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PI0021032 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021032
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:14776995..14777159
RNA-Seq ExpressionPI0021032
SyntenyPI0021032
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-1577.78Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
        M N D+ ++ DE DST+ATTA+DDIHYIETSNEWSQWRDDLAEE+F+EWELRNQ
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
KAA0060531.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.1e-1577.36Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
        M+NAD+++D DEGDSTYATT  DDIHYIETSN+W QW+DDLA+EIFSEW LRN
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-1577.78Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
        M N D+ ++ DE DST+ATTA+DDIHYIETSNEWSQWRDDLAEE+F+EWELRNQ
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-1577.78Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
        M N D+ ++ DE DST+ATTA+DDIHYIETSNEWSQWRDDLAEE+F+EWELRNQ
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
TYK00771.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.1e-1577.36Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
        M+NAD+++D DEGDSTYATT  DDIHYIETSN+W QW+DDLA+EIFSEW LRN
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein1.4e-1577.78Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
        M N D+ ++ DE DST+ATTA+DDIHYIETSNEWSQWRDDLAEE+F+EWELRNQ
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
A0A5A7UGH9 Retrotransposon protein1.4e-1577.78Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
        M N D+ ++ DE DST+ATTA+DDIHYIETSNEWSQWRDDLAEE+F+EWELRNQ
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
A0A5A7V485 Putative nuclease HARBI11.0e-1577.36Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
        M+NAD+++D DEGDSTYATT  DDIHYIETSN+W QW+DDLA+EIFSEW LRN
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
A0A5D3BLS5 Putative nuclease HARBI11.0e-1577.36Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
        M+NAD+++D DEGDSTYATT  DDIHYIETSN+W QW+DDLA+EIFSEW LRN
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRN
A0A5D3D9Z3 Retrotransposon protein1.4e-1577.78Show/hide
Query:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
        M N D+ ++ DE DST+ATTA+DDIHYIETSNEWSQWRDDLAEE+F+EWELRNQ
Subjt:  MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAACGCTGATGTGACAGAGGATTACGACGAGGGTGATTCGACGTACGCAACAACTGCAAGTGATGACATTCACTACATTGAAACCTCCAATGAATGGAGTCAGTG
GAGGGATGATTTGGCCGAAGAAATATTCAGTGAATGGGAATTACGTAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAACGCTGATGTGACAGAGGATTACGACGAGGGTGATTCGACGTACGCAACAACTGCAAGTGATGACATTCACTACATTGAAACCTCCAATGAATGGAGTCAGTG
GAGGGATGATTTGGCCGAAGAAATATTCAGTGAATGGGAATTACGTAATCAGTAG
Protein sequenceShow/hide protein sequence
MVNADVTEDYDEGDSTYATTASDDIHYIETSNEWSQWRDDLAEEIFSEWELRNQ