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PI0021151 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021151
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr11:23229275..23229730
RNA-Seq ExpressionPI0021151
SyntenyPI0021151
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]2.3e-5175.86Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG R SSS N  PSP+SA QY MDLGFT VTRS+ R S IWI SPTESSTPPRP  NL+RPSGGV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP
        TL+KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL+E VSK  P
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]7.0e-4873.1Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG+RLSSS N APSP+SADQYAMDLGFT VTRS+ R SGI I  PTESSTPPRP ANL+RP G V QM+P ASP SN +SSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP
        T +KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSK  P
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.2e-5075.86Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG+R  SS N APSP+SADQYAMDLGFTTVTR   RS GIWI SPTESSTPPRP  NL+RPS GV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP
        T +KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +ETVSK  P
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]4.5e-4774.13Show/hide
Query:  RVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAVTL
        R + TSS+G+R SSS N APSP+SADQYAMDLGFTTVTRS+ RSS I I SPT+SSTPPR  ANL+RPS  V QMRP ASPLSN ESSTPPTTYSQ +T 
Subjt:  RVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAVTL

Query:  EKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP
        +KRF+PR EIK+YFQK V +YD IIEPEYQSLTL+ETVSK  P
Subjt:  EKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]1.5e-4275.59Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG+R SSS N APSP+SADQY MDLGFTTV RS+ RSS I  ESPTESSTPPRP ANL+RPSG V QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPII
        T +KRF+PRP+IK+YFQK + +YDPII
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPII

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein5.6e-5175.86Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG+R  SS N APSP+SADQYAMDLGFTTVTR   RS GIWI SPTESSTPPRP  NL+RPS GV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP
        T +KRF+PRPEIK+YFQK + +YDPIIE EYQSLT +ETVSK  P
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP

A0A5A7UFZ9 Uncharacterized protein2.8e-4273.68Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG+R SSS N APSP+S DQYAM LGFTT+T+SK RSSGI I SPTES TPPRP ANL+RPSG V QMR   SPLSN ESSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQS
        T +KRF+PR EIK+YFQK   +YDPIIEP YQ+
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQS

A0A5D3CKX1 Uncharacterized protein7.3e-4375.59Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG+R SSS N APSP+SADQY MDLGFTTV RS+ RSS I  ESPTESSTPPRP ANL+RPSG V QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPII
        T +KRF+PRP+IK+YFQK + +YDPII
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPII

A0A5D3E4J4 Uncharacterized protein3.4e-4873.1Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG+RLSSS N APSP+SADQYAMDLGFT VTRS+ R SGI I  PTESSTPPRP ANL+RP G V QM+P ASP SN +SSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP
        T +KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E VSK  P
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP

E5GCE6 Uncharacterized protein1.1e-5175.86Show/hide
Query:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV
        RGR + TSSKG R SSS N  PSP+SA QY MDLGFT VTRS+ R S IWI SPTESSTPPRP  NL+RPSGGV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  RGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAV

Query:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP
        TL+KRF+PRPEIK+YFQK + +YDPIIEPEYQSLTL+E VSK  P
Subjt:  TLEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTTTACCTCTTCAAAGGGTAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATAAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGAAAGATCGTCCGGCATATGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTCCGGCCAATCTTG
TCCGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTACTGCCTCTCCTTTATCAAATATGGAGTCATCTACTCCTCCTACGACATATTCTCAGGCCGTCACTCTAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAAATCTTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTTTACCTCTTCAAAGGGTAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATAAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGAAAGATCGTCCGGCATATGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTCCGGCCAATCTTG
TCCGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTACTGCCTCTCCTTTATCAAATATGGAGTCATCTACTCCTCCTACGACATATTCTCAGGCCGTCACTCTAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAAATCTTCCCTGA
Protein sequenceShow/hide protein sequence
MSIVRGRGRVSFTSSKGSRLSSSPNPAPSPISADQYAMDLGFTTVTRSKERSSGIWIESPTESSTPPRPPANLVRPSGGVTQMRPTASPLSNMESSTPPTTYSQAVTLEK
RFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKNLP