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PI0021263 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021263
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiongag_pre-integrs domain-containing protein
Genome locationchr09:10904038..10904264
RNA-Seq ExpressionPI0021263
SyntenyPI0021263
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043083.1 uncharacterized protein E6C27_scaffold158G00210 [Cucumis melo var. makuwa]5.7e-1568Show/hide
Query:  MRVIQTQNHQEVVENKIIR----------GGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
        ++VIQTQ HQEV E+ IIR          GGMTKD+LNVIIVINS I+ GNAEIELKK+QI+LRKMKK VI HCF
Subjt:  MRVIQTQNHQEVVENKIIR----------GGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
KAA0058597.1 retrotransposon protein [Cucumis melo var. makuwa]5.2e-0865.45Show/hide
Query:  EVVENKIIRGGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
        +V +++I+ GGMTKD LNVIIVIN  II GNAEIE KK+Q +L+ MKK VI HCF
Subjt:  EVVENKIIRGGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
XP_031737535.1 uncharacterized protein LOC105435097 [Cucumis sativus]7.0e-0583.33Show/hide
Query:  TKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKK
        TKD+LNVIIVIN  II GNAEIELKK+QI+LRKMKK
Subjt:  TKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKK
TrEMBL top hitse value%identityAlignment
A0A5A7TIB1 Uncharacterized protein2.8e-1568Show/hide
Query:  MRVIQTQNHQEVVENKIIR----------GGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
        ++VIQTQ HQEV E+ IIR          GGMTKD+LNVIIVINS I+ GNAEIELKK+QI+LRKMKK VI HCF
Subjt:  MRVIQTQNHQEVVENKIIR----------GGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
A0A5A7UV40 Retrotransposon protein2.5e-0865.45Show/hide
Query:  EVVENKIIRGGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
        +V +++I+ GGMTKD LNVIIVIN  II GNAEIE KK+Q +L+ MKK VI HCF
Subjt:  EVVENKIIRGGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
A0A5C7HBT8 gag_pre-integrs domain-containing protein6.4e-0445.31Show/hide
Query:  RVIQTQNHQEVVENKIIRGGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
        RV++ ++ Q   E+K++  GMTK KL++IIVIN    PGNA+ E KKI   L++  K V  H F
Subjt:  RVIQTQNHQEVVENKIIRGGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTAATTCAAACTCAAAATCATCAAGAGGTCGTGGAAAACAAAATTATTCGAGGAGGTATGACAAAAGACAAGTTGAATGTTATAATTGTCATAAATTCGACCAT
TATTCCTGGGAATGCAGAAATAGAGTTGAAGAAAATACAAATTATACTAAGAAAGATGAAGAAACCGGTGATTCATCATTGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTAATTCAAACTCAAAATCATCAAGAGGTCGTGGAAAACAAAATTATTCGAGGAGGTATGACAAAAGACAAGTTGAATGTTATAATTGTCATAAATTCGACCAT
TATTCCTGGGAATGCAGAAATAGAGTTGAAGAAAATACAAATTATACTAAGAAAGATGAAGAAACCGGTGATTCATCATTGCTTCTAG
Protein sequenceShow/hide protein sequence
MRVIQTQNHQEVVENKIIRGGMTKDKLNVIIVINSTIIPGNAEIELKKIQIILRKMKKPVIHHCF