; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021305 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021305
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionfasciclin-like arabinogalactan protein 6
Genome locationchr01:3644306..3648371
RNA-Seq ExpressionPI0021305
SyntenyPI0021305
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR000782 - FAS1 domain
IPR036378 - FAS1 domain superfamily
IPR045003 - Fasciclin-like arabinogalactan protein, group A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059126.1 fasciclin-like arabinogalactan protein 6 [Cucumis melo var. makuwa]1.7e-4462.8Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL
        LL  + ++      LNNSQG GLTILAPTDNGFNAL      +L   +++QLLLYHVLPKFYTL ELQT+SNPVRTQAGDWGLNFTGQANSNQVNV   +
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL

Query:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
            +            F      +    FGNHTAAPPPK+PAPGADKAPVDGETPPKSDAAKP
Subjt:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

XP_004144519.1 fasciclin-like arabinogalactan protein 13 [Cucumis sativus]1.5e-4363.41Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL
        LL  + ++      LNNSQGGGLTILAPTDNGFN+L      AL   +++QLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNV   +
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL

Query:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
          + +            F      +    FGNHTAA PPK+PAPG DKAPVDGETPPKSDAAKP
Subjt:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

XP_008455488.1 PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo]1.7e-4462.8Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL
        LL  + ++      LNNSQG GLTILAPTDNGFNAL      +L   +++QLLLYHVLPKFYTL ELQT+SNPVRTQAGDWGLNFTGQANSNQVNV   +
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL

Query:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
            +            F      +    FGNHTAAPPPK+PAPGADKAPVDGETPPKSDAAKP
Subjt:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

XP_022988922.1 fasciclin-like arabinogalactan protein 13 [Cucurbita maxima]1.6e-2953.42Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPALAISIVR----------
        N+   G+TILAPTDN FN+L       L    + QLLLYHVL KFYTL +LQTVSNPVRT AGDWGLNFTGQA  NQVNV   + +  V           
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPALAISIVR----------

Query:  -FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAA
         +      +    FG+H AAPPPK+  P ++K+P DGETPPKSDAA
Subjt:  -FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAA

XP_038887446.1 fasciclin-like arabinogalactan protein 13 [Benincasa hispida]2.3e-4160.98Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL
        LL  + ++      LNNSQG GLTILAPTDNGFNAL       L   +++QLLLYHVLPKFYTL ELQTVSNPVRTQAGDWGLNFTGQANSNQVNV   +
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL

Query:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
            +            F           FGNHTAAPPPK+ AP ADK+PVDGETPPKSDAA P
Subjt:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

TrEMBL top hitse value%identityAlignment
A0A0A0K1Z9 FAS1 domain-containing protein7.1e-4463.41Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL
        LL  + ++      LNNSQGGGLTILAPTDNGFN+L      AL   +++QLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNV   +
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL

Query:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
          + +            F      +    FGNHTAA PPK+PAPG DKAPVDGETPPKSDAAKP
Subjt:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

A0A1S3C1R5 fasciclin-like arabinogalactan protein 68.4e-4562.8Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL
        LL  + ++      LNNSQG GLTILAPTDNGFNAL      +L   +++QLLLYHVLPKFYTL ELQT+SNPVRTQAGDWGLNFTGQANSNQVNV   +
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL

Query:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
            +            F      +    FGNHTAAPPPK+PAPGADKAPVDGETPPKSDAAKP
Subjt:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

A0A5A7UY52 Fasciclin-like arabinogalactan protein 68.4e-4562.8Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL
        LL  + ++      LNNSQG GLTILAPTDNGFNAL      +L   +++QLLLYHVLPKFYTL ELQT+SNPVRTQAGDWGLNFTGQANSNQVNV   +
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPAL

Query:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
            +            F      +    FGNHTAAPPPK+PAPGADKAPVDGETPPKSDAAKP
Subjt:  AISIVR-----------FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

A0A6J1ES00 fasciclin-like arabinogalactan protein 137.6e-3053.42Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPALAISIVR----------
        N+   G+TILAPTDN FN+L       L    + QLLLYHVL KFYTL +LQTVSNPVRT AGDWGLNFTGQA  NQVNV   + +  V           
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPALAISIVR----------

Query:  -FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAA
         +      +    FG+H AAPPPK+  P ++K+P DGETPPKSDAA
Subjt:  -FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAA

A0A6J1JED4 fasciclin-like arabinogalactan protein 137.6e-3053.42Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPALAISIVR----------
        N+   G+TILAPTDN FN+L       L    + QLLLYHVL KFYTL +LQTVSNPVRT AGDWGLNFTGQA  NQVNV   + +  V           
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPALAISIVR----------

Query:  -FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAA
         +      +    FG+H AAPPPK+  P ++K+P DGETPPKSDAA
Subjt:  -FCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAA

SwissProt top hitse value%identityAlignment
Q8LEE9 Fasciclin-like arabinogalactan protein 121.2e-0837.62Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVN
        LL +  V       LNNS   G+TI AP+D+ F  L      +LT  ++ +L+ +HV+P + +    QT+SNP+RTQAGD     + LN T   + N VN
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVN

Query:  V
        +
Subjt:  V

Q8LEJ6 Fasciclin-like arabinogalactan protein 111.6e-1343.75Show/hide
Query:  LNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVNVPPALAISIV
        LN+S   GLT+ APTDN FN+L      +L+  ++ QL+ +HVLP   T+ + QTVSNP+RTQAGD     + LN T  ++ NQVN+   +  + V
Subjt:  LNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVNVPPALAISIV

Q9FFH6 Fasciclin-like arabinogalactan protein 133.3e-1440.65Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA------GDWGLNFTGQANSNQVNVPPA-----------
        NS   G+T+LAPTDN F  L       L+   + +L+LYHV PKFYTL +L +VSNPVRTQA      G +GLNFTGQ   NQVNV              
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA------GDWGLNFTGQANSNQVNVPPA-----------

Query:  ----LAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDA
            LA+ +V     P  +  G       APPPKS +P       D E+  K+ A
Subjt:  ----LAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDA

Q9SIL7 Fasciclin-like arabinogalactan protein 62.2e-1840.13Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVPPALAISIVRFCGRP
        NS   G+TI APTDN FN L      +LT  ++ QL+LYH++PK+Y+L +L   SNPVRTQA     G +GLNFTGQA SNQVNV   +  + +    R 
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVPPALAISIVRFCGRP

Query:  SF-----------VARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAK
         F           +    FG  T   P  +PAP +  +  D ++P   D  K
Subjt:  SF-----------VARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAK

Q9ZWA8 Fasciclin-like arabinogalactan protein 92.1e-1336.13Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQAN-------------SNQVNVPP
        NS   G+T+ APTDN F  L       L+   + +L+LYHV PK+Y++ +L +VSNPVRTQA     G +GLNFTGQ N             SN +    
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQAN-------------SNQVNVPP

Query:  ALAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
         LA+ +V     P  +    FG H  +  P +PAP +    V  ++     AA P
Subjt:  ALAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

Arabidopsis top hitse value%identityAlignment
AT1G03870.1 FASCICLIN-like arabinoogalactan 91.5e-1436.13Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQAN-------------SNQVNVPP
        NS   G+T+ APTDN F  L       L+   + +L+LYHV PK+Y++ +L +VSNPVRTQA     G +GLNFTGQ N             SN +    
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQAN-------------SNQVNVPP

Query:  ALAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP
         LA+ +V     P  +    FG H  +  P +PAP +    V  ++     AA P
Subjt:  ALAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKP

AT2G20520.1 FASCICLIN-like arabinogalactan 61.6e-1940.13Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVPPALAISIVRFCGRP
        NS   G+TI APTDN FN L      +LT  ++ QL+LYH++PK+Y+L +L   SNPVRTQA     G +GLNFTGQA SNQVNV   +  + +    R 
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA-----GDWGLNFTGQANSNQVNVPPALAISIVRFCGRP

Query:  SF-----------VARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAK
         F           +    FG  T   P  +PAP +  +  D ++P   D  K
Subjt:  SF-----------VARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAK

AT5G03170.1 FASCICLIN-like arabinogalactan-protein 111.2e-1443.75Show/hide
Query:  LNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVNVPPALAISIV
        LN+S   GLT+ APTDN FN+L      +L+  ++ QL+ +HVLP   T+ + QTVSNP+RTQAGD     + LN T  ++ NQVN+   +  + V
Subjt:  LNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVNVPPALAISIV

AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor2.4e-1540.65Show/hide
Query:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA------GDWGLNFTGQANSNQVNVPPA-----------
        NS   G+T+LAPTDN F  L       L+   + +L+LYHV PKFYTL +L +VSNPVRTQA      G +GLNFTGQ   NQVNV              
Subjt:  NSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQA------GDWGLNFTGQANSNQVNVPPA-----------

Query:  ----LAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDA
            LA+ +V     P  +  G       APPPKS +P       D E+  K+ A
Subjt:  ----LAISIVRFCGRPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDA

AT5G60490.1 FASCICLIN-like arabinogalactan-protein 128.7e-1037.62Show/hide
Query:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVN
        LL +  V       LNNS   G+TI AP+D+ F  L      +LT  ++ +L+ +HV+P + +    QT+SNP+RTQAGD     + LN T   + N VN
Subjt:  LLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGD-----WGLNFTGQANSNQVN

Query:  V
        +
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTAGGCAACGCCGCTGTGTTATGCGCTTTCTTGATATCGCTCAACAATTCTCAAGGAGGAGGATTGACCATTCTTGCTCCAACTGATAATGGCTTCAATGCCTT
ACACCTGGTGCCCTCAACAGCCTTGACGACCAGCAGAAGAGCCCAGCTCCTCCTTTACCACGTCTTGCCTAAGTTCTACACCTTGATAGAGCTGCAAACCGTCAGCAATC
CGGTGAGGACTCAGGCCGGAGATTGGGGGCTGAACTTCACCGGCCAAGCGAACTCGAACCAAGTCAACGTTCCACCGGCGTTAGCAATCTCCATTGTCCGTTTTTGTGGT
AGACCAAGTTTTGTTGCCCGAGGCTCTTTTGGCAACCACACTGCCGCACCACCTCCAAAAAGTCCGGCTCCAGGGGCCGATAAGGCACCTGTCGACGGAGAAACACCGCC
AAAATCTGATGCCGCAAAGCCACGGCTAATGATAAGAGTGCAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTAGGCAACGCCGCTGTGTTATGCGCTTTCTTGATATCGCTCAACAATTCTCAAGGAGGAGGATTGACCATTCTTGCTCCAACTGATAATGGCTTCAATGCCTT
ACACCTGGTGCCCTCAACAGCCTTGACGACCAGCAGAAGAGCCCAGCTCCTCCTTTACCACGTCTTGCCTAAGTTCTACACCTTGATAGAGCTGCAAACCGTCAGCAATC
CGGTGAGGACTCAGGCCGGAGATTGGGGGCTGAACTTCACCGGCCAAGCGAACTCGAACCAAGTCAACGTTCCACCGGCGTTAGCAATCTCCATTGTCCGTTTTTGTGGT
AGACCAAGTTTTGTTGCCCGAGGCTCTTTTGGCAACCACACTGCCGCACCACCTCCAAAAAGTCCGGCTCCAGGGGCCGATAAGGCACCTGTCGACGGAGAAACACCGCC
AAAATCTGATGCCGCAAAGCCACGGCTAATGATAAGAGTGCAGCTGTGA
Protein sequenceShow/hide protein sequence
MLLGNAAVLCAFLISLNNSQGGGLTILAPTDNGFNALHLVPSTALTTSRRAQLLLYHVLPKFYTLIELQTVSNPVRTQAGDWGLNFTGQANSNQVNVPPALAISIVRFCG
RPSFVARGSFGNHTAAPPPKSPAPGADKAPVDGETPPKSDAAKPRLMIRVQL