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PI0021254 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021254
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S rib s in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationchr09:4720183..4721011
RNA-Seq ExpressionPI0021254
SyntenyPI0021254
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032525.1 hypothetical protein SDJN02_06574, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-6785.43Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+KKRDDHK  SRSNTLKDLFVSSPPY  SD  +NET   AP 
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT

Query:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        RNVTPVC+E E+G++G  GWHPGSPRPGWTGFRYKYLLRKTWRP+L GIPE
Subjt:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_008467191.1 PREDICTED: uncharacterized protein LOC103504599 [Cucumis melo]8.5e-7091.61Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALPE KKRDDHKG SRSNTLKDLFVSSPPYVG+DC V+ETAVT
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT

Query:  APTRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APT+N TPVC KEKEEG+VGS GW+PGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_011655483.1 uncharacterized protein LOC105435544 [Cucumis sativus]7.7e-7190.85Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRR+LPE K RDD KG SRSNTLKDLFVSSPPY+G+DC V++TAVTAP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAP

Query:  TRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        TRNVTPVC KEKEEG VGS GW+PGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  TRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_023513243.1 uncharacterized protein LOC111777755 [Cucurbita pepo subsp. pepo]8.0e-6885.43Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+KKRDDHK  SRSNTLKDLFVSSPPY  S+C +NET   AP 
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT

Query:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        RNVTPVC+E E+G++G  GWHPGSPRPGWTGFRYKYLLRKTWRP+L GIPE
Subjt:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

XP_038875200.1 uncharacterized protein LOC120067717 [Benincasa hispida]6.5e-7088.74Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSP RRALPEKKRDDHK  SRSNTLKDLFVSSPPYV +D  ++ETAV APT
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT

Query:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        R+ T VCKEKE+G+VGSAGW+PGSPRPGWTGFRYKYLLRKTWRPVL GIPE
Subjt:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KPK6 Uncharacterized protein3.7e-7190.85Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAP
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRR+LPE K RDD KG SRSNTLKDLFVSSPPY+G+DC V++TAVTAP
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAP

Query:  TRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        TRNVTPVC KEKEEG VGS GW+PGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  TRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A1S3CSY3 uncharacterized protein LOC1035045994.1e-7091.61Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALPE KKRDDHKG SRSNTLKDLFVSSPPYVG+DC V+ETAVT
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT

Query:  APTRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APT+N TPVC KEKEEG+VGS GW+PGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A5D3BMD8 Uncharacterized protein4.1e-7091.61Show/hide
Query:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT
        MASLLKFKLLPTH CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR RALPE KKRDDHKG SRSNTLKDLFVSSPPYVG+DC V+ETAVT
Subjt:  MASLLKFKLLPTH-CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRR-RALPE-KKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT

Query:  APTRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        APT+N TPVC KEKEEG+VGS GW+PGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
Subjt:  APTRNVTPVC-KEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A6J1HGM7 uncharacterized protein LOC1114633733.1e-6583.44Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS RRSPRRRALP+KKRDDHK  SRSNTLKDLFVSSPPY  SD  +NET   AP 
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT

Query:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        RNVTPVC+E E+G++G   WHPGSPRPGWTGFR+KYLLRKTWRP+L  IPE
Subjt:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

A0A6J1I9M9 uncharacterized protein LOC1114704932.2e-6382.78Show/hide
Query:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT
        MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS     RRRALP+KKRDDHK  SRSNTLKDLFVSSPPY  SD  +NET   AP 
Subjt:  MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPT

Query:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        RNVTPVC+E E+G++G  GWHPGSPRPGWTGFRYKYLLRKTWRP+L GIPE
Subjt:  RNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66890.1 FUNCTIONS IN: molecular_function unknown7.5e-1645.06Show/hide
Query:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPR-RRALPEKKRDDHKGFSRSN-TLKDLFVSSPPYV------GSDCAVN
        SL KFKLL THC  VA+SPT     SP++HLRRRK TLR+LLTR+S R R P  +  + E K+ D +G  RS+  L DLFVSSPP+       G D    
Subjt:  SLLKFKLLPTHCG-VAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGR-RSPR-RRALPEKKRDDHKGFSRSN-TLKDLFVSSPPYV------GSDCAVN

Query:  ---ETAVTAPTRNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
           E     P   V+      EE      G++ GS RP  +      LLR++WRPVLV IPE
Subjt:  ---ETAVTAPTRNVTPVCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE

AT1G68430.1 unknown protein4.6e-1341.72Show/hide
Query:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT
        MA+L +FK L T CGV AQSPT   SPRTSPLV LRR+KTTL+MLL+      SP RR         HK  +    LKDLFVSS            +A  
Subjt:  MASLLKFKLLPTHCGV-AQSPTL--SPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVT

Query:  APTRNVTPVCKEKEEGQVGSAGWHPGSPR---------PGWTGFRYKYLLRKTWRPVLVGIPE
            +  P  K KEE     A     + R         P W GF  K LL++ WRP L  I E
Subjt:  APTRNVTPVCKEKEEGQVGSAGWHPGSPR---------PGWTGFRYKYLLRKTWRPVLVGIPE

AT5G16200.1 50S ribosomal protein-related1.6e-1037.79Show/hide
Query:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS-GRRSPRRRALPE----------KKRDDHKGFSRSNTLKDLFVS--SPP
        ++ L KFKL   H       A SPT+SP  SP+ +LRRRK TLRML  ++S  RR   R+ L E          KKR +H+   R   L++L V+  SPP
Subjt:  MASLLKFKLLPTH----CGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNS-GRRSPRRRALPE----------KKRDDHKGFSRSNTLKDLFVS--SPP

Query:  YVGSD--CAVNETAVTAPTRNVTP--VCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE
        Y G +    + E        NVT     +E    + GS+G            FR + +LRK WRPVLV IPE
Subjt:  YVGSD--CAVNETAVTAPTRNVTP--VCKEKEEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGCCCTAGGACGAGTCCTCTCGTTCACCTCCGCCGCCGGAAAAC
CACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTACCAGAGAAGAAGAGAGACGACCATAAGGGTTTTTCGCGGAGTAACACGT
TGAAGGATTTGTTTGTTTCATCGCCACCGTATGTTGGGAGTGACTGTGCTGTTAACGAGACGGCGGTCACAGCTCCAACCCGGAACGTAACTCCAGTTTGTAAGGAGAAG
GAGGAGGGTCAGGTTGGATCAGCCGGTTGGCATCCCGGTTCACCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGAAAACTTGGCGGCCGGTGCTCGT
CGGAATCCCCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ACTGGGAAAATGAACCAACTTTTTTCCTCTCTTCCTTCAAAATTCAATAAATTTCTCTTTCAATTCAAAGTTTTAGACTAAAAAATAATGAAACCCCAAAAAGAAAAATG
AAAAAACAAACCCCATTTCCCAACGCTCTCAAAAATCCTCTCCGAATTCCCCTCTTCAATCATTACAAATTTTCAAATTCCATTCCAAAACTCCATTGATCGATTCAACA
ATTCTTCCTCTTAGCTTTCTCCATGGCGTCGCTTCTCAAATTCAAGCTCCTTCCGACGCACTGCGGCGTCGCTCAGAGTCCCACTTTAAGCCCTAGGACGAGTCCTCTCG
TTCACCTCCGCCGCCGGAAAACCACTCTTCGGATGCTTCTCACTCGGAATTCCGGCCGTCGGTCTCCTCGCCGCCGCGCCTTACCAGAGAAGAAGAGAGACGACCATAAG
GGTTTTTCGCGGAGTAACACGTTGAAGGATTTGTTTGTTTCATCGCCACCGTATGTTGGGAGTGACTGTGCTGTTAACGAGACGGCGGTCACAGCTCCAACCCGGAACGT
AACTCCAGTTTGTAAGGAGAAGGAGGAGGGTCAGGTTGGATCAGCCGGTTGGCATCCCGGTTCACCTAGACCGGGTTGGACCGGTTTCCGATATAAATACTTGCTTCGGA
AAACTTGGCGGCCGGTGCTCGTCGGAATCCCCGAGTAATGGATGATCTTTTTTTTTTTTTTTTTAATTTAAAAAAAAACATCTTTTAATTAATTTAAAAATATATCTGAT
CTAATATTTGTATGTTTTTTTAGTATAGTTTGTAATTTTTACTTAAAATAGGGTGGGGG
Protein sequenceShow/hide protein sequence
MASLLKFKLLPTHCGVAQSPTLSPRTSPLVHLRRRKTTLRMLLTRNSGRRSPRRRALPEKKRDDHKGFSRSNTLKDLFVSSPPYVGSDCAVNETAVTAPTRNVTPVCKEK
EEGQVGSAGWHPGSPRPGWTGFRYKYLLRKTWRPVLVGIPE