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PI0021134 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021134
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCBFD_NFYB_HMF domain-containing protein
Genome locationchr03:5849852..5850274
RNA-Seq ExpressionPI0021134
SyntenyPI0021134
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064731.1 dr1-associated corepressor [Cucumis melo var. makuwa]1.7e-6497.14Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKR RSISDFLLDSLPLPSQPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENR RAVVDKVAP GTRRIDDFFRRPTKTTSAETNES
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

XP_004144200.1 DNA polymerase epsilon subunit C [Cucumis sativus]1.8e-6196.35Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        MEEEE GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAE AAEKKRKTVKLEHIRMAVKR RSISDFLLDSLPLPSQPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAET
        AKDENRTRAVVDKVAPEGTRRIDDFFRR TKT SAET
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAET

XP_008445504.1 PREDICTED: dr1-associated corepressor [Cucumis melo]8.4e-6497.14Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKR RSISDFLLDSLPLPSQPSDA 
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENR RAVVDKVAP GTRRIDDFFRRPTKTTSAETNES
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

XP_022997291.1 DNA polymerase epsilon subunit C [Cucurbita maxima]1.5e-6091.43Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKSAEVAAEKKRKTVKLEHIR+AVKR +SISDFLLDSLPLPSQPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENRTR VVDKVAPEGTRRIDDFFRRP KT SAETNE+
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

XP_038884228.1 NCT transcriptional regulatory complex subunit A [Benincasa hispida]5.1e-6192.86Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        M EEESG+AIRPEFPTGRVKKIMKLDKDI KVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR+AVKR RSISDFLLDSLPLP QPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENRTR VVDKV PEGTRRIDDFFRRP KTTSAE NES
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

TrEMBL top hitse value%identityAlignment
A0A0A0KGV1 CBFD_NFYB_HMF domain-containing protein8.5e-6296.35Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        MEEEE GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAE AAEKKRKTVKLEHIRMAVKR RSISDFLLDSLPLPSQPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAET
        AKDENRTRAVVDKVAPEGTRRIDDFFRR TKT SAET
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAET

A0A1S3BDL4 dr1-associated corepressor4.1e-6497.14Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKR RSISDFLLDSLPLPSQPSDA 
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENR RAVVDKVAP GTRRIDDFFRRPTKTTSAETNES
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

A0A5A7VG98 Dr1-associated corepressor8.2e-6597.14Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKR RSISDFLLDSLPLPSQPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENR RAVVDKVAP GTRRIDDFFRRPTKTTSAETNES
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

A0A6J1HCT3 DNA polymerase epsilon subunit C4.7e-6090Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKS+EVAAEKKRKTVKLEHIR+AVKR +SI DFLLDSLPLPSQPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENRTR VVDKVAPEGTRRIDDFFRRP KT SAETNE+
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

A0A6J1K737 DNA polymerase epsilon subunit C7.2e-6191.43Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKSAEVAAEKKRKTVKLEHIR+AVKR +SISDFLLDSLPLPSQPSDAP
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES
        AKDENRTR VVDKVAPEGTRRIDDFFRRP KT SAETNE+
Subjt:  AKDENRTRAVVDKVAPEGTRRIDDFFRRPTKTTSAETNES

SwissProt top hitse value%identityAlignment
B0XTT5 NCT transcriptional regulatory complex subunit A2.6e-0732.76Show/hide
Query:  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSL-PLPSQPSDAPAKDENRTR
        ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V   H++ AV  +  + DFL D +  +P QP+     D++ + 
Subjt:  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSL-PLPSQPSDAPAKDENRTR

Query:  AVVDKVAPEGTRRIDD
                 G RR  D
Subjt:  AVVDKVAPEGTRRIDD

Q14919 Dr1-associated corepressor2.2e-0637.33Show/hide
Query:  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLD
        FP  R+KKIM+ D++IGKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++  ++  +   DFL D
Subjt:  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLD

Q2YDP3 Dr1-associated corepressor2.2e-0637.33Show/hide
Query:  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLD
        FP  R+KKIM+ D++IGKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++  ++  +   DFL D
Subjt:  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLD

Q4X095 NCT transcriptional regulatory complex subunit A2.6e-0732.76Show/hide
Query:  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSL-PLPSQPSDAPAKDENRTR
        ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V   H++ AV  +  + DFL D +  +P QP+     D++ + 
Subjt:  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSL-PLPSQPSDAPAKDENRTR

Query:  AVVDKVAPEGTRRIDD
                 G RR  D
Subjt:  AVVDKVAPEGTRRIDD

Q9W256 DNA polymerase epsilon subunit 41.3e-0639.13Show/hide
Query:  EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAV
        EA   + P  R++ IMKLD D+   N+EA+F+V+ A ELF+  L+ +S    A+ K+KT++   + MA+
Subjt:  EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAV

Arabidopsis top hitse value%identityAlignment
AT1G07980.1 nuclear factor Y, subunit C105.9e-0730.77Show/hide
Query:  EEEESG-EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLP
        EE++ G E  + +FP  R+++IM+ D    ++  +A+FLV+ ATE+F++  +E++ + + + K+K +  +H+   V   +   +FL DS+P
Subjt:  EEEESG-EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLP

AT3G12480.1 nuclear factor Y, subunit C111.2e-0741.1Show/hide
Query:  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFL
        FP  R+KKIM+ D+D+GK+      LVS + ELFL+ L +++ E+  E+  KTV   H++  V+ R ++ DFL
Subjt:  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFL

AT5G19490.1 Histone superfamily protein1.6e-0733.33Show/hide
Query:  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAPAKDENRT--
        ++  FP  R+KKIM+ D+++GK+      LVS A ELFL+ L   + +V   +  KTV   H++  V +  ++ DFL D++        +  +D++ T  
Subjt:  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAPAKDENRT--

Query:  RAVVD
        R VVD
Subjt:  RAVVD

AT5G27910.1 nuclear factor Y, subunit C88.6e-0636.79Show/hide
Query:  EFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVD
        + P  R+KKIMK D D+  + SEA  L+S A E+F+  L  +S   A E KR T++  ++  AV  +  I DFLLD      + S A A D      + D
Subjt:  EFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVD

Query:  KVAPEG
           P G
Subjt:  KVAPEG

AT5G43250.1 nuclear factor Y, subunit C131.8e-3563.31Show/hide
Query:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP
        MEEEE   +IRPEFP GRVKKIMKLDKDI K+NSEAL +++ +TELFL  LAEKSA V AEKKRKTV L+H+R+AVKR +  SDFLLDSLPLP+QP    
Subjt:  MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAP

Query:  AKDENRTRAVVDK---VAPEGTRRIDDFFRR-PTKTTSA
              T++V DK     P GTRRIDDFF +   KT SA
Subjt:  AKDENRTRAVVDK---VAPEGTRRIDDFFRR-PTKTTSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCGGAATTTCCGACGGGACGAGTGAAGAAGATAATGAAGCTCGACAAGGACATCGGCAAAGTGAATTCAGAAGCCTT
GTTTCTAGTCTCATGCGCCACCGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAA
TGGCCGTCAAAAGGCGTCGCTCGATCAGTGATTTTCTTCTCGATTCGCTTCCTCTACCGTCTCAGCCGTCGGATGCACCGGCGAAGGACGAGAATCGCACTCGCGCTGTC
GTTGATAAAGTGGCTCCTGAAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCGGAATTTCCGACGGGACGAGTGAAGAAGATAATGAAGCTCGACAAGGACATCGGCAAAGTGAATTCAGAAGCCTT
GTTTCTAGTCTCATGCGCCACCGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAA
TGGCCGTCAAAAGGCGTCGCTCGATCAGTGATTTTCTTCTCGATTCGCTTCCTCTACCGTCTCAGCCGTCGGATGCACCGGCGAAGGACGAGAATCGCACTCGCGCTGTC
GTTGATAAAGTGGCTCCTGAAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG
Protein sequenceShow/hide protein sequence
MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRRRSISDFLLDSLPLPSQPSDAPAKDENRTRAV
VDKVAPEGTRRIDDFFRRPTKTTSAETNES