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PI0021218 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021218
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr03:14385728..14386398
RNA-Seq ExpressionPI0021218
SyntenyPI0021218
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046870.1 uncharacterized protein E6C27_scaffold230G00250 [Cucumis melo var. makuwa]2.8e-2249.29Show/hide
Query:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF
        I +  +S+  +F  +I+    RF SSLL+H N  ILS ++ALG  PKTL LSYRLFQGS+ PD+EH  RP +   ++D   +  S++G  +P  LAS+I 
Subjt:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF

Query:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA
        + L+  S+AL++SI++L+ RRLEVD+L+RHLK L+PSSSA
Subjt:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA

KAA0053603.1 uncharacterized protein E6C27_scaffold190G001780 [Cucumis melo var. makuwa]6.6e-2455.83Show/hide
Query:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR
        RF SSLL+H N  IL+ +DA G   KTLSLSYRLFQGSH P+IEH  RP +  H  D+  V  +++G  +   LASRI ++ +AESQAL++SI++L+ RR
Subjt:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR

Query:  LEVDALLRHLKALLPSSSAS
        LEVD+L+RHLK L+PSSS +
Subjt:  LEVDALLRHLKALLPSSSAS

KAA0063935.1 uncharacterized protein E6C27_scaffold616G00780 [Cucumis melo var. makuwa]1.3e-2255.17Show/hide
Query:  FLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQE--LHDSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRRL
        F  SLL++ N  IL+ +DA GL PKT SLSYRLFQGSH PD+EH  RP +   L D   +  S +G  +P+ LASRI + LSAES+A ++SI++++ RRL
Subjt:  FLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQE--LHDSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRRL

Query:  EVDALLRHLKALLPSS
        EVD+L+RHLK L+PSS
Subjt:  EVDALLRHLKALLPSS

TYK19190.1 uncharacterized protein E5676_scaffold522G001260 [Cucumis melo var. makuwa]3.9e-2456.67Show/hide
Query:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR
        RF SSLL+H N  IL+ +DA G   KTLSLSYRLFQGSH P+IEH  RP +  H  D+  V  +++G  +   LASRI ++L AESQAL++SI++L+ RR
Subjt:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR

Query:  LEVDALLRHLKALLPSSSAS
        LEVD+L+RHLK L+PSSS +
Subjt:  LEVDALLRHLKALLPSSSAS

XP_008452365.1 PREDICTED: uncharacterized protein LOC103493426 [Cucumis melo]2.8e-2249.29Show/hide
Query:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF
        I +  +S+  +F  +I+    RF SSLL+H N  ILS ++ALG  PKTL LSYRLFQGS+ PD+EH  RP +   ++D   +  S++G  +P  LAS+I 
Subjt:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF

Query:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA
        + L+  S+AL++SI++L+ RRLEVD+L+RHLK L+PSSSA
Subjt:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA

TrEMBL top hitse value%identityAlignment
A0A5A7TUQ0 Uncharacterized protein1.3e-2249.29Show/hide
Query:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF
        I +  +S+  +F  +I+    RF SSLL+H N  ILS ++ALG  PKTL LSYRLFQGS+ PD+EH  RP +   ++D   +  S++G  +P  LAS+I 
Subjt:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF

Query:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA
        + L+  S+AL++SI++L+ RRLEVD+L+RHLK L+PSSSA
Subjt:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA

A0A5A7UCJ0 Uncharacterized protein3.2e-2455.83Show/hide
Query:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR
        RF SSLL+H N  IL+ +DA G   KTLSLSYRLFQGSH P+IEH  RP +  H  D+  V  +++G  +   LASRI ++ +AESQAL++SI++L+ RR
Subjt:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR

Query:  LEVDALLRHLKALLPSSSAS
        LEVD+L+RHLK L+PSSS +
Subjt:  LEVDALLRHLKALLPSSSAS

A0A5A7VDH4 Uncharacterized protein6.1e-2355.17Show/hide
Query:  FLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQE--LHDSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRRL
        F  SLL++ N  IL+ +DA GL PKT SLSYRLFQGSH PD+EH  RP +   L D   +  S +G  +P+ LASRI + LSAES+A ++SI++++ RRL
Subjt:  FLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQE--LHDSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRRL

Query:  EVDALLRHLKALLPSS
        EVD+L+RHLK L+PSS
Subjt:  EVDALLRHLKALLPSS

A0A5D3BYL4 Uncharacterized protein1.3e-2249.29Show/hide
Query:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF
        I +  +S+  +F  +I+    RF SSLL+H N  ILS ++ALG  PKTL LSYRLFQGS+ PD+EH  RP +   ++D   +  S++G  +P  LAS+I 
Subjt:  ILSYSISYSRSFSFRINW---RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQ--ELHDSRTVPISSDGLLIPQSLASRIF

Query:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA
        + L+  S+AL++SI++L+ RRLEVD+L+RHLK L+PSSSA
Subjt:  SLLSAESQALNSSISVLTKRRLEVDALLRHLKALLPSSSA

A0A5D3D6T2 Uncharacterized protein1.9e-2456.67Show/hide
Query:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR
        RF SSLL+H N  IL+ +DA G   KTLSLSYRLFQGSH P+IEH  RP +  H  D+  V  +++G  +   LASRI ++L AESQAL++SI++L+ RR
Subjt:  RFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELH--DSRTVPISSDGLLIPQSLASRIFSLLSAESQALNSSISVLTKRR

Query:  LEVDALLRHLKALLPSSSAS
        LEVD+L+RHLK L+PSSS +
Subjt:  LEVDALLRHLKALLPSSSAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTGCAACATCCTCTCCTACTCCATCTCCTACTCAAGAAGTTTTAGCTTCAGAATTAACTGGAGATTCCTTTCCAGCTTGCTTCTCCATCAAAATCGAGGGATTCT
ATCTGATCATGATGCTCTAGGGCTTGCTCCTAAAACTCTATCTCTTAGTTACAGACTATTTCAAGGCTCTCATGCACCAGATATTGAGCACTCTGCTCGGCCTCCACAAG
AACTTCATGATTCAAGAACTGTCCCCATATCATCTGATGGCCTGCTTATACCACAATCCTTAGCATCCCGGATATTCAGTCTTTTGTCTGCTGAATCCCAAGCTCTGAAC
AGTTCCATTTCTGTCTTAACTAAAAGAAGATTAGAAGTGGATGCTCTTCTTCGACACTTGAAGGCTCTTCTCCCGTCTTCGAGTGCCTCTGCTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTGCAACATCCTCTCCTACTCCATCTCCTACTCAAGAAGTTTTAGCTTCAGAATTAACTGGAGATTCCTTTCCAGCTTGCTTCTCCATCAAAATCGAGGGATTCT
ATCTGATCATGATGCTCTAGGGCTTGCTCCTAAAACTCTATCTCTTAGTTACAGACTATTTCAAGGCTCTCATGCACCAGATATTGAGCACTCTGCTCGGCCTCCACAAG
AACTTCATGATTCAAGAACTGTCCCCATATCATCTGATGGCCTGCTTATACCACAATCCTTAGCATCCCGGATATTCAGTCTTTTGTCTGCTGAATCCCAAGCTCTGAAC
AGTTCCATTTCTGTCTTAACTAAAAGAAGATTAGAAGTGGATGCTCTTCTTCGACACTTGAAGGCTCTTCTCCCGTCTTCGAGTGCCTCTGCTGAATGA
Protein sequenceShow/hide protein sequence
MICNILSYSISYSRSFSFRINWRFLSSLLLHQNRGILSDHDALGLAPKTLSLSYRLFQGSHAPDIEHSARPPQELHDSRTVPISSDGLLIPQSLASRIFSLLSAESQALN
SSISVLTKRRLEVDALLRHLKALLPSSSASAE