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PI0021256 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021256
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr04:22470325..22471185
RNA-Seq ExpressionPI0021256
SyntenyPI0021256
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]6.6e-2344.12Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL
        ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    +++W++ P GA PF    + L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL

Query:  CLKVVPFLSAIQTISIPGALCNQMALNRMITFHGHK
         +K  P L   Q + +   +C    L+R IT H +K
Subjt:  CLKVVPFLSAIQTISIPGALCNQMALNRMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]8.9e-2854.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA

Query:  LCLKVV-PFLSAIQTISIPGALCN
        LCLK +      I  I + G  CN
Subjt:  LCLKVV-PFLSAIQTISIPGALCN

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]1.6e-2448.78Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL
        +EALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  +++ E+I   I +W++ P+GA PFP  IE L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL

Query:  CLKVVPFL-SAIQTISIPGALCN
        CL+    L  + Q   +   +CN
Subjt:  CLKVVPFL-SAIQTISIPGALCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-2856.67Show/hide
Query:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTI
        +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCI+ KK INL E+I  +IL+WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTI

Query:  EALCLKVVPFLSAIQTISIP
        E LCLK +P L      +IP
Subjt:  EALCLKVVPFLSAIQTISIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]8.9e-2854.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA

Query:  LCLKVV-PFLSAIQTISIPGALCN
        LCLK +      I  I + G  CN
Subjt:  LCLKVV-PFLSAIQTISIPGALCN

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase4.3e-2854.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA

Query:  LCLKVV-PFLSAIQTISIPGALCN
        LCLK +      I  I + G  CN
Subjt:  LCLKVV-PFLSAIQTISIPGALCN

A0A5A7V6M5 Gag/pol protein8.7e-2956.67Show/hide
Query:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTI
        +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++  ++LYCI+ KK INL E+I  +IL+WM  PK AMPFPS +
Subjt:  MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTI

Query:  EALCLKVVPFLSAIQTISIP
        E LCLK +P L      +IP
Subjt:  EALCLKVVPFLSAIQTISIP

A0A5D3CVL7 Uncharacterized protein4.3e-2854.84Show/hide
Query:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA
        A++ +++I WP A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ 
Subjt:  AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEA

Query:  LCLKVV-PFLSAIQTISIPGALCN
        LCLK +      I  I + G  CN
Subjt:  LCLKVV-PFLSAIQTISIPGALCN

A0A5D3CW17 Uncharacterized protein3.2e-2344.12Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL
        ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E  MLLY      + N  E+    +++W++ P GA PF    + L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL

Query:  CLKVVPFLSAIQTISIPGALCNQMALNRMITFHGHK
         +K  P L   Q + +   +C    L+R IT H +K
Subjt:  CLKVVPFLSAIQTISIPGALCNQMALNRMITFHGHK

A0A5D3DVQ6 Uncharacterized protein7.6e-2548.78Show/hide
Query:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL
        +EALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  +++ E+I   I +W++ P+GA PFP  IE L
Subjt:  REALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEAL

Query:  CLKVVPFL-SAIQTISIPGALCN
        CL+    L  + Q   +   +CN
Subjt:  CLKVVPFL-SAIQTISIPGALCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTGAAGCACTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAGCTAACCACTGAAGCAAGCGT
GTGGTTGTTCTTTATCAAGAAGAAGATCTTCCCAACGCGCCATGATAGCACCATCAATTTAGAGTCAGCGATGCTACTCTATTGTATCCTGGCGAAGAAGCGTATTAACC
TTGGCGAACTTATAGCCACATCCATTCTGTCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCCTTAAAGTTGTTCCATTCTTA
TCTGCCATCCAAACCATCTCAATACCAGGCGCGCTGTGTAATCAAATGGCCTTGAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATT
AGGCGACACACCTGAAGGAATGGCCCATACAGAAAGAAAAAGGAAATCCTTAGTTGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGATGAAGC
AGCCTCTACTGAAATTTCTCCACTCCTCATCTCGCCCAATACAGCGAGCTCCCCCATCAGTCCAAAATTTCAGCAGCTCCAACCCTCCCCGCTCTTCTTCGCCCATTCTA
ATCACCCCACCATCACCAAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTCATTCCCCTCCCAACATCCTTCACCTTTCCCCACGACTGCCTACCCCTCCGCCCAC
AAAATCTACTTCTCCCCTTCCTTCCAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCTTTTTACTCTTTCGCCCATCATGGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGTGAAGCACTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAGCTAACCACTGAAGCAAGCGT
GTGGTTGTTCTTTATCAAGAAGAAGATCTTCCCAACGCGCCATGATAGCACCATCAATTTAGAGTCAGCGATGCTACTCTATTGTATCCTGGCGAAGAAGCGTATTAACC
TTGGCGAACTTATAGCCACATCCATTCTGTCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCCTTAAAGTTGTTCCATTCTTA
TCTGCCATCCAAACCATCTCAATACCAGGCGCGCTGTGTAATCAAATGGCCTTGAACCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATT
AGGCGACACACCTGAAGGAATGGCCCATACAGAAAGAAAAAGGAAATCCTTAGTTGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGATGAAGC
AGCCTCTACTGAAATTTCTCCACTCCTCATCTCGCCCAATACAGCGAGCTCCCCCATCAGTCCAAAATTTCAGCAGCTCCAACCCTCCCCGCTCTTCTTCGCCCATTCTA
ATCACCCCACCATCACCAAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTCATTCCCCTCCCAACATCCTTCACCTTTCCCCACGACTGCCTACCCCTCCGCCCAC
AAAATCTACTTCTCCCCTTCCTTCCAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCTTTTTACTCTTTCGCCCATCATGGACCTGA
Protein sequenceShow/hide protein sequence
MAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRINLGELIATSILSWMRAPKGAMPFPSTIEALCLKVVPFL
SAIQTISIPGALCNQMALNRMITFHGHKEMERRAKTLGDTPEGMAHTERKRKSLVVASTPPPKAKKTKVLAMKQPLLKFLHSSSRPIQRAPPSVQNFSSSNPPRSSSPIL
ITPPSPNISPRHSPLPHIHSPPNILHLSPRLPTPPPTKSTSPLPSNHPHQGELNPFRFLLFRPSWT