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PI0021210 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021210
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr09:7940073..7940237
RNA-Seq ExpressionPI0021210
SyntenyPI0021210
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053146.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.9e-1472.22Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI DD+DE DST+ATT G++I+YIET++ W+QWKDELAE MFSDWEL NQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-1370.37Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI D++DE DST+ATT  ++IHYIETS+ WSQW+D+LAE MF+DWELRNQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.6e-1370.37Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI DD+DE DST+ATT  ++IHYIETS+ WS+W+D+LAE MFSDWEL NQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI D++DE DST+ATT  ++IHYIETS+ WSQW+D+LAE MFSDWELRNQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI D++DE DST+ATT  ++IHYIETS+ WSQW+D+LAE MFSDWELRNQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7UFY9 Putative nuclease HARBI13.3e-1472.22Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI DD+DE DST+ATT G++I+YIET++ W+QWKDELAE MFSDWEL NQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

A0A5A7UIM7 Putative nuclease HARBI17.4e-1470.37Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI D++DE DST+ATT  ++IHYIETS+ WSQW+D+LAE MF+DWELRNQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

A0A5A7VJX3 Retrotransposon protein5.7e-1472.22Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI D++DE DST+ATT  ++IHYIETS+ WSQW+D+LAE MFSDWELRNQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

A0A5A7VLF4 Putative nuclease HARBI11.3e-1370.37Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI DD+DE DST+ATT  ++IHYIETS+ WS+W+D+LAE MFSDWEL NQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

A0A5D3BL48 Putative nuclease HARBI15.7e-1472.22Show/hide
Query:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ
        MTN DI D++DE DST+ATT  ++IHYIETS+ WSQW+D+LAE MFSDWELRNQ
Subjt:  MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACACTGACATACCGGATGACGTTGATGAGGGTGACTCTACATACGCCACCACTGGCGGTGAAGAAATTCACTACATAGAGACATCGAGTGCATGGAGTCAATG
GAAGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTACGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACACTGACATACCGGATGACGTTGATGAGGGTGACTCTACATACGCCACCACTGGCGGTGAAGAAATTCACTACATAGAGACATCGAGTGCATGGAGTCAATG
GAAGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGGAGTTACGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNTDIPDDVDEGDSTYATTGGEEIHYIETSSAWSQWKDELAERMFSDWELRNQ