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PI0021208 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021208
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:20151529..20152047
RNA-Seq ExpressionPI0021208
SyntenyPI0021208
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]7.9e-7284.15Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        MTENSQ+FGNRA +LDN LTKEVSELKSQMLNMTTLLTSFVQG PLKVTKCGVC LVGHPNDKCPE+I+DVN++RKYD YGN YNSGW+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA  +SSNQG NLED++K LATNTLSFQQEMKQQMT LTTAISK+DGKGKL AQPD+ANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.6e-7284.76Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M ENSQSF NRAS+LDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKVTKCGVCGLVGHPNDKCPE+I+DVN++RKYD +GN YNSGW+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA S+SSNQG NLED++K LATNTLSFQQEMKQQMT LTTAISK+DGKGKLSAQ ++ANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
KAA0053321.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.3e-7082.93Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M  NSQSFGNR S+LDNSLTKEVSEL SQMLNMTTLLTSFVQ  PLKVTKCGVCGLVGHPNDKCPE+I+DVN++R+YD YGN YNSGW+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA  +SSNQG NLED++K LATNTLSFQQEMKQQMT LTTAISK+DGKGKL AQ DHANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.7e-7180Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M ENSQSFGNRA +LDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKVTKCGVCGLVGHPNDKCPE+I+DVN++R+YD +GN YNS W+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANVECHLTK
        QK TQA S+SSNQG NL+D++K L TNTLSFQQEMKQQMT LTTAISK+DGKGKL AQP+H NV   L +
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANVECHLTK
TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.3e-7082.32Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M ENS+SFGNRAS+LDNSLTKEVSELKSQMLNMTTLLTSFVQG P KVTKCGVCGLVGHPNDKCP++I+DVN++R+YD + N YNSGW+DN NL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA S+SSNQG NLED++K LATNTLSFQQ+MKQQMT LTTAISK+DGKGKL AQPDHANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
TrEMBL top hitse value%identityAlignment
A0A5A7UID2 Retrotransposon gag protein1.6e-7082.93Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M  NSQSFGNR S+LDNSLTKEVSEL SQMLNMTTLLTSFVQ  PLKVTKCGVCGLVGHPNDKCPE+I+DVN++R+YD YGN YNSGW+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA  +SSNQG NLED++K LATNTLSFQQEMKQQMT LTTAISK+DGKGKL AQ DHANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
A0A5A7V1C6 Retrotransposon gag protein3.2e-7180Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M ENSQSFGNRA +LDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKVTKCGVCGLVGHPNDKCPE+I+DVN++R+YD +GN YNS W+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANVECHLTK
        QK TQA S+SSNQG NL+D++K L TNTLSFQQEMKQQMT LTTAISK+DGKGKL AQP+H NV   L +
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANVECHLTK
A0A5D3CB46 Retrotransposon gag protein1.6e-7082.32Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M ENS+SFGNRAS+LDNSLTKEVSELKSQMLNMTTLLTSFVQG P KVTKCGVCGLVGHPNDKCP++I+DVN++R+YD + N YNSGW+DN NL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA S+SSNQG NLED++K LATNTLSFQQ+MKQQMT LTTAISK+DGKGKL AQPDHANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
A0A5D3CRR8 Retrotransposon gag protein2.2e-7284.76Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        M ENSQSF NRAS+LDNSLTKEVSELKSQMLNMTTLLTSFVQG PLKVTKCGVCGLVGHPNDKCPE+I+DVN++RKYD +GN YNSGW+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA S+SSNQG NLED++K LATNTLSFQQEMKQQMT LTTAISK+DGKGKLSAQ ++ANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
E5GBZ4 Retrotransposon gag protein3.8e-7284.15Show/hide
Query:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN
        MTENSQ+FGNRA +LDN LTKEVSELKSQMLNMTTLLTSFVQG PLKVTKCGVC LVGHPNDKCPE+I+DVN++RKYD YGN YNSGW+DNPNL+WGNDN
Subjt:  MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDN

Query:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
        QK TQA  +SSNQG NLED++K LATNTLSFQQEMKQQMT LTTAISK+DGKGKL AQPD+ANV
Subjt:  QKPTQATSSSSNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAGAATTCTCAAAGCTTTGGGAATAGGGCATCGAAACTTGACAACTCTCTAACCAAAGAGGTAAGTGAATTAAAATCTCAAATGTTAAATATGACAACTCTTCT
TACTTCTTTTGTGCAAGGTGGTCCTCTCAAAGTAACAAAATGTGGAGTTTGTGGCTTGGTTGGACATCCAAATGACAAATGTCCCGAGTTGATCAAGGATGTGAATGTTA
TTCGAAAATATGACCGGTACGGTAATATTTACAATTCGGGATGGAAAGACAACCCGAACTTGAAATGGGGGAATGACAACCAAAAGCCCACACAAGCAACATCCTCCTCT
TCAAACCAAGGTATGAATCTTGAAGACGTTGTCAAAACTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATGACTCACCTTACTACCGCCATAAG
CAAGTTGGATGGGAAAGGCAAGCTTTCGGCCCAACCGGACCATGCCAACGTTGAGTGCCATCTCACTAAGGAGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGAGAATTCTCAAAGCTTTGGGAATAGGGCATCGAAACTTGACAACTCTCTAACCAAAGAGGTAAGTGAATTAAAATCTCAAATGTTAAATATGACAACTCTTCT
TACTTCTTTTGTGCAAGGTGGTCCTCTCAAAGTAACAAAATGTGGAGTTTGTGGCTTGGTTGGACATCCAAATGACAAATGTCCCGAGTTGATCAAGGATGTGAATGTTA
TTCGAAAATATGACCGGTACGGTAATATTTACAATTCGGGATGGAAAGACAACCCGAACTTGAAATGGGGGAATGACAACCAAAAGCCCACACAAGCAACATCCTCCTCT
TCAAACCAAGGTATGAATCTTGAAGACGTTGTCAAAACTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACAAATGACTCACCTTACTACCGCCATAAG
CAAGTTGGATGGGAAAGGCAAGCTTTCGGCCCAACCGGACCATGCCAACGTTGAGTGCCATCTCACTAAGGAGTGGTAA
Protein sequenceShow/hide protein sequence
MTENSQSFGNRASKLDNSLTKEVSELKSQMLNMTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPELIKDVNVIRKYDRYGNIYNSGWKDNPNLKWGNDNQKPTQATSSS
SNQGMNLEDVVKTLATNTLSFQQEMKQQMTHLTTAISKLDGKGKLSAQPDHANVECHLTKEW