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PI0021179 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021179
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:16833066..16833230
RNA-Seq ExpressionPI0021179
SyntenyPI0021179
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053146.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.9e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ DD+DE DST+ATT G+DI+YIET+N W+QWKDELA +MF+DWEL NQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.9e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ D++DE DST+ATT  +DIHYIETSN WSQW+D+LA +MF DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ D++DE DST+ATT  +DIHYIETSN WSQW+D+LA +MF+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.0e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ D++DE DST+ATT  +DIHYIETSN WSQW+D+LA +MF+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

XP_031740445.1 uncharacterized protein LOC116403439 [Cucumis sativus]1.2e-1366.67Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN    DDVDEGDSTYAT GG+DI ++E SN W+QW+D+LAG+MFN+W+LRN+
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7UFY9 Putative nuclease HARBI13.3e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ DD+DE DST+ATT G+DI+YIET+N W+QWKDELA +MF+DWEL NQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

A0A5A7UIM7 Putative nuclease HARBI13.3e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ D++DE DST+ATT  +DIHYIETSN WSQW+D+LA +MF DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

A0A5A7VJX3 Retrotransposon protein4.4e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ D++DE DST+ATT  +DIHYIETSN WSQW+D+LA +MF+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

A0A5D3BCB2 Retrotransposon protein7.4e-1467.92Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRN
        MTN D+PDD+DE  S++ATT G+DIHY+ETSN WS+W+DEL  +MF+DWELRN
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRN

A0A5D3BL48 Putative nuclease HARBI14.4e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ
        MTN D+ D++DE DST+ATT  +DIHYIETSN WSQW+D+LA +MF+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGATGTACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAATGCATGGAGTCAATG
GAAGGACGAGCTTGCCGGAAAAATGTTCAATGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGATGTACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAATGCATGGAGTCAATG
GAAGGACGAGCTTGCCGGAAAAATGTTCAATGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDVPDDVDEGDSTYATTGGEDIHYIETSNAWSQWKDELAGKMFNDWELRNQ