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PI0021279 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021279
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:21532682..21533163
RNA-Seq ExpressionPI0021279
SyntenyPI0021279
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060401.1 hypothetical protein E6C27_scaffold22G002130 [Cucumis melo var. makuwa]4.9e-1860.82Show/hide
Query:  SPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEVKYTHEPLKIFE
        SPLDDHL+ L+EL SD+ LTG H VDSA EEVGTSKTP  K AEQS+   ALL EIRRGKM V  KD+E+ S+     PK  L++V  TH PLK  E
Subjt:  SPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEVKYTHEPLKIFE

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]9.8e-1957.01Show/hide
Query:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV
        K+R+QV+IP EE  SPL+DHL+ L+E  SD+ LTG H VDS  EEVGTSKTP  KPAEQS+   ALL EIRRGKM V  KD+E+ S+      K  L++V
Subjt:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV

Query:  KYTHEPL
           H PL
Subjt:  KYTHEPL

KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]6.4e-1856.6Show/hide
Query:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE
        +P   + SPL+DHL+ L+E  SD+ L G H VDSA EEVGTSKTP  KPAEQS+   ALL EIRRGKM V EKD+E+   LSK    PK  L++V   H 
Subjt:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE

Query:  PLKIFE
        PLK  E
Subjt:  PLKIFE

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]9.8e-1957.01Show/hide
Query:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV
        K+R+QV+IP EE  SPL+DHL+ L+E  SD+ LTG H VDS  EEVGTSKTP  KPAEQS+   ALL EIRRGKM V  KD+E+ S+      K  L++V
Subjt:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV

Query:  KYTHEPL
           H PL
Subjt:  KYTHEPL

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]6.4e-1856.6Show/hide
Query:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE
        +P   + SPL+DHL+ L+E  SD+ L G H VDSA EEVGTSKTP  KPAEQS+   ALL EIRRGKM V EKD+E+   LSK    PK  L++V   H 
Subjt:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE

Query:  PLKIFE
        PLK  E
Subjt:  PLKIFE

TrEMBL top hitse value%identityAlignment
A0A5A7V2J6 Uncharacterized protein3.1e-1856.6Show/hide
Query:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE
        +P   + SPL+DHL+ L+E  SD+ L G H VDSA EEVGTSKTP  KPAEQS+   ALL EIRRGKM V EKD+E+   LSK    PK  L++V   H 
Subjt:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE

Query:  PLKIFE
        PLK  E
Subjt:  PLKIFE

A0A5A7V4F4 PMD domain-containing protein4.7e-1957.01Show/hide
Query:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV
        K+R+QV+IP EE  SPL+DHL+ L+E  SD+ LTG H VDS  EEVGTSKTP  KPAEQS+   ALL EIRRGKM V  KD+E+ S+      K  L++V
Subjt:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV

Query:  KYTHEPL
           H PL
Subjt:  KYTHEPL

A0A5D3BRA8 PMD domain-containing protein4.7e-1957.01Show/hide
Query:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV
        K+R+QV+IP EE  SPL+DHL+ L+E  SD+ LTG H VDS  EEVGTSKTP  KPAEQS+   ALL EIRRGKM V  KD+E+ S+      K  L++V
Subjt:  KQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEV

Query:  KYTHEPL
           H PL
Subjt:  KYTHEPL

A0A5D3BW91 Uncharacterized protein3.1e-1856.6Show/hide
Query:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE
        +P   + SPL+DHL+ L+E  SD+ L G H VDSA EEVGTSKTP  KPAEQS+   ALL EIRRGKM V EKD+E+   LSK    PK  L++V   H 
Subjt:  IPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKS---PKELLEEVKYTHE

Query:  PLKIFE
        PLK  E
Subjt:  PLKIFE

A0A5D3DEN0 Uncharacterized protein2.4e-1860.82Show/hide
Query:  SPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEVKYTHEPLKIFE
        SPLDDHL+ L+EL SD+ LTG H VDSA EEVGTSKTP  K AEQS+   ALL EIRRGKM V  KD+E+ S+     PK  L++V  TH PLK  E
Subjt:  SPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIEN-SNHLSKSPKELLEEVKYTHEPLKIFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTGATAGCAGCAGAAGCAATCATCATTGGAAGAGACCTTCGAAGAAAGCAAAGGCATCAGGTGATGATTCCTGTGGAAGAGGCTCAATCACCTTTGGATGATCA
TCTTCAAGAACTTGTAGAGCTATGTAGTGATGACTTTCTGACAGGGTCTCATGTTGTGGATTCAGCCCTTGAAGAAGTTGGTACCTCAAAGACACCATTTGCCAAACCAG
CTGAACAATCCATATGTTCACCTGCTCTTCTCGGGGAGATTCGTCGAGGCAAGATGAAGGTGAATGAAAAAGACATTGAAAATTCAAATCATCTATCCAAAAGCCCCAAA
GAGCTTTTAGAGGAGGTCAAATACACACATGAGCCTCTCAAGATTTTCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGTGATAGCAGCAGAAGCAATCATCATTGGAAGAGACCTTCGAAGAAAGCAAAGGCATCAGGTGATGATTCCTGTGGAAGAGGCTCAATCACCTTTGGATGATCA
TCTTCAAGAACTTGTAGAGCTATGTAGTGATGACTTTCTGACAGGGTCTCATGTTGTGGATTCAGCCCTTGAAGAAGTTGGTACCTCAAAGACACCATTTGCCAAACCAG
CTGAACAATCCATATGTTCACCTGCTCTTCTCGGGGAGATTCGTCGAGGCAAGATGAAGGTGAATGAAAAAGACATTGAAAATTCAAATCATCTATCCAAAAGCCCCAAA
GAGCTTTTAGAGGAGGTCAAATACACACATGAGCCTCTCAAGATTTTCGAGTAG
Protein sequenceShow/hide protein sequence
MIVIAAEAIIIGRDLRRKQRHQVMIPVEEAQSPLDDHLQELVELCSDDFLTGSHVVDSALEEVGTSKTPFAKPAEQSICSPALLGEIRRGKMKVNEKDIENSNHLSKSPK
ELLEEVKYTHEPLKIFE