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PI0021230 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021230
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionHistidine--tRNA ligase
Genome locationchr07:575156..575682
RNA-Seq ExpressionPI0021230
SyntenyPI0021230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR57518.1 hypothetical protein CICLE_v10023157mg [Citrus clementina]8.8e-0546.75Show/hide
Query:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVA-----------LTKNHGVGTRR--NQKEDPIRTIMFLGSWSHT
        MK   V  E S   DS RT+GEK  QAY+   VA           +  N G+  R+   + EDPIRTIMFLGSWSHT
Subjt:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVA-----------LTKNHGVGTRR--NQKEDPIRTIMFLGSWSHT

KAA0044357.1 hypothetical protein E6C27_scaffold46G00840 [Cucumis melo var. makuwa]9.3e-1581.54Show/hide
Query:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKV--ALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT
        MKVQH   EKSSD SSRT+GEKLAQAY+DVKV  ALTKN GVG RRNQKEDPIRTIMFLG WS T
Subjt:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKV--ALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT

KAE8009525.1 hypothetical protein FH972_005957 [Carpinus fangiana]8.8e-0545.45Show/hide
Query:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVALTKNH-----------GVGTRR--NQKEDPIRTIMFLGSWSHT
        MK QH   + S   DS RTVGEKL +AY+  ++A+  N             +  RR     EDPIRT+MFLGSWSHT
Subjt:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVALTKNH-----------GVGTRR--NQKEDPIRTIMFLGSWSHT

KGN52786.1 hypothetical protein Csa_015138 [Cucumis sativus]9.6e-2088.89Show/hide
Query:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKVALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT
        MKVQH   EKSSD SSRTVGEKLAQAY+DVKVALTKN GVGTRRNQ+EDPIRTIMFLGSWSHT
Subjt:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKVALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT

TKY61797.1 hypothetical protein E2542_SST11650 [Spatholobus suberectus]5.1e-0549.28Show/hide
Query:  HVCSEKS--SDSSRTVGEKLAQAYQDVKVALTKNHGVGTRR---------NQKEDPIRTIMFLGSWSHT
        HV  E S  ++SSR+VGEKL Q  +   VA+T +     RR         +Q EDPIRT+MFLGSWSHT
Subjt:  HVCSEKS--SDSSRTVGEKLAQAYQDVKVALTKNHGVGTRR---------NQKEDPIRTIMFLGSWSHT

TrEMBL top hitse value%identityAlignment
A0A067H5M1 Uncharacterized protein4.2e-0546.75Show/hide
Query:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVA-----------LTKNHGVGTRR--NQKEDPIRTIMFLGSWSHT
        MK   V  E S   DS RT+GEK  QAY+   VA           +  N G+  R+   + EDPIRTIMFLGSWSHT
Subjt:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVA-----------LTKNHGVGTRR--NQKEDPIRTIMFLGSWSHT

A0A0A0KY58 Uncharacterized protein4.7e-2088.89Show/hide
Query:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKVALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT
        MKVQH   EKSSD SSRTVGEKLAQAY+DVKVALTKN GVGTRRNQ+EDPIRTIMFLGSWSHT
Subjt:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKVALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT

A0A5A7TR66 Uncharacterized protein4.5e-1581.54Show/hide
Query:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKV--ALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT
        MKVQH   EKSSD SSRT+GEKLAQAY+DVKV  ALTKN GVG RRNQKEDPIRTIMFLG WS T
Subjt:  MKVQHVCSEKSSD-SSRTVGEKLAQAYQDVKV--ALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT

A0A5N6QQU4 Uncharacterized protein4.2e-0545.45Show/hide
Query:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVALTKNH-----------GVGTRR--NQKEDPIRTIMFLGSWSHT
        MK QH   + S   DS RTVGEKL +AY+  ++A+  N             +  RR     EDPIRT+MFLGSWSHT
Subjt:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVALTKNH-----------GVGTRR--NQKEDPIRTIMFLGSWSHT

V4TB14 Uncharacterized protein4.2e-0546.75Show/hide
Query:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVA-----------LTKNHGVGTRR--NQKEDPIRTIMFLGSWSHT
        MK   V  E S   DS RT+GEK  QAY+   VA           +  N G+  R+   + EDPIRTIMFLGSWSHT
Subjt:  MKVQHVCSEKS--SDSSRTVGEKLAQAYQDVKVA-----------LTKNHGVGTRR--NQKEDPIRTIMFLGSWSHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTCAACATGTTTGTAGTGAAAAAAGTAGTGATTCAAGTAGAACAGTTGGAGAGAAACTTGCTCAAGCTTACCAGGATGTGAAGGTTGCCCTAACGAAAAATCA
TGGCGTTGGAACGAGACGAAACCAAAAGGAAGATCCTATTAGAACCATAATGTTCTTGGGTTCATGGAGTCACACTTGA
mRNA sequenceShow/hide mRNA sequence
CTTCTTTTTGCATACATACATAGAGAATATGAAGGTTCAACATGTTTGTAGTGAAAAAAGTAGTGATTCAAGTAGAACAGTTGGAGAGAAACTTGCTCAAGCTTACCAGG
ATGTGAAGGTTGCCCTAACGAAAAATCATGGCGTTGGAACGAGACGAAACCAAAAGGAAGATCCTATTAGAACCATAATGTTCTTGGGTTCATGGAGTCACACTTGAACT
AATTTCAGTTTGTTTCATTTACAAACTATTTCTTAAAACTTTCTTTAACAACTGTATCATTAAATGGTTTATTGTAAAGGTTAGTTTATTACTTTTGTATATTAAATTAG
TTAAGAGTCACAAACTGTGATTTTGAAAGCTTTTCACAAGACACTCAACAAATAAGGAAAAATTAAAAAAAAAAAAGAAAAAGAAAAGAAAAGGTTATATCAAAGTATGT
TTTCTTACTTTAATTTTTGTTTTCACATAAATAAATTAAAGAGAAATACAATATTAAGAATATATATATATATATATATATATGTAT
Protein sequenceShow/hide protein sequence
MKVQHVCSEKSSDSSRTVGEKLAQAYQDVKVALTKNHGVGTRRNQKEDPIRTIMFLGSWSHT