; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021297 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021297
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr09:5966218..5966382
RNA-Seq ExpressionPI0021297
SyntenyPI0021297
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]6.2e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
KAA0055483.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1474.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT V+DIHYIETSN WS+WRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-1474.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.1e-1474.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
TYK09570.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.1e-1474.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT V+DIHYIETSN WSQWRD+L + MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7UHS2 Retrotransposon protein6.7e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT V+DIHYIETSN WS+WRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5A7UIM7 Putative nuclease HARBI13.0e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5A7VJX3 Retrotransposon protein5.1e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5D3BL48 Putative nuclease HARBI15.1e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5D3CE09 Putative nuclease HARBI15.1e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT V+DIHYIETSN WSQWRD+L + MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGCTGACATACCGGACGAAGTTGATGAGGGTGACTCAACGTACGCCACCACTGGTGTGGAGGACATTCACTACATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCGAAAAGAATGTTTTGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGCTGACATACCGGACGAAGTTGATGAGGGTGACTCAACGTACGCCACCACTGGTGTGGAGGACATTCACTACATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCGAAAAGAATGTTTTGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNADIPDEVDEGDSTYATTGVEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ