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PI0021142 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021142
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription termination factor MTERF5
Genome locationchr08:19128388..19130304
RNA-Seq ExpressionPI0021142
SyntenyPI0021142
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647485.1 hypothetical protein Csa_003016 [Cucumis sativus]7.0e-1463.64Show/hide
Query:  MEDNAWGEFCPLHTAAALARHRLSSCRRTLHSQLP--YNR--------------SYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
        MED   G   PLHTAAALAR RLS C RTLHSQLP  Y+               SYLSL FSLR TEVQPLHAVGEI PP  IVQIPK
Subjt:  MEDNAWGEFCPLHTAAALARHRLSSCRRTLHSQLP--YNR--------------SYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
TYK12947.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa]5.6e-1964.44Show/hide
Query:  NAWGEFCPLHTAAALARHRLSSCRRTLHSQLPY---------------------NRSYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
        N    F PLHTAA LARHRLS+CRRTLHSQLP                      NRSYLSLYFSLRNTEVQPLHAVGEI PP +IVQIPK
Subjt:  NAWGEFCPLHTAAALARHRLSSCRRTLHSQLPY---------------------NRSYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
TrEMBL top hitse value%identityAlignment
A0A0A0KJA2 Uncharacterized protein3.4e-1463.64Show/hide
Query:  MEDNAWGEFCPLHTAAALARHRLSSCRRTLHSQLP--YNR--------------SYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
        MED   G   PLHTAAALAR RLS C RTLHSQLP  Y+               SYLSL FSLR TEVQPLHAVGEI PP  IVQIPK
Subjt:  MEDNAWGEFCPLHTAAALARHRLSSCRRTLHSQLP--YNR--------------SYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
A0A5D3CLX7 Transcription termination factor MTERF52.7e-1964.44Show/hide
Query:  NAWGEFCPLHTAAALARHRLSSCRRTLHSQLPY---------------------NRSYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
        N    F PLHTAA LARHRLS+CRRTLHSQLP                      NRSYLSLYFSLRNTEVQPLHAVGEI PP +IVQIPK
Subjt:  NAWGEFCPLHTAAALARHRLSSCRRTLHSQLPY---------------------NRSYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACAACGCCTGGGGTGAGTTTTGTCCACTGCACACCGCCGCCGCTCTTGCCCGACACCGGCTCAGCAGCTGCCGCCGCACACTGCACTCTCAGCTGCCGTACAA
TCGGAGTTACTTATCTCTATATTTCTCTCTCAGAAACACAGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGTGCCGCCTCCGCTTATTGTTCAGATCCCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACAACGCCTGGGGTGAGTTTTGTCCACTGCACACCGCCGCCGCTCTTGCCCGACACCGGCTCAGCAGCTGCCGCCGCACACTGCACTCTCAGCTGCCGTACAA
TCGGAGTTACTTATCTCTATATTTCTCTCTCAGAAACACAGAGGTTCAGCCCCTCCACGCCGTTGGTGAGATCGTGCCGCCTCCGCTTATTGTTCAGATCCCCAAGTGA
Protein sequenceShow/hide protein sequence
MEDNAWGEFCPLHTAAALARHRLSSCRRTLHSQLPYNRSYLSLYFSLRNTEVQPLHAVGEIVPPPLIVQIPK