; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021121 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021121
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA polymerase epsilon subunit C
Genome locationchr11:5859077..5864712
RNA-Seq ExpressionPI0021121
SyntenyPI0021121
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035335.1 DNA polymerase epsilon subunit C [Cucumis melo var. makuwa]3.3e-7892.51Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK
        MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDNE LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVK
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK

Query:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSV
        RNHAK+E+NGYA EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLAYKHL +V
Subjt:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSV

XP_004149539.2 chromatin accessibility complex protein 1 isoform X1 [Cucumis sativus]2.8e-9391.48Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKK--ISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKK
        MASSKKSSTEAKSKE GTSKP+PKAK+HNNARNSDKD SKKKKKKKK  ISISTNNGSVKDN ALAVSAPG SASED DAADEDKAETTSRK  TSK KK
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKK--ISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKK

Query:  VKRNHAKKEENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSD
        VKRNHAK+E+N YA  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLAYKHLSSVVSKRKRYDFLSD
Subjt:  VKRNHAKKEENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSD

Query:  FVPEKLKFEDALKERSMAELGKD
        FVPEKLKFEDALKERSMAE GKD
Subjt:  FVPEKLKFEDALKERSMAELGKD

XP_008463933.1 PREDICTED: DNA polymerase epsilon subunit C [Cucumis melo]2.2e-9894.14Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK
        MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDNE LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVK
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK

Query:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
        RNHAK+E+NGYA EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
Subjt:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF

Query:  VPEKLKFEDALKERSMAELGKD
        VPEKLKFEDALKERSMAE GKD
Subjt:  VPEKLKFEDALKERSMAELGKD

XP_022986059.1 DNA polymerase epsilon subunit C-like isoform X1 [Cucurbita maxima]1.1e-7675.85Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSH-------NNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKT
        MASSKKSS+EAKSKEAGTSKPAPK K+H       NNAR  DK  SKKKK     +  T+NGSVK+NE L +SAPG         A+ED+ ETTS+ P T
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSH-------NNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKT

Query:  SKLKKVKRNHAKKEENGYAEE--------EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSS
        SK KKVKRNH KKEENGYAEE        EEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAY CCAQDRKKSLAYKHLSS
Subjt:  SKLKKVKRNHAKKEENGYAEE--------EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSS

Query:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD
        VV KRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Subjt:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD

XP_038902902.1 DNA polymerase epsilon subunit C [Benincasa hispida]5.9e-8886.49Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK
        MASSKKSSTEAKSKEAGTSKP PK K+HNNAR SDKDDS KKKKKKK  IST NGSVKDNEALA S PG +++ ++  ADED+AETTS KP TSK KKV+
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK

Query:  RNHAKKEENGY-AEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
        RNH KKEENGY AEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLAYKHLSSVV KRKRYDFLSDF
Subjt:  RNHAKKEENGY-AEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF

Query:  VPEKLKFEDALKERSMAELGKD
        VPEKLKFEDALKER+MAE GKD
Subjt:  VPEKLKFEDALKERSMAELGKD

TrEMBL top hitse value%identityAlignment
A0A0A0KCQ2 CBFD_NFYB_HMF domain-containing protein1.3e-9391.48Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKK--ISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKK
        MASSKKSSTEAKSKE GTSKP+PKAK+HNNARNSDKD SKKKKKKKK  ISISTNNGSVKDN ALAVSAPG SASED DAADEDKAETTSRK  TSK KK
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKK--ISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKK

Query:  VKRNHAKKEENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSD
        VKRNHAK+E+N YA  EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLAYKHLSSVVSKRKRYDFLSD
Subjt:  VKRNHAKKEENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSD

Query:  FVPEKLKFEDALKERSMAELGKD
        FVPEKLKFEDALKERSMAE GKD
Subjt:  FVPEKLKFEDALKERSMAELGKD

A0A1S3CKU7 DNA polymerase epsilon subunit C1.1e-9894.14Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK
        MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDNE LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVK
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK

Query:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
        RNHAK+E+NGYA EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF
Subjt:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDF

Query:  VPEKLKFEDALKERSMAELGKD
        VPEKLKFEDALKERSMAE GKD
Subjt:  VPEKLKFEDALKERSMAELGKD

A0A5A7T1L3 DNA polymerase epsilon subunit C1.6e-7892.51Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK
        MASSKKSSTEAK KEAGTSKPAPKAK+HNNARNSDK+ SKKKKKKKKISISTNNGSVKDNE LAVS PGGSASEDDDAADEDKAETTSRK KTSK KKVK
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVK

Query:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSV
        RNHAK+E+NGYA EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAY CCAQDRKKSLAYKHL +V
Subjt:  RNHAKKEENGYA-EEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSV

A0A6J1FVY8 DNA polymerase epsilon subunit C-like isoform X13.6e-7577.88Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSH-NNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKV
        MASSKKSS+EAKSKEAGTSKPAP  K+H NNAR  DK  SKKKK     +  T+NGSVK+NE L +SAPG         A+ED+AETTS+ P TSK KKV
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSH-NNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKV

Query:  KRNHAKKEENGYAEE----EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDF
        KRN  KKE+NGY EE    EEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAY CCAQDRKKSLAYKHLSSVV KRKRYDF
Subjt:  KRNHAKKEENGYAEE----EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDF

Query:  LSDFVPEKLKFEDALKERSMAELGKD
        LSDFVPEKLKFEDALKERSMAE GKD
Subjt:  LSDFVPEKLKFEDALKERSMAELGKD

A0A6J1JF10 DNA polymerase epsilon subunit C-like isoform X15.1e-7775.85Show/hide
Query:  MASSKKSSTEAKSKEAGTSKPAPKAKSH-------NNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKT
        MASSKKSS+EAKSKEAGTSKPAPK K+H       NNAR  DK  SKKKK     +  T+NGSVK+NE L +SAPG         A+ED+ ETTS+ P T
Subjt:  MASSKKSSTEAKSKEAGTSKPAPKAKSH-------NNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKT

Query:  SKLKKVKRNHAKKEENGYAEE--------EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSS
        SK KKVKRNH KKEENGYAEE        EEEAEEKIYKFPM+RIKKIMRDENSDLRINQEALFLVNKA+EMFLVQFCKDAY CCAQDRKKSLAYKHLSS
Subjt:  SKLKKVKRNHAKKEENGYAEE--------EEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSS

Query:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD
        VV KRKRYDFLSDFVPEKLKFEDALKERSMAE GKD
Subjt:  VVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGKD

SwissProt top hitse value%identityAlignment
P79007 Transcriptional activator hap51.1e-0431.46Show/hide
Query:  EEEEAEEKIYKFPMHRIKKIMR--DENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFV
        E ++   K    P+ RIKK+M+  D+  +  I+ EA FL  K SE+F+ +    A+    ++++++L    +++ VSK + YDFL D +
Subjt:  EEEEAEEKIYKFPMHRIKKIMR--DENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFV

Q8LCG7 Nuclear transcription factor Y subunit C-26.5e-0528.97Show/hide
Query:  NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED
        N   E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ +S+   +DFL D +P      D
Subjt:  NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED

Query:  ALKERSM
         LKE  +
Subjt:  ALKERSM

Q9JKP8 Chromatin accessibility complex protein 15.9e-0631.78Show/hide
Query:  EEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDAL
        +E+  ++++   P+ RI+ IM+       INQEAL L  KA+E+F+      +Y   +   KK+L Y  L+S     +   FL+D +P+K+   K+   L
Subjt:  EEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDAL

Query:  KERSMAE
        KE+   E
Subjt:  KERSMAE

Q9NRG0 Chromatin accessibility complex protein 14.5e-0630.84Show/hide
Query:  EEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDAL
        +++  E+++   P+ RI+ IM+       INQEAL L  KA+E+F+      +Y   +   KK L Y  L++   + + + FL+D +P+K+   K+   L
Subjt:  EEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKL---KFEDAL

Query:  KERSMAE
        KE    E
Subjt:  KERSMAE

Q9V452 Chromatin accessibility complex 16kD protein4.5e-0635.56Show/hide
Query:  PMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYT-CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLK---FEDALK
        P+ R++ IM+       I  E LFL+ K +E+F+      AYT    Q   ++L Y+HLS VV+K K  +FL   VP+K++   F++ L+
Subjt:  PMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYT-CCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLK---FEDALK

Arabidopsis top hitse value%identityAlignment
AT1G07980.1 nuclear factor Y, subunit C101.4e-1837.21Show/hide
Query:  SSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKK
        SS + K K+A +     KA    + R+     S+ KK   K++I      + +   ++ S+   S  E     +  K+     K    K   +    +K 
Subjt:  SSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKK

Query:  EENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKF
         E    E++  AE+   KFPM+RI++IMR +NS  +I Q+A+FLVNKA+EMF+ +F ++AY    +D+KK + YKHLSSVVS  +RY+FL+D VPEKLK 
Subjt:  EENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKF

Query:  EDALK--ERSMAELG
        E AL+  ER M + G
Subjt:  EDALK--ERSMAELG

AT1G08970.1 nuclear factor Y, subunit C97.9e-0628.12Show/hide
Query:  ENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK
        EN + E E+  + K +  P+ RIKKIM+ +     I+ EA  +  +A EMF+++    ++    ++++++L    +++ V++   +DFL D VP +
Subjt:  ENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK

AT1G08970.4 nuclear factor Y, subunit C97.9e-0628.12Show/hide
Query:  ENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK
        EN + E E+  + K +  P+ RIKKIM+ +     I+ EA  +  +A EMF+++    ++    ++++++L    +++ V++   +DFL D VP +
Subjt:  ENGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEK

AT1G56170.1 nuclear factor Y, subunit C24.6e-0628.97Show/hide
Query:  NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED
        N   E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ +S+   +DFL D +P      D
Subjt:  NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED

Query:  ALKERSM
         LKE  +
Subjt:  ALKERSM

AT1G56170.2 nuclear factor Y, subunit C24.6e-0628.97Show/hide
Query:  NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED
        N   E E   + K +  P+ RIKKIM+ +     I+ EA  +  KA EMF+++    A+    ++++++L    +++ +S+   +DFL D +P      D
Subjt:  NGYAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFED

Query:  ALKERSM
         LKE  +
Subjt:  ALKERSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCCAAAAAATCAAGTACTGAAGCGAAGAGTAAAGAAGCGGGAACCTCAAAGCCAGCCCCCAAAGCCAAGAGCCACAACAATGCCAGAAATTCCGACAAGGA
CGATTCAAAGAAGAAGAAGAAGAAGAAGAAGATTAGCATTAGCACCAACAATGGCTCTGTCAAGGACAATGAGGCCTTAGCTGTTTCTGCTCCAGGAGGCTCAGCCTCTG
AGGACGACGATGCCGCCGATGAAGACAAAGCCGAAACCACAAGTAGAAAACCTAAGACCTCCAAATTGAAGAAAGTTAAACGGAACCATGCCAAGAAAGAAGAAAATGGT
TATGCCGAAGAAGAAGAAGAAGCTGAGGAGAAGATTTATAAATTTCCTATGCATCGGATCAAGAAAATCATGAGGGATGAAAATTCTGATTTGCGTATTAATCAGGAAGC
TTTGTTTCTCGTCAACAAAGCTTCGGAGATGTTTCTCGTACAATTTTGCAAAGATGCATATACATGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTTACAAGCATCTAT
CATCAGTAGTTTCAAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTTCCAGAGAAGTTAAAATTCGAAGATGCGTTAAAGGAAAGAAGCATGGCAGAATTAGGAAAG
GACTAG
mRNA sequenceShow/hide mRNA sequence
CGAACATTACCAATGGCATCATCCAAAAAATCAAGTACTGAAGCGAAGAGTAAAGAAGCGGGAACCTCAAAGCCAGCCCCCAAAGCCAAGAGCCACAACAATGCCAGAAA
TTCCGACAAGGACGATTCAAAGAAGAAGAAGAAGAAGAAGAAGATTAGCATTAGCACCAACAATGGCTCTGTCAAGGACAATGAGGCCTTAGCTGTTTCTGCTCCAGGAG
GCTCAGCCTCTGAGGACGACGATGCCGCCGATGAAGACAAAGCCGAAACCACAAGTAGAAAACCTAAGACCTCCAAATTGAAGAAAGTTAAACGGAACCATGCCAAGAAA
GAAGAAAATGGTTATGCCGAAGAAGAAGAAGAAGCTGAGGAGAAGATTTATAAATTTCCTATGCATCGGATCAAGAAAATCATGAGGGATGAAAATTCTGATTTGCGTAT
TAATCAGGAAGCTTTGTTTCTCGTCAACAAAGCTTCGGAGATGTTTCTCGTACAATTTTGCAAAGATGCATATACATGCTGTGCTCAGGATCGCAAGAAGTCTCTTGCTT
ACAAGCATCTATCATCAGTAGTTTCAAAAAGGAAGAGATACGACTTTCTTTCAGATTTTGTTCCAGAGAAGTTAAAATTCGAAGATGCGTTAAAGGAAAGAAGCATGGCA
GAATTAGGAAAGGACTAGACTTCTCGATATTTTAATTTGAACACTTAATCTTGTTCCATGGATGTGTTATATATTTAGGTATCTTTCTTGTCATGTCAATGTGAATCCAA
GGAAGTTAGATACACCATACAACATACATTTTTTTAAAATTACGTACCTGTAACATGTTTATTGACATCTTAAATCTAATCTAACGTCCATTCTAACATGATTATTCTAA
TATGCATTTATTGAA
Protein sequenceShow/hide protein sequence
MASSKKSSTEAKSKEAGTSKPAPKAKSHNNARNSDKDDSKKKKKKKKISISTNNGSVKDNEALAVSAPGGSASEDDDAADEDKAETTSRKPKTSKLKKVKRNHAKKEENG
YAEEEEEAEEKIYKFPMHRIKKIMRDENSDLRINQEALFLVNKASEMFLVQFCKDAYTCCAQDRKKSLAYKHLSSVVSKRKRYDFLSDFVPEKLKFEDALKERSMAELGK
D