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PI0021245 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021245
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr05:18631768..18633068
RNA-Seq ExpressionPI0021245
SyntenyPI0021245
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-4460Show/hide
Query:  GHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKV
        G  RSNN RL + ADD QQVL+ICNNN+R+M+EIH MY+   VPP +HRGRV+VEEAE DEVYHNVEE++  TQ QNQT YG  M+MMP FG GYCD +V
Subjt:  GHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKV

Query:  GTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYY----------EFRVDDDNQLNIDDVRV
         T YYDS VG SSSYMDV  STSYMH HRH    GEHNEY Y+          E++ + +NQ  ++  RV
Subjt:  GTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYY----------EFRVDDDNQLNIDDVRV

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.9e-4546.33Show/hide
Query:  MTPQFRHAKDHLLPGRAHSS-------------------QYMFDLLQRDQALHH----------------------------------------------
        + PQ  HA +HLLPGRA  S                   +YMFDLLQRDQ +                                                
Subjt:  MTPQFRHAKDHLLPGRAHSS-------------------QYMFDLLQRDQALHH----------------------------------------------

Query:  -------------STESSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDY
                        ++ GHLRSNN RL + ADD QQVLNICNNN+RYM+EIH MY+   VPPPVHRGRVRVEEAE DEVYHNVEEV   TQTQ+QT Y
Subjt:  -------------STESSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDY

Query:  GGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY
        G  M MMP FGAGY DS+VGT YYD+ +  SS YMDV  S  YMH H+ G   GEHN+Y
Subjt:  GGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-4368.97Show/hide
Query:  RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKVGTR
        RSNN RL + ADDLQQ L+ICNNNERYM+EIH MY+   VPPPVHRG VRVEEAE D+VYHNVEEV S TQTQ+QT YG  M MMP F AGYCD +VG  
Subjt:  RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKVGTR

Query:  YYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD
        YYD+ VG SSSY+DV  STSYMH H  G   GEHNEY Y+E   D
Subjt:  YYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.6e-4764.91Show/hide
Query:  MFDLLQRDQALHHSTESSCGHL----RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQN
        MFDLLQRDQ +    +    +L    RSNN RL + ADDLQQ L+ICNNNERYM+EIH MY+   VPPPVHRG VRVEEAE D+VYHNVEEV S TQTQ+
Subjt:  MFDLLQRDQALHHSTESSCGHL----RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQN

Query:  QTDYGGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD
        QT YG  M MMP F AGYCD +VG  YYD+ VG SSSY+DV  STSYMH HR G   GEHNEY Y+E   D
Subjt:  QTDYGGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.3e-4648Show/hide
Query:  MTPQFRHAKDHLLPGRAHSS----------QYMFDLLQRDQALHHSTE----------------------------------------------------
        + PQ  HA +HLLPGRA  S          +YMFDLLQRDQ +    +                                                    
Subjt:  MTPQFRHAKDHLLPGRAHSS----------QYMFDLLQRDQALHHSTE----------------------------------------------------

Query:  -------SSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPA
               ++ GHLRSNN RL + ADD QQVLNICNNN+RYM+EIH MY+   VPPPVHRGRVRVEEAE DEVYHNVEEV   TQTQ+QT YG  M MMP 
Subjt:  -------SSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPA

Query:  FGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY
        FGAGY DS+VGT YYD+ +  SS YMDV  S  YMH H+ G   GEHN+Y
Subjt:  FGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-4460Show/hide
Query:  GHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKV
        G  RSNN RL + ADD QQVL+ICNNN+R+M+EIH MY+   VPP +HRGRV+VEEAE DEVYHNVEE++  TQ QNQT YG  M+MMP FG GYCD +V
Subjt:  GHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKV

Query:  GTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYY----------EFRVDDDNQLNIDDVRV
         T YYDS VG SSSYMDV  STSYMH HRH    GEHNEY Y+          E++ + +NQ  ++  RV
Subjt:  GTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYY----------EFRVDDDNQLNIDDVRV

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.8e-4546.33Show/hide
Query:  MTPQFRHAKDHLLPGRAHSS-------------------QYMFDLLQRDQALHH----------------------------------------------
        + PQ  HA +HLLPGRA  S                   +YMFDLLQRDQ +                                                
Subjt:  MTPQFRHAKDHLLPGRAHSS-------------------QYMFDLLQRDQALHH----------------------------------------------

Query:  -------------STESSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDY
                        ++ GHLRSNN RL + ADD QQVLNICNNN+RYM+EIH MY+   VPPPVHRGRVRVEEAE DEVYHNVEEV   TQTQ+QT Y
Subjt:  -------------STESSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDY

Query:  GGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY
        G  M MMP FGAGY DS+VGT YYD+ +  SS YMDV  S  YMH H+ G   GEHN+Y
Subjt:  GGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.3e-4468.97Show/hide
Query:  RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKVGTR
        RSNN RL + ADDLQQ L+ICNNNERYM+EIH MY+   VPPPVHRG VRVEEAE D+VYHNVEEV S TQTQ+QT YG  M MMP F AGYCD +VG  
Subjt:  RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPAFGAGYCDSKVGTR

Query:  YYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD
        YYD+ VG SSSY+DV  STSYMH H  G   GEHNEY Y+E   D
Subjt:  YYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X28.0e-4864.91Show/hide
Query:  MFDLLQRDQALHHSTESSCGHL----RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQN
        MFDLLQRDQ +    +    +L    RSNN RL + ADDLQQ L+ICNNNERYM+EIH MY+   VPPPVHRG VRVEEAE D+VYHNVEEV S TQTQ+
Subjt:  MFDLLQRDQALHHSTESSCGHL----RSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQN

Query:  QTDYGGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD
        QT YG  M MMP F AGYCD +VG  YYD+ VG SSSY+DV  STSYMH HR G   GEHNEY Y+E   D
Subjt:  QTDYGGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVD

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.6e-4648Show/hide
Query:  MTPQFRHAKDHLLPGRAHSS----------QYMFDLLQRDQALHHSTE----------------------------------------------------
        + PQ  HA +HLLPGRA  S          +YMFDLLQRDQ +    +                                                    
Subjt:  MTPQFRHAKDHLLPGRAHSS----------QYMFDLLQRDQALHHSTE----------------------------------------------------

Query:  -------SSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPA
               ++ GHLRSNN RL + ADD QQVLNICNNN+RYM+EIH MY+   VPPPVHRGRVRVEEAE DEVYHNVEEV   TQTQ+QT YG  M MMP 
Subjt:  -------SSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYN---VPPPVHRGRVRVEEAEFDEVYHNVEEVSSMTQTQNQTDYGGSMMMMPA

Query:  FGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY
        FGAGY DS+VGT YYD+ +  SS YMDV  S  YMH H+ G   GEHN+Y
Subjt:  FGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCACAATTTAGACATGCAAAAGATCATCTACTACCTGGACGAGCACACAGTTCACAGTACATGTTTGACCTTCTTCAGCGTGATCAGGCTCTACATCACTCAAC
CGAGAGCAGTTGTGGGCATCTGAGATCAAACAACAGAAGACTTCATAATGGTGCAGATGATCTACAGCAAGTCCTTAATATATGTAATAATAATGAGAGGTACATGAAGG
AGATACATTATATGTACAATGTACCTCCACCAGTTCATAGGGGTCGTGTTCGAGTGGAAGAAGCTGAATTCGATGAAGTTTACCACAATGTAGAAGAAGTGTCTTCAATG
ACACAAACACAGAACCAAACTGATTATGGTGGTTCGATGATGATGATGCCAGCATTTGGAGCAGGATATTGTGATTCTAAGGTCGGTACAAGATATTATGACTCTAGGGT
TGGTCGATCGTCTTCATACATGGATGTCGATCAATCAACTTCTTACATGCATAGACACAGACACGGATGCAGCAGCGGAGAACATAACGAATATACGTACTATGAGTTCA
GAGTCGATGACGACAACCAGCTCAACATCGACGACGTTCGGGTTGTGGAATACATTGATTTTTTTTTTATCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCACAATTTAGACATGCAAAAGATCATCTACTACCTGGACGAGCACACAGTTCACAGTACATGTTTGACCTTCTTCAGCGTGATCAGGCTCTACATCACTCAAC
CGAGAGCAGTTGTGGGCATCTGAGATCAAACAACAGAAGACTTCATAATGGTGCAGATGATCTACAGCAAGTCCTTAATATATGTAATAATAATGAGAGGTACATGAAGG
AGATACATTATATGTACAATGTACCTCCACCAGTTCATAGGGGTCGTGTTCGAGTGGAAGAAGCTGAATTCGATGAAGTTTACCACAATGTAGAAGAAGTGTCTTCAATG
ACACAAACACAGAACCAAACTGATTATGGTGGTTCGATGATGATGATGCCAGCATTTGGAGCAGGATATTGTGATTCTAAGGTCGGTACAAGATATTATGACTCTAGGGT
TGGTCGATCGTCTTCATACATGGATGTCGATCAATCAACTTCTTACATGCATAGACACAGACACGGATGCAGCAGCGGAGAACATAACGAATATACGTACTATGAGTTCA
GAGTCGATGACGACAACCAGCTCAACATCGACGACGTTCGGGTTGTGGAATACATTGATTTTTTTTTTATCTTTTAA
Protein sequenceShow/hide protein sequence
MTPQFRHAKDHLLPGRAHSSQYMFDLLQRDQALHHSTESSCGHLRSNNRRLHNGADDLQQVLNICNNNERYMKEIHYMYNVPPPVHRGRVRVEEAEFDEVYHNVEEVSSM
TQTQNQTDYGGSMMMMPAFGAGYCDSKVGTRYYDSRVGRSSSYMDVDQSTSYMHRHRHGCSSGEHNEYTYYEFRVDDDNQLNIDDVRVVEYIDFFFIF