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PI0021237 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021237
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlycine-rich protein family
Genome locationchr02:402784..403895
RNA-Seq ExpressionPI0021237
SyntenyPI0021237
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050947.1 uncharacterized protein E6C27_scaffold761G00740 [Cucumis melo var. makuwa]1.0e-5793.44Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MASPISFLPVVLAL VSLRCPSV GD QEI GQMVVE+FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCLDN+F NFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRG
        KATAQSVRNALRIGCSFSSQRG
Subjt:  KATAQSVRNALRIGCSFSSQRG

KAE8653344.1 hypothetical protein Csa_007318 [Cucumis sativus]7.5e-6492.25Show/hide
Query:  MVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE
        MVVE FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCLDNTFQNFLFYNKATAQSVRNALR+GCS+SSQRGNFNQGLFMQGE
Subjt:  MVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE

Query:  FSKAHNFQKWFILHYFILFLVGYCCFLIL
        FS+AH FQKWFILHY +LFLVG CCFLIL
Subjt:  FSKAHNFQKWFILHYFILFLVGYCCFLIL

XP_008450550.1 PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]1.9e-7590.12Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MASPISFLPVVLAL VSLRCPSV GD QEI GQMVVE+FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCLDN+F NFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL
        KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE SKAH FQ+WF LHY  L LVG CCFLIL
Subjt:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL

XP_022158829.1 uncharacterized protein LOC111025289 [Momordica charantia]2.3e-6075.31Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MA P +FLP++LAL VSL  PSVC   +EIPGQ+V EA +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+LVL+CLD+ F NFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL
        KA AQ+VRNALR GCS+SSQRGNFN GLFMQGE SKAH+FQKW  L Y I+ LVG CCF IL
Subjt:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL

XP_031736077.1 uncharacterized protein LOC101204762 [Cucumis sativus]1.1e-7889.51Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MASPISFLP+ LAL V LRCPSV  D QEIPGQMVVE FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCLDNTFQNFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL
        KATAQSVRNALR+GCS+SSQRGNFNQGLFMQGEFS+AH FQKWFILHY +LFLVG CCFLIL
Subjt:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL

TrEMBL top hitse value%identityAlignment
A0A0A0LYD5 Uncharacterized protein1.3e-7484.02Show/hide
Query:  MASPISFLPVVLALFVSLRCPS-------VCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTF
        MASPISFLP+ LAL V LRCPS             EIPGQMVVE FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCLDNTF
Subjt:  MASPISFLPVVLALFVSLRCPS-------VCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTF

Query:  QNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL
        QNFLFYNKATAQSVRNALR+GCS+SSQRGNFNQGLFMQGEFS+AH FQKWFILHY +LFLVG CCFLIL
Subjt:  QNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL

A0A1S3BPH6 uncharacterized protein LOC1034921179.2e-7690.12Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MASPISFLPVVLAL VSLRCPSV GD QEI GQMVVE+FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCLDN+F NFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL
        KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGE SKAH FQ+WF LHY  L LVG CCFLIL
Subjt:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL

A0A5A7U972 Uncharacterized protein5.1e-5893.44Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MASPISFLPVVLAL VSLRCPSV GD QEI GQMVVE+FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCLDN+F NFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRG
        KATAQSVRNALRIGCSFSSQRG
Subjt:  KATAQSVRNALRIGCSFSSQRG

A0A6J1E0J9 uncharacterized protein LOC1110252891.1e-6075.31Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MA P +FLP++LAL VSL  PSVC   +EIPGQ+V EA +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+LVL+CLD+ F NFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL
        KA AQ+VRNALR GCS+SSQRGNFN GLFMQGE SKAH+FQKW  L Y I+ LVG CCF IL
Subjt:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL

A0A6J1JMH7 uncharacterized protein LOC1114865298.4e-5365.22Show/hide
Query:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN
        MASP+  L ++    ++L C SVCG  +E  GQ V + F+CFDN  IYNGCESAYRLNPSG+ NVP +ATNLFCNGPCLIETQL+LNCLD+ F NFLFYN
Subjt:  MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYN

Query:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLI
        KAT  +V+NALR GCS+S+QRGNFN G FMQGE SK H  QKW  L Y++LFL+G CCF++
Subjt:  KATAQSVRNALRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)3.7e-2955.14Show/hide
Query:  GQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQ
        G +V  A  CF+N  +Y GC  A+RLN  G F VPPE T+ FCNGPC  ET+LVL C+++   +F+FYN+AT + VRNALR GCS S  RGNFN G + Q
Subjt:  GQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFNQGLFMQ

Query:  G-EFSKA
        G  F KA
Subjt:  G-EFSKA

AT5G49350.1 Glycine-rich protein family1.9e-2040.21Show/hide
Query:  EIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFN
        E P ++V +A +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC++    ++ F+N+AT   +R  L+ GCS+  +RG FN
Subjt:  EIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFN

AT5G49350.2 Glycine-rich protein family1.9e-2040.21Show/hide
Query:  EIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFN
        E P ++V +A +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC++    ++ F+N+AT   +R  L+ GCS+  +RG FN
Subjt:  EIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNALRIGCSFSSQRGNFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCAATTAGCTTCCTCCCCGTCGTTCTCGCTCTTTTTGTCTCGCTCCGCTGTCCCTCAGTTTGTGGTGATCATCAGGAGATTCCTGGACAAATGGTGGTTGA
AGCCTTCAAATGTTTTGACAACAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCTGAGGCTACTAACCTATTTT
GCAATGGACCATGTTTGATCGAAACACAACTTGTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACAGCACAAAGCGTTCGAAACGCC
CTCCGTATCGGCTGCAGCTTCTCGAGCCAGAGAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTAAAGCTCACAACTTCCAAAAATGGTTCATCCTCCA
TTATTTTATTCTTTTTCTTGTTGGGTATTGTTGTTTTCTCATCTTATAA
mRNA sequenceShow/hide mRNA sequence
CTTCACCATTTTCCAACTCTGGGTTGGCCTAACTTCCAACTGCCATTCCCAATCCCATCATCATCTTATTCCATCTATATTCACATAAATATATCATCTCCGTTCTTTTT
AATTAATTTTCCTCACTCCAATGGCTTCCCCAATTAGCTTCCTCCCCGTCGTTCTCGCTCTTTTTGTCTCGCTCCGCTGTCCCTCAGTTTGTGGTGATCATCAGGAGATT
CCTGGACAAATGGTGGTTGAAGCCTTCAAATGTTTTGACAACAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCC
TGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTGTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACAG
CACAAAGCGTTCGAAACGCCCTCCGTATCGGCTGCAGCTTCTCGAGCCAGAGAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTAAAGCTCACAACTTC
CAAAAATGGTTCATCCTCCATTATTTTATTCTTTTTCTTGTTGGGTATTGTTGTTTTCTCATCTTATAATAAATAAAAAAAAATCACATAATTAGAACATTTAA
Protein sequenceShow/hide protein sequence
MASPISFLPVVLALFVSLRCPSVCGDHQEIPGQMVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLDNTFQNFLFYNKATAQSVRNA
LRIGCSFSSQRGNFNQGLFMQGEFSKAHNFQKWFILHYFILFLVGYCCFLIL