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PI0021157 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021157
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsequence-specific DNA binding transcription factors;transcription regulators
Genome locationchr05:4741950..4743118
RNA-Seq ExpressionPI0021157
SyntenyPI0021157
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651649.1 hypothetical protein Csa_021260, partial [Cucumis sativus]1.8e-4293.27Show/hide
Query:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHT-SSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
        MRSIHSFRSRRQATTIS LKPSRRRR+KLLHLPKHT SS VSAT  RTTPSAAM+KRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
Subjt:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHT-SSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
KAG6598843.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3681.9Show/hide
Query:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHT--SSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLT
        MRSIHSFR RRQAT+ +NLKP+RRRRLKL+HLPK+T  SS +SA AT TTPS AM+KRLRNLQRLVPGH H+T+LNHLFQRTADYI ALQLKLNILKDLT
Subjt:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHT--SSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLT

Query:  SFYGL
        SFYGL
Subjt:  SFYGL
OMP08066.1 hypothetical protein COLO4_06805 [Corchorus olitorius]2.5e-0434.95Show/hide
Query:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHTSSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSF
        MRS  S R RR+   ++  +  R R++ L +LP + +S   +  T      ++ ++L  LQR++P   +E N++ LFQ TADYI  L+ K+++L++L++F
Subjt:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHTSSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSF

Query:  YGL
        YG+
Subjt:  YGL
TrEMBL top hitse value%identityAlignment
A0A0A0LJ57 Uncharacterized protein8.5e-4393.27Show/hide
Query:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHT-SSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
        MRSIHSFRSRRQATTIS LKPSRRRR+KLLHLPKHT SS VSAT  RTTPSAAM+KRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS
Subjt:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHT-SSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTS

Query:  FYGL
        FYGL
Subjt:  FYGL
A0A1R3KLV4 Uncharacterized protein1.2e-0434.95Show/hide
Query:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHTSSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSF
        MRS  S R RR+   ++  +  R R++ L +LP + +S   +  T      ++ ++L  LQR++P   +E N++ LFQ TADYI  L+ K+++L++L++F
Subjt:  MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHTSSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSF

Query:  YGL
        YG+
Subjt:  YGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators7.7e-0430.67Show/hide
Query:  RRRRLKLLHLPKHTSSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDL
        RR+R +   + K    P  +      P  A+++R++ L+ LVP       L+ LF++TADYI AL++K+ +++ +
Subjt:  RRRRLKLLHLPKHTSSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCTATTCACTCATTCCGATCAAGAAGACAAGCCACCACCATTTCCAATCTCAAACCATCAAGGAGAAGAAGGTTAAAGCTTCTTCACCTCCCAAAACACACCTC
CTCCCCTGTCTCCGCTACCGCCACCCGAACAACTCCGTCCGCTGCCATGAACAAAAGGCTGAGAAATCTTCAGAGGCTGGTCCCTGGCCACACCCATGAAACCAACCTCA
ACCACTTGTTTCAAAGAACTGCTGATTACATCCATGCTTTACAACTTAAGCTCAACATTCTCAAAGATCTCACTTCTTTCTATGGCCTTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTTTCTCCTTTTCTCTCTCTCTTCGTATTAGGAAGCAAAGTATCCCACGCAAAAATGAGGTCTATTCACTCATTCCGATCAAGAAGACAAGCCACCACCATTTCCAA
TCTCAAACCATCAAGGAGAAGAAGGTTAAAGCTTCTTCACCTCCCAAAACACACCTCCTCCCCTGTCTCCGCTACCGCCACCCGAACAACTCCGTCCGCTGCCATGAACA
AAAGGCTGAGAAATCTTCAGAGGCTGGTCCCTGGCCACACCCATGAAACCAACCTCAACCACTTGTTTCAAAGAACTGCTGATTACATCCATGCTTTACAACTTAAGCTC
AACATTCTCAAAGATCTCACTTCTTTCTATGGCCTTTGAATCATATCATTTCCTTATTATTATTATCAGTAGGGTAAATTATAACAAATCATCTTCAACTTTCTTCTTTG
TTTCAAAATTATCTCTATACTTTTAAAAGCTGCAATATTATCCTTAAACTATCATAAACAATTACAAAACTATTTTCGTGAGTAAATCTTTTTAGAAATTTCCAACAGAG
AACTCAATGCATACTTAGAAAACTACGTGTGGCAATGACTTAAAACGATGTGGTGATTCATATTTTTATTCTTTATGTTATTTGCTACCCAATTTCAATATCTCAATTTC
TCTCTAAATTCTTAATGATCTCTATTTCAAGAGTATTTCTGGAACGTTTATGAAAATTTAAGGATAATATTGCAAAATTTGAAAATATGGTGATATTCTTTTTAAACAAA
TGAAAAGGTTTAAGGGTATTTTTATAATTTAACCTTATAATTATTCTAAAATTAGGTTGCCTTATGCTTTATTATATTAATTTAAATTTGTATTCTATGCAAGCTCTCTC
TTTCTTTATATTTTATATGTCTTTAATTTTTAGCTCTCCCCTCTTTCTTAGCCTTAGAGAAATTGTGTAGTTAAGTTTCTAATCATTGAGAGCCTACAATGGCCTAAAAT
GTTCTTTGGGGGAAAACAAAAGGAATCAAAAAGTCTTATATTTATGCAATTATTTATTATTATTCCATATGTAATTTAGTACCTTTTATTTTTACCTTTTCTTCATTTTC
TCCTTGCTAATTATTGTTGAATGGAAAATATAAGATATATTATCCTTGCATAAGATTTTTATTTTTCAA
Protein sequenceShow/hide protein sequence
MRSIHSFRSRRQATTISNLKPSRRRRLKLLHLPKHTSSPVSATATRTTPSAAMNKRLRNLQRLVPGHTHETNLNHLFQRTADYIHALQLKLNILKDLTSFYGL