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PI0021170 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021170
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:12657053..12657262
RNA-Seq ExpressionPI0021170
SyntenyPI0021170
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.7e-1776.12Show/hide
Query:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLS
        MDTD A  NI NIC MKHLQ YQI KSTNKN +TKR+  NIE RVD +NQLEIDDV+VVEHIDFLLS
Subjt:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLS

KAA0040939.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]9.8e-0575Show/hide
Query:  YQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQ
        YQI KSTNKN +TKR+  NIEF+VD DNQLEIDD+Q
Subjt:  YQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQ

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-1676.56Show/hide
Query:  ATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLSFK
        A  NITNIC MKHLQ YQI KSTNKN +TKR+  NIEFRV+ DNQL+ID+VQVVEHIDFLLS K
Subjt:  ATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLSFK

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.7e-1376.79Show/hide
Query:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDV
        MD D A  NITNIC MKHLQ YQI KSTNKN +TKR+  NIEFRVD DNQLEIDDV
Subjt:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDV

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.2e-0465.85Show/hide
Query:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNI
        MD D    NITNIC MKHLQ YQI KSTNKN +TKR+  +I
Subjt:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNI

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein7.0e-1776.56Show/hide
Query:  ATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLSFK
        A  NITNIC MKHLQ YQI KSTNKN +TKR+  NIEFRV+ DNQL+ID+VQVVEHIDFLLS K
Subjt:  ATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLSFK

A0A5A7TI03 Stress-response A/B barrel domain-containing protein4.7e-0575Show/hide
Query:  YQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQ
        YQI KSTNKN +TKR+  NIEF+VD DNQLEIDD+Q
Subjt:  YQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQ

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.8e-1376.79Show/hide
Query:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDV
        MD D A  NITNIC MKHLQ YQI KSTNKN +TKR+  NIEFRVD DNQLEIDDV
Subjt:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.3e-1876.12Show/hide
Query:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLS
        MDTD A  NI NIC MKHLQ YQI KSTNKN +TKR+  NIE RVD +NQLEIDDV+VVEHIDFLLS
Subjt:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLS

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X21.1e-0465.85Show/hide
Query:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNI
        MD D    NITNIC MKHLQ YQI KSTNKN +TKR+  +I
Subjt:  MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGGACGCAGCCACAGAGAACATAACGAATATATGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCAACAAGAACTATAAAACCAAGAGGAG
CCATGGCAACATAGAGTTTAGAGTCGACGATGACAACCAACTCGAAATCGACGATGTGCAGGTTGTAGAACACATTGATTTTCTTTTATCTTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGGACGCAGCCACAGAGAACATAACGAATATATGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCAACAAGAACTATAAAACCAAGAGGAG
CCATGGCAACATAGAGTTTAGAGTCGACGATGACAACCAACTCGAAATCGACGATGTGCAGGTTGTAGAACACATTGATTTTCTTTTATCTTTTAAATGA
Protein sequenceShow/hide protein sequence
MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLSFK