; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021202 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021202
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationchr06:27961240..27962540
RNA-Seq ExpressionPI0021202
SyntenyPI0021202
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147963.1 histone deacetylase complex subunit SAP18 [Cucumis sativus]1.0e-8497.59Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAATAP QGRPSGRPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVFTK GGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_008448944.1 PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo]3.0e-8497.59Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA AP QGRPSGRPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVFTK GGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_022152730.1 histone deacetylase complex subunit SAP18-like [Momordica charantia]3.0e-8496.99Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAPPQGRPS RPLPPPSQ KAPPPPPRPRFEPVDREKTCPLLLRVFTK GGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_022946300.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]9.0e-8193.98Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAPPQGRPS RPLPPPSQ KAPPPPPR RFEPVDREKTCPLLLRVFTK G HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_038905116.1 histone deacetylase complex subunit SAP18-like [Benincasa hispida]1.1e-8195.78Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAP QGRPSGRPLPPP   KAPPPPPRPRFEPVDREKTCPLLLRVFTK GGHHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

TrEMBL top hitse value%identityAlignment
A0A0A0L751 Uncharacterized protein5.0e-8597.59Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAATAP QGRPSGRPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVFTK GGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A1S3BLT9 histone deacetylase complex subunit SAP18-like1.4e-8497.59Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA AP QGRPSGRPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVFTK GGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A5D3D7E1 Histone deacetylase complex subunit SAP18-like1.4e-8497.59Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA AP QGRPSGRPLPPPSQTKAPPP PRPRFEPVDREKTCPLLLRVFTK GGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1DES5 histone deacetylase complex subunit SAP18-like1.4e-8496.99Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAPPQGRPS RPLPPPSQ KAPPPPPRPRFEPVDREKTCPLLLRVFTK GGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1KTJ0 histone deacetylase complex subunit SAP18-like4.4e-8193.98Show/hide
Query:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAPPQGRPS RPLPPPSQ KAPPPPPR RFEPVDREKTCPLLLRVFTK G HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP186.4e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

O55128 Histone deacetylase complex subunit SAP188.3e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

O64644 Histone deacetylase complex subunit SAP184.5e-5169.28Show/hide
Query:  AATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG   GRPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK+GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI

Q3T022 Histone deacetylase complex subunit SAP186.4e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

Q5RDT5 Histone deacetylase complex subunit SAP186.4e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P183.2e-5269.28Show/hide
Query:  AATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG   GRPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK+GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI

AT2G45640.2 SIN3 associated polypeptide P183.0e-5069.28Show/hide
Query:  AATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG   GRPLPPP +      PPRP+ EPVDREKTCPLLLRVFTK+GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G +    VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAGAAGCAGAGATGAGAAGACGAGCGGAGCTGCAACTGCTCCGCCGCAAGGGAGACCGTCGGGGCGGCCACTCCCTCCGCCGTCTCAAACCAAAGCTCCGCC
GCCTCCTCCTCGTCCTCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTTACTAAGGCTGGAGGTCATCATACTGATGAGGATTTTGCAA
TTAGAGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGA
AATGCCAAGCTTTCTTTTGCTTTTGTTTATCCCGACAAGCGTGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGATTAGACGATAG
CAAGGCATTGGGCGAATTGGACTTCCAGATTGGAGACTATTTGGACGTTGCAATCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGAGAAGCAGAGATGAGAAGACGAGCGGAGCTGCAACTGCTCCGCCGCAAGGGAGACCGTCGGGGCGGCCACTCCCTCCGCCGTCTCAAACCAAAGCTCCGCC
GCCTCCTCCTCGTCCTCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTTACTAAGGCTGGAGGTCATCATACTGATGAGGATTTTGCAA
TTAGAGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCAAGAAGAAGA
AATGCCAAGCTTTCTTTTGCTTTTGTTTATCCCGACAAGCGTGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGATTAGACGATAG
CAAGGCATTGGGCGAATTGGACTTCCAGATTGGAGACTATTTGGACGTTGCAATCCTGTAG
Protein sequenceShow/hide protein sequence
MDKRSRDEKTSGAATAPPQGRPSGRPLPPPSQTKAPPPPPRPRFEPVDREKTCPLLLRVFTKAGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRR
NAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL