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PI0021268 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021268
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box domain-containing protein
Genome locationchr01:5828602..5828961
RNA-Seq ExpressionPI0021268
SyntenyPI0021268
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033778.1 putative F-box protein PP2-B12 [Cucumis melo var. makuwa]3.0e-3890.22Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLL
        MNELPA+CVG+ILAFTSLKDVCRLAGVSSVFRSA+DS+FVWKNFVPVNYKEIII SSASSFCSFLN LLKKPLYIGTGN SV+FFFFFF LL
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLL

KGN43164.1 hypothetical protein Csa_020481 [Cucumis sativus]2.1e-3181.44Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWK-NFVPVNYKEIIIA-SSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLS
        MNELPADCVG ILAFTSLKDVCRLAGVSSVFRSA+DS+F+ K NFVPVNYKEIII+ SSASSFCSFLNSLLKKPLY GT NNSV+FF    LL++ S
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWK-NFVPVNYKEIIIA-SSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLS

XP_004134006.3 putative F-box protein PP2-B12 [Cucumis sativus]6.2e-1552.17Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV
        +N+LPA+C+  ILAFTS KD CR A  S  FRSA+DS+ +W  F+P +Y++II  +S+SS  SFLNSL KK LY         IG+GN+S V
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV

XP_004134378.3 putative F-box protein PP2-B12 [Cucumis sativus]1.2e-1552.17Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV
        +N+LPA+C+  ILAFTS KD CR A  S  FRSA+DS+ +W  F+P +Y++II  +S+SS  SFLNSL KK LY         IG+GN+S V
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV

XP_038905036.1 LOW QUALITY PROTEIN: putative F-box protein PP2-B12 [Benincasa hispida]6.2e-1552.22Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNS
        +N+LP +C+  ILAFTS KD CR A VS  FRSA DS+ +W NF+P +Y++II  +S+SS   FLNSL KK LY         IG+GN+S
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNS

TrEMBL top hitse value%identityAlignment
A0A0A0K2B9 Uncharacterized protein1.0e-3181.44Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWK-NFVPVNYKEIIIA-SSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLS
        MNELPADCVG ILAFTSLKDVCRLAGVSSVFRSA+DS+F+ K NFVPVNYKEIII+ SSASSFCSFLNSLLKKPLY GT NNSV+FF    LL++ S
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWK-NFVPVNYKEIIIA-SSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLS

A0A0A0L445 F-box domain-containing protein3.9e-1551.09Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV
        +N+LPA+C+  ILAFTS KD CR A  S  FRSA+DS+ +W  F+P +Y++II  +S+SS  S LNSL KK LY         IG+GN+S V
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV

A0A0A0L9G5 F-box domain-containing protein3.9e-1552.17Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV
        +N+LPA+C+  ILAFTS KD CR A VS  FRSA+DS+ +W  F+P +Y++II  +S+SS  SFLNSL KK LY         IG+GN+  V
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY---------IGTGNNSVV

A0A5A7ST40 Putative F-box protein PP2-B121.5e-3890.22Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLL
        MNELPA+CVG+ILAFTSLKDVCRLAGVSSVFRSA+DS+FVWKNFVPVNYKEIII SSASSFCSFLN LLKKPLYIGTGN SV+FFFFFF LL
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLL

A0A6J1BT05 putative F-box protein PP2-B125.1e-1556.76Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY
        M+ LPADC+ +I+AFTS KD+C  A VSS FRSA++SN +WK F+P +Y+EII  + +SS  S LNSL +K LY
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLY

SwissProt top hitse value%identityAlignment
Q6NPT8 F-box protein PP2-B11.2e-0833.75Show/hide
Query:  LPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV
        LP DC+ ++++ TS +D C +A VS   +SA+ S+ VW+ F+P  Y  +++ S+        N L KK +++   +NSV+
Subjt:  LPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV

Q949S5 F-box protein PP2-B114.0e-0953.06Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNY
        MN LP DC+ +IL+ T+  DVCRL+ VSS+FRSA+ S+ VW +F+P ++
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNY

Q9FLU7 Putative F-box protein PP2-B123.4e-0839.02Show/hide
Query:  ELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCS---FLNSLLKKPLYIGTGNNS
        +LP +C+  +++FTS  D CR++ VS + RSA+DSN  W+ F+P +Y+ + I +S S F +   FL    + PL I  G  S
Subjt:  ELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCS---FLNSLLKKPLYIGTGNNS

Q9FV02 F-box protein SKIP39.0e-0938.55Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSA-SSFCSFLNSLLKKPLYIGTGNNSV
        ++ LP  C+  I++FTS +D C  A VS +F SA  S+ VW+ F+P +Y+ +I  S   SS      SL   PL I  G  S+
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSA-SSFCSFLNSLLKKPLYIGTGNNSV

Q9ZVQ8 Putative F-box protein PP2-B86.2e-1040.96Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV
        +++LP +CV  I++FTS +D C LA VS  F SA  S+ VW+ F+P  Y+ +I  S A  F S      KK LY    + SV+
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV

Arabidopsis top hitse value%identityAlignment
AT1G56240.1 phloem protein 2-B132.4e-0952.63Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASS
        M  LP  CV  ILAFTS  D    + VSSVFR A DS+FVW+ F+P +YK +I  S+
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASS

AT1G80110.1 phloem protein 2-B112.9e-1053.06Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNY
        MN LP DC+ +IL+ T+  DVCRL+ VSS+FRSA+ S+ VW +F+P ++
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNY

AT2G02230.1 phloem protein 2-B18.3e-1033.75Show/hide
Query:  LPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV
        LP DC+ ++++ TS +D C +A VS   +SA+ S+ VW+ F+P  Y  +++ S+        N L KK +++   +NSV+
Subjt:  LPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV

AT2G02340.1 phloem protein 2-B84.4e-1140.96Show/hide
Query:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV
        +++LP +CV  I++FTS +D C LA VS  F SA  S+ VW+ F+P  Y+ +I  S A  F S      KK LY    + SV+
Subjt:  MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVV

AT5G24560.1 phloem protein 2-B122.4e-0939.02Show/hide
Query:  ELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCS---FLNSLLKKPLYIGTGNNS
        +LP +C+  +++FTS  D CR++ VS + RSA+DSN  W+ F+P +Y+ + I +S S F +   FL    + PL I  G  S
Subjt:  ELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCS---FLNSLLKKPLYIGTGNNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAACTACCGGCGGATTGTGTTGGTCAGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCAGCGTCTGATTC
AAATTTTGTGTGGAAGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTGCATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCT
ATATAGGCACAGGAAACAACTCGGTAGTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTGAGTTGGTTAGCTAATTTAATTGAATTTTTGAGGAAAAAAAACAGGGTC
TTATTTTGGATAAACAAAGTGAGAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAACTACCGGCGGATTGTGTTGGTCAGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCAGCGTCTGATTC
AAATTTTGTGTGGAAGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTGCATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCT
ATATAGGCACAGGAAACAACTCGGTAGTCTTCTTCTTCTTCTTCTTCTTATTATTATTATTGAGTTGGTTAGCTAATTTAATTGAATTTTTGAGGAAAAAAAACAGGGTC
TTATTTTGGATAAACAAAGTGAGAGATTAA
Protein sequenceShow/hide protein sequence
MNELPADCVGQILAFTSLKDVCRLAGVSSVFRSASDSNFVWKNFVPVNYKEIIIASSASSFCSFLNSLLKKPLYIGTGNNSVVFFFFFFLLLLLSWLANLIEFLRKKNRV
LFWINKVRD