; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021249 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021249
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr11:19964997..19965652
RNA-Seq ExpressionPI0021249
SyntenyPI0021249
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]7.4e-5066.11Show/hide
Query:  MDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFNIVNAMKFLKN
        MDLGR L DLGASINL+PLSIFKKL IWE+QPT MRLQFVDRSI  PEGKIEDVLVK   FL +   +I  ++   EL+M F+DEEIKFN   +MKF  N
Subjt:  MDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFNIVNAMKFLKN

Query:  DECCNAIESLGWDYCEEEISSELLSPEEFFEE--PKYIIKEVNVVSGVRKSEPLDLQTKGAKKNRPSIEERLELELKPLP
        D   NAIESLGWDYC+EE   EL S EEFFEE  P YI++EVNV+ G  K E LDL+TKG KK + SIEE  E+ELKPLP
Subjt:  DECCNAIESLGWDYCEEEISSELLSPEEFFEE--PKYIIKEVNVVSGVRKSEPLDLQTKGAKKNRPSIEERLELELKPLP

TYK25836.1 uncharacterized protein E5676_scaffold436G00440 [Cucumis melo var. makuwa]2.4e-4065.25Show/hide
Query:  SFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFN
        SFT+PCSIGGMDL R LC+LG SINL+ LSIFKKL I  +QPT+M LQFVDRSI  P+GK EDVLVKVDKFLF  DFVILDYE  RE+    +DEE+KF+
Subjt:  SFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFN

Query:  IVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFE
        I+N MKF  + E CNAI+S GWDY EEEI +  +    F E
Subjt:  IVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFE

XP_038874990.1 uncharacterized protein LOC120067513 [Benincasa hispida]1.1e-4050.69Show/hide
Query:  KNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR----------
        KN GSFTVPCSIGG+D+G  LCDLGASINL+PLSIFKKLGI E QPT + L   DR+I  PEGKIEDVLVKVD  +F  DF+ILDYEADR          
Subjt:  KNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR----------

Query:  -------------ELTMRFHDEEIKFNIVNAMKFLKNDEC-CNAIESLGWDYCEEEIS-SELLSPEEFFEEPKYIIKEVNVVSGVRKSEPLDLQTKGAKK
                     ELT+R  +EEIKFN++NA+KF  +++C  N+IE       EEE +  E+L+ EE                 +++SEP  L  + AK 
Subjt:  -------------ELTMRFHDEEIKFNIVNAMKFLKNDEC-CNAIESLGWDYCEEEIS-SELLSPEEFFEEPKYIIKEVNVVSGVRKSEPLDLQTKGAKK

Query:  NRPSIEERLELELKPLP
         RPS+EE  ELELK LP
Subjt:  NRPSIEERLELELKPLP

XP_038885989.1 uncharacterized protein LOC120076294 [Benincasa hispida]6.9e-4046.76Show/hide
Query:  KNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR----------
        K+ GSFTVPCSIGG+D+G  LCDLGASINL+PLSIFKKLGI E QPT + LQ  +R+I  PEG+IEDVLVKVD F+F  DF+ILDYE DR          
Subjt:  KNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR----------

Query:  -------------ELTMRFHDEEIKFNIVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFEEPKYIIKEVNVVSGVRKSEPLDLQTKGAKKNR
                     ELTMR  ++E+KFN++NA+KF  +++C                    L   E  EE  ++ K + +   +++ EP  L  +  K  R
Subjt:  -------------ELTMRFHDEEIKFNIVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFEEPKYIIKEVNVVSGVRKSEPLDLQTKGAKKNR

Query:  PSIEERLELELKPLPT
        PS+EE  ELELKPLP+
Subjt:  PSIEERLELELKPLPT

XP_038896012.1 uncharacterized protein LOC120084193 [Benincasa hispida]4.1e-4047.93Show/hide
Query:  KNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR----------
        K+ GSFT+PCSIG +D+G  LCDLGASINL+PLSIFKKLGI E QPT + LQ  DR+I  PEG IEDVLVKVD F+FL DF+ILD EADR          
Subjt:  KNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR----------

Query:  -------------ELTMRFHDEEIKFNIVNAMKFLKNDEC-CNAIESLGWDYCEEEISSELLSPEEFFEEPKYIIKEVNVVSGVRKSEPLDLQTKGAKKN
                     ELTMR  ++E+KFN++NA+KF  N++C  N+IE                 PEE     +  + EV  +  +++S PL L  +  K  
Subjt:  -------------ELTMRFHDEEIKFNIVNAMKFLKNDEC-CNAIESLGWDYCEEEISSELLSPEEFFEEPKYIIKEVNVVSGVRKSEPLDLQTKGAKKN

Query:  RPSIEERLELELKPLPT
         PS+EE  ELELK LP+
Subjt:  RPSIEERLELELKPLPT

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900552.8e-3962.5Show/hide
Query:  GSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR-------------
        GSF VPCSI GMDLG  LCDLGASINL+PLSIFKKL I E+QPT+MR Q  DRSI  P+GKIEDVLVKVDKFLF  DF+ILDYEAD              
Subjt:  GSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR-------------

Query:  ----------ELTMRFHDEEIKFNIVNAMKFLKNDECCNAIESL
                  ELT+ F+++EIKFN++NAMKF  +DE CN IESL
Subjt:  ----------ELTMRFHDEEIKFNIVNAMKFLKNDECCNAIESL

A0A5A7UE99 Uncharacterized protein3.6e-5066.11Show/hide
Query:  MDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFNIVNAMKFLKN
        MDLGR L DLGASINL+PLSIFKKL IWE+QPT MRLQFVDRSI  PEGKIEDVLVK   FL +   +I  ++   EL+M F+DEEIKFN   +MKF  N
Subjt:  MDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFNIVNAMKFLKN

Query:  DECCNAIESLGWDYCEEEISSELLSPEEFFEE--PKYIIKEVNVVSGVRKSEPLDLQTKGAKKNRPSIEERLELELKPLP
        D   NAIESLGWDYC+EE   EL S EEFFEE  P YI++EVNV+ G  K E LDL+TKG KK + SIEE  E+ELKPLP
Subjt:  DECCNAIESLGWDYCEEEISSELLSPEEFFEE--PKYIIKEVNVVSGVRKSEPLDLQTKGAKKNRPSIEERLELELKPLP

A0A5A7UF79 Uncharacterized protein4.5e-3750.77Show/hide
Query:  MKNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDE
        M N  SFTVPCSIG MDLGR LC+L  SINL+ LSIFKKL I E+QPT++RL F D+ I  PE KI+D                                
Subjt:  MKNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDE

Query:  EIKFNIVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFEE--PKYIIKEVNVVSGVRKSEPLDLQTKGAKKNRPSIEERLELELKPLP
                   F  +DE CN IE LGW+Y E+E   EL S EEFFEE  P YI+KEVNVVS  +K E LDLQ KG KK +PSIEE  ELELK LP
Subjt:  EIKFNIVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFEE--PKYIIKEVNVVSGVRKSEPLDLQTKGAKKNRPSIEERLELELKPLP

A0A5A7VJ95 Uncharacterized protein2.3e-3661.81Show/hide
Query:  SFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR--------------
        SFTVPCSI  MDLG  LCDLGASINL+PLSIFKKL I E+QP +MRLQFVDRSI   EGKIED+LVKVDKFLF  DF+ILDYEA++              
Subjt:  SFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADR--------------

Query:  ---------ELTMRFHDEEIKFNIVNAMKFLKNDECCNAIESLG
                 ELTMRF+D E+KFN++NAMKF  +D+  + IESLG
Subjt:  ---------ELTMRFHDEEIKFNIVNAMKFLKNDECCNAIESLG

A0A5D3DQ91 RT_RNaseH_2 domain-containing protein1.2e-4065.25Show/hide
Query:  SFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFN
        SFT+PCSIGGMDL R LC+LG SINL+ LSIFKKL I  +QPT+M LQFVDRSI  P+GK EDVLVKVDKFLF  DFVILDYE  RE+    +DEE+KF+
Subjt:  SFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFN

Query:  IVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFE
        I+N MKF  + E CNAI+S GWDY EEEI +  +    F E
Subjt:  IVNAMKFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATCGTGGTAGCTTCACGGTGCCTTGTTCGATAGGCGGGATGGATCTAGGTCGCACACTATGTGACCTGGGAGCGAGCATCAATTTGATACCTCTTTCTATCTT
CAAGAAATTAGGGATATGGGAGTTGCAACCAACATACATGAGGCTCCAATTTGTTGATAGATCCATTGTCACGCCTGAGGGCAAGATCGAAGATGTTTTGGTAAAAGTGG
ATAAATTTTTGTTCCTCACCGACTTCGTTATTCTGGATTACGAAGCGGATCGAGAGTTGACAATGCGCTTTCATGATGAAGAAATCAAATTCAACATTGTCAACGCGATG
AAATTTCTCAAAAATGATGAATGCTGCAACGCAATAGAATCGCTGGGGTGGGATTATTGCGAGGAAGAAATTAGTTCTGAACTACTCAGCCCTGAAGAATTCTTTGAAGA
ACCCAAATATATAATAAAGGAAGTAAATGTCGTGTCTGGCGTAAGAAAATCAGAACCTTTGGATTTGCAAACCAAAGGCGCTAAGAAAAATAGGCCATCAATTGAGGAAC
GACTAGAGTTAGAGCTCAAGCCTTTACCAACCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATCGTGGTAGCTTCACGGTGCCTTGTTCGATAGGCGGGATGGATCTAGGTCGCACACTATGTGACCTGGGAGCGAGCATCAATTTGATACCTCTTTCTATCTT
CAAGAAATTAGGGATATGGGAGTTGCAACCAACATACATGAGGCTCCAATTTGTTGATAGATCCATTGTCACGCCTGAGGGCAAGATCGAAGATGTTTTGGTAAAAGTGG
ATAAATTTTTGTTCCTCACCGACTTCGTTATTCTGGATTACGAAGCGGATCGAGAGTTGACAATGCGCTTTCATGATGAAGAAATCAAATTCAACATTGTCAACGCGATG
AAATTTCTCAAAAATGATGAATGCTGCAACGCAATAGAATCGCTGGGGTGGGATTATTGCGAGGAAGAAATTAGTTCTGAACTACTCAGCCCTGAAGAATTCTTTGAAGA
ACCCAAATATATAATAAAGGAAGTAAATGTCGTGTCTGGCGTAAGAAAATCAGAACCTTTGGATTTGCAAACCAAAGGCGCTAAGAAAAATAGGCCATCAATTGAGGAAC
GACTAGAGTTAGAGCTCAAGCCTTTACCAACCACCTGA
Protein sequenceShow/hide protein sequence
MKNRGSFTVPCSIGGMDLGRTLCDLGASINLIPLSIFKKLGIWELQPTYMRLQFVDRSIVTPEGKIEDVLVKVDKFLFLTDFVILDYEADRELTMRFHDEEIKFNIVNAM
KFLKNDECCNAIESLGWDYCEEEISSELLSPEEFFEEPKYIIKEVNVVSGVRKSEPLDLQTKGAKKNRPSIEERLELELKPLPTT