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PI0021182 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021182
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGibberellin regulated protein
Genome locationchr01:861331..862557
RNA-Seq ExpressionPI0021182
SyntenyPI0021182
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8008067.1 hypothetical protein FH972_004614 [Carpinus fangiana]5.5e-1656.98Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        +LL   L  C LLLS+SF++  MA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G+YG KH CPCY      +G+AKC
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

KAG6588701.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2784.85Show/hide
Query:  MDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKC
        M+TAMA +DVCTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG+YGK HCPCYSHVHT+RGRAKC
Subjt:  MDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKC

KAG7022485.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3581.61Show/hide
Query:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKC
        MR Q+L++G F CFLLLSASFM+TAMA +DVCTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG+YGK HCPCYSHVHT+RGRAKC
Subjt:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKC

XP_016499410.1 PREDICTED: peamaclein-like [Nicotiana tabacum]9.4e-1657.33Show/hide
Query:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        LLL++SF++TA A S  C R C+ RCSKA +K RC+KYC +CC+KCKCVP G+YG KH CPCY  +   +G+ KC
Subjt:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

XP_021683427.1 snakin-1-like [Hevea brasiliensis]1.2e-1553.49Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        +L    L  C LLLS+SF++ AMA S  CT+ C+ RC+KA +K RC+KYC ICC++CKCVP G+YG KH CPCY      +G+ KC
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

TrEMBL top hitse value%identityAlignment
A0A0A0K2Z1 Uncharacterized protein7.0e-4195.4Show/hide
Query:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKC
        MRT LLLLGLFFCFLLLSASFMDTAMADSD CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPG YGK HCPCYSHVHTIRGRAKC
Subjt:  MRTQLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKC

A0A1S4CE27 peamaclein-like4.5e-1657.33Show/hide
Query:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        LLL++SF++TA A S  C R C+ RCSKA +K RC+KYC +CC+KCKCVP G+YG KH CPCY  +   +G+ KC
Subjt:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

A0A2I0KSA4 peamaclein-like1.0e-1552.38Show/hide
Query:  LLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        LL  +  C  LLS++FM+  MA S  CT+ C +RC KA +K RC+KYC ICC++CKCVP G+YG KH CPCY      +G+ KC
Subjt:  LLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

A0A5D3E0A6 Peamaclein-like1.3e-1552.33Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        +L       CFLL ++SF+DT  A    C + C+KRCS+A +K RCMKYC ICC  CKCVP G+YG KH CPCY  + + +GR KC
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

A0A5N6QLL9 Uncharacterized protein2.7e-1656.98Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        +LL   L  C LLLS+SF++  MA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G+YG KH CPCY      +G+AKC
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

SwissProt top hitse value%identityAlignment
C0HLQ1 Cypmaclein1.6e-1051.72Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKC
        C + C +RCSKA    RC+KYC ICC KC CV PG+YG +  CPCY+++   +G  KC
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKC

O80641 Gibberellin-regulated protein 81.9e-1145.35Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        +L+++  F   LLL++SF   + ADS  C   C  RCSKA     C+KYC ICC KC CVP G++G K  CPCY  +   +G +KC
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

P86888 Peamaclein1.6e-1052.46Show/hide
Query:  SDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        S  C   C  RCSKA  + RC+KYC ICC KC CVP G+YG K  CPCY  +   +G  KC
Subjt:  SDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

Q8LFM2 Gibberellin-regulated protein 101.5e-1148.68Show/hide
Query:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKC
        LL+++S    + ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G+YG K  CPCY  +   +G +KC
Subjt:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKC

Q948Z4 Snakin-11.3e-1550Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        +L LL L    L+++ S + T MA S  C   C+ RCSKA L  RC+KYC ICC +CKCVP G+YG KH CPCY      +G++KC
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein9.1e-0938.95Show/hide
Query:  TQLLLLGLFFCFLLLSAS--------FMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKC
        T  LLL + F F+ L+ S                S  C   C +RCS  K  + CM +C+ CC+KC CV PG+YG K  CPCY++  T +G  KC
Subjt:  TQLLLLGLFFCFLLLSAS--------FMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTIRGRAKC

AT2G14900.1 Gibberellin-regulated family protein2.8e-1050Show/hide
Query:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        C + C  RC +A +K RC+KYC ICC  C+CVP G+YG KH C CY    + +G  KC
Subjt:  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

AT2G39540.1 Gibberellin-regulated family protein1.4e-1245.35Show/hide
Query:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC
        +L+++  F   LLL++SF   + ADS  C   C  RCSKA     C+KYC ICC KC CVP G++G K  CPCY  +   +G +KC
Subjt:  QLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTIRGRAKC

AT4G09600.1 GAST1 protein homolog 33.1e-0939.36Show/hide
Query:  RTQLLLLGLFFC---FLLLSASFMDTAMADSDV---CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYGKHH-CPCYSHVHTIRGRAKC
        R+ L+LL + FC   F L   +  D+ + +  V   C   C+ RCSK+     C++ C  CC +C CV PG+ G HH CPCY+ + T  GR KC
Subjt:  RTQLLLLGLFFC---FLLLSASFMDTAMADSDV---CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYGKHH-CPCYSHVHTIRGRAKC

AT5G59845.1 Gibberellin-regulated family protein1.0e-1248.68Show/hide
Query:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKC
        LL+++S    + ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G+YG K  CPCY  +   +G +KC
Subjt:  LLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHHCPCYSHVHTIRGRAKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTCAGCTTTTGCTTCTTGGCTTGTTCTTCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGACGTGTGCACAAGACCGTGCAG
GAAGAGGTGCTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTACTGTAGAATATGTTGCAGTAAATGTAAATGTGTGCCAGGGAGTTATGGGAAGCACCATTGCCCTT
GCTATAGCCATGTTCACACCATTAGAGGCAGGGCCAAATGCCTTAATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACATCTTTCACAGTTATATAAAAAAAGATTAATTTTTTTAGATCAAATTGTAATTAAACCTTGAGAGAAACACACTCACTCTGTTTCGTGTTTTAAAAAGCACTT
ACTCTGCAAACGCCTTCTTCTCTGTGAGAGAAACAAATCTGAGATTTCATTTCTCTCATCTGAAAGGATCAAAACAATGAGAACTCAGCTTTTGCTTCTTGGCTTGTTCT
TCTGTTTCCTTCTCTTAAGTGCTTCTTTCATGGACACTGCCATGGCTGATTCAGACGTGTGCACAAGACCGTGCAGGAAGAGGTGCTCGAAAGCGAAGCTGAAGCGTCGG
TGCATGAAGTACTGTAGAATATGTTGCAGTAAATGTAAATGTGTGCCAGGGAGTTATGGGAAGCACCATTGCCCTTGCTATAGCCATGTTCACACCATTAGAGGCAGGGC
CAAATGCCTTAATTTTTAAGACCATTTGCATTTATTGTCCCTTATTATGAAATCAAATAAGCCAACCTAAATAGTACTATAGAAATGAGACCAAAATAATTTGTGTCTGA
TTTAAATATTAAATGCTTTAAAGTTTGAATGTGAGGTTTGGTGTGCTTTTTTTTTTTTTTTTTTAATAATAATAAAACAATGTGTACTTATGACCTACCTTAGTTATTAT
ATTT
Protein sequenceShow/hide protein sequence
MRTQLLLLGLFFCFLLLSASFMDTAMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTIRGRAKCLNF