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PI0021156 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021156
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationchr12:2254108..2256031
RNA-Seq ExpressionPI0021156
SyntenyPI0021156
Gene Ontology termsGO:0000380 - alternative mRNA splicing, via spliceosome (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64280.1 hypothetical protein Csa_013651 [Cucumis sativus]1.6e-4596.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_004152455.2 uncharacterized protein LOC101218501 isoform X2 [Cucumis sativus]1.6e-4596.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]1.6e-4597.87Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_031736912.1 uncharacterized protein LOC101218501 isoform X1 [Cucumis sativus]5.0e-4494.79Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEV--RVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEV  RV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEV--RVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
XP_038893556.1 uncharacterized protein LOC120082448 [Benincasa hispida]5.3e-4697.87Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVSKENRAAGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
TrEMBL top hitse value%identityAlignment
A0A0A0LQT3 Uncharacterized protein7.5e-4696.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A1S3AVT0 uncharacterized protein LOC1034832127.5e-4697.87Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A5A7UIX5 Uncharacterized protein7.5e-4697.87Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1C941 uncharacterized protein LOC1110090924.6e-4393.62Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPS+ +SRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVSKENR+AGVLDNFAEGEKY EHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
A0A6J1E888 uncharacterized protein LOC1114317082.7e-4393.62Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
        MAPS+ ++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein4.4e-2249.4Show/hide
Query:  LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+ R++KE+R  G+L+N  EGEKY +H  RK++R + P++MPS+N FF+
Subjt:  LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFT
AT3G48140.1 B12D protein4.1e-3681.18Show/hide
Query:  SRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPS
        SRWLRPEVYPLFAA GVAVGIC F LIRNI  NPEVR +KENRAAG+LDN AEGEKY E+FLRKFVRNK PEIMP +N FFTDP+
Subjt:  SRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGATTTCAGTTAATCCGTAACAT
CTGCATCAATCCTGAAGTCAGAGTGAGCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATACTGAACATTTCCTGAGGAAATTTGTAC
GCAACAAGTCCCCAGAAATTATGCCATCGATCAACAACTTCTTCACTGACCCAAGTCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
CAAGAAGTTACCCTACGATCCCGTGTCCGCAACTCAAACATTTGTCCAATTTTCAACAAATAATTGGCGGAACGGCGAGTAAAAAGCCGCATGTATAATTTTATTGGACG
AATAAAAAATTTATAAAAAATATATAAATATATAATTCCGAAATTCTCATCTTCTTCCCCCCACAAACTCTCCGATTCAGCCGCGTCTCAGCCTCGTCGATCCGCTTCCT
CCGCCGATATTCATCAATGGCTCCTTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCTGCGGATTTC
AGTTAATCCGTAACATCTGCATCAATCCTGAAGTCAGAGTGAGCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATACTGAACATTTC
CTGAGGAAATTTGTACGCAACAAGTCCCCAGAAATTATGCCATCGATCAACAACTTCTTCACTGACCCAAGTCGAAACTAAGAAGGCTATGAATGAATTACACATTAGTT
TGGATATAGATTTGAATTTGAATTGTTGGTGGGTTGGTGACTGTAAAAGTTAAAACTACGGTGCTTTTACGTTTGCTTTTATTGTTCATTTGAGAAAGTTTGAAAACAAT
GGATTGATGAAATAATAAACCATTCTGAACCAAAATTTAATTTCAGTTATCATGAAATTCTAATTTTGATCTTTGCACATGTTGATGGATATGTGAATAGACTGATTCTA
TGCTCTATGTTATAACTGTGAACGGAGCTTTAGAATTTTGAACTTAGAACATTCTCTTTGGGAGAATGGGAGAATATTTGATGATAAATTTGTGGAACTTTGTGTTTGAA
TACTTGAGATTTGTTTAGATTGAATGTTTATAAGCACTTTTATTAATCAGTTATCAATTAAAT
Protein sequenceShow/hide protein sequence
MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVSKENRAAGVLDNFAEGEKYTEHFLRKFVRNKSPEIMPSINNFFTDPSRN