENPPFFFLQFLSPAGS--AAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISVDLDPPQYSPPVRNGAPASV
        QP  + T   P SDA   F      L+N     LQ L  +G+    +  N  S       GN    F       L+  ++ + DP +Y  P    A  S 
Subjt:  QPIIQQTSPTPISDALFHFPLPELELENPPFFFLQFLSPAGS--AAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISVDLDPPQYSPPVRNGAPASV

Query:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE
        I+ L   K      + EM +QC VC ++      E+  +V ++PC HV+H+ C+L WL+++NSCP+CR E
Subjt:  IERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE

AT5G37200.1 RING/U-box superfamily protein2.8e-1036.84Show/hide
Query:  GAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIP-CGHVYHKSCILKWLKINNSCPLCRR
        GA   V  RL+ E+  +    EE  + C +C E       E  E++ R+P C H++H+ C+ +WL + NSCPLCR+
Subjt:  GAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIP-CGHVYHKSCILKWLKINNSCPLCRR

AT5G67120.1 RING/U-box superfamily protein2.8e-1039.24Show/hide
Query:  RNGAPASVI-ERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE
        R G    VI E L+  KY+ R+  E    +C +C + L     ++ EEV+++ CGH +H  CI  WL + N CPLC RE
Subjt:  RNGAPASVI-ERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATATTCACAGCAGCGGCGCCACCACCGCAGACGAACAACTCGTGGAAATCCGATTAAGGAGATACAGCAAATTAGTGTCTCCATCTTCCAACCAATCATCCAACA
AACTTCCCCAACTCCGATTTCCGATGCTCTGTTTCACTTTCCTCTGCCGGAGCTTGAACTTGAAAACCCACCCTTCTTCTTCCTTCAATTCCTCTCTCCGGCTGGCTCCG
CCGCCATATTCCACAACATCTCCTCCTTCGCCCTTCAATTGGCTGCCGGGAACATCAATCTCAACTTCCACCTCATCGCCACTGTGGATTTACTCTACACGATCTCGGTG
GACCTGGACCCACCACAATATTCACCGCCGGTGAGGAATGGGGCACCGGCGTCGGTCATCGAGAGGCTAATGAATGAGAAATATGATGATCGGAATGGGCGGGAAGAGAT
GGGAGATCAATGCTGCGTTTGTTATGAGGATCTCCACTGTGAAAGGGAAGAGGAAAAGGAGGAAGTGACAAGAATCCCCTGCGGGCACGTCTATCACAAGTCCTGTATTC
TCAAATGGCTCAAAATCAACAATTCATGTCCTTTGTGCAGAAGGGAATTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
CCATCACCATGTCTTCCACTACGACTATGTCTCTTGAATGCTATATTCACAGCAGCGGCGCCACCACCGCAGACGAACAACTCGTGGAAATCCGATTAAGGAGATACAGC
AAATTAGTGTCTCCATCTTCCAACCAATCATCCAACAAACTTCCCCAACTCCGATTTCCGATGCTCTGTTTCACTTTCCTCTGCCGGAGCTTGAACTTGAAAACCCACCC
TTCTTCTTCCTTCAATTCCTCTCTCCGGCTGGCTCCGCCGCCATATTCCACAACATCTCCTCCTTCGCCCTTCAATTGGCTGCCGGGAACATCAATCTCAACTTCCACCT
CATCGCCACTGTGGATTTACTCTACACGATCTCGGTGGACCTGGACCCACCACAATATTCACCGCCGGTGAGGAATGGGGCACCGGCGTCGGTCATCGAGAGGCTAATGA
ATGAGAAATATGATGATCGGAATGGGCGGGAAGAGATGGGAGATCAATGCTGCGTTTGTTATGAGGATCTCCACTGTGAAAGGGAAGAGGAAAAGGAGGAAGTGACAAGA
ATCCCCTGCGGGCACGTCTATCACAAGTCCTGTATTCTCAAATGGCTCAAAATCAACAATTCATGTCCTTTGTGCAGAAGGGAATTTTGTTGA
Protein sequenceShow/hide protein sequence
MLYSQQRRHHRRRTTRGNPIKEIQQISVSIFQPIIQQTSPTPISDALFHFPLPELELENPPFFFLQFLSPAGSAAIFHNISSFALQLAAGNINLNFHLIATVDLLYTISV
DLDPPQYSPPVRNGAPASVIERLMNEKYDDRNGREEMGDQCCVCYEDLHCEREEEKEEVTRIPCGHVYHKSCILKWLKINNSCPLCRREFC