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PI0021323 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021323
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr04:19893234..19893479
RNA-Seq ExpressionPI0021323
SyntenyPI0021323
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025482.1 uncharacterized protein E6C27_scaffold417G00860 [Cucumis melo var. makuwa]2.7e-3082.72Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKPLC A DAKALENYIFDL+QYF+ATNT+TEEAKVTLA MHL EDAKLWWRS+Y +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

KAA0031722.1 uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]7.1e-3185.19Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKP C A DAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHL EDAKLWWRS++ +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

KAA0057286.1 uncharacterized protein E6C27_scaffold280G001270 [Cucumis melo var. makuwa]2.7e-3083.95Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKP C A DAKALENYIFDLEQYFRATNTVTEEAKVTLA MHL EDAKLWWRS++ +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

KAA0058115.1 uncharacterized protein E6C27_scaffold274G004240 [Cucumis melo var. makuwa]2.7e-3083.95Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKP C A DAKALENYIFDLEQYF+ATNTVTEEAKVTLA MHL EDAKLWWRS+Y +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

KAA0067252.1 uncharacterized protein E6C27_scaffold418G00690 [Cucumis melo var. makuwa]1.6e-3083.95Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKISEPKP C A DAK LENYIFDLEQYF+ATNTVTEEAKVTLA MHL EDAKLWWRS+Y +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

TrEMBL top hitse value%identityAlignment
A0A5A7SKW3 Retrotrans_gag domain-containing protein3.4e-3185.19Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKP C A DAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHL EDAKLWWRS++ +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

A0A5A7UT10 Retrotrans_gag domain-containing protein1.3e-3083.95Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKP C A DAKALENYIFDLEQYFRATNTVTEEAKVTLA MHL EDAKLWWRS++ +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

A0A5A7UWX6 Retrotrans_gag domain-containing protein1.3e-3083.95Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKP C A DAKALENYIFDLEQYF+ATNTVTEEAKVTLA MHL EDAKLWWRS+Y +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

A0A5A7VFV0 Retrotrans_gag domain-containing protein7.7e-3183.95Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKISEPKP C A DAK LENYIFDLEQYF+ATNTVTEEAKVTLA MHL EDAKLWWRS+Y +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

A0A5D3BKV0 Retrotrans_gag domain-containing protein1.3e-3082.72Show/hide
Query:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG
        MANQAP GGAI V+RVKI EPKPLC A DAKALENYIFDL+QYF+ATNT+TEEAKVTLA MHL EDAKLWWRS+Y +IQEG
Subjt:  MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCAAGCTCCAGTTGGAGGAGCGATCCAAGTTAACAGAGTGAAAATCTCCGAACCCAAACCCTTATGTAGGGCAATGGATGCAAAAGCCTTAGAGAACTACAT
CTTTGATCTCGAACAATACTTTCGGGCCACGAACACAGTCACAGAAGAAGCGAAAGTGACGTTAGCAATGATGCATCTAGTTGAGGATGCAAAGTTATGGTGGAGGTCCC
AATATGCCGAGATCCAAGAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACCAAGCTCCAGTTGGAGGAGCGATCCAAGTTAACAGAGTGAAAATCTCCGAACCCAAACCCTTATGTAGGGCAATGGATGCAAAAGCCTTAGAGAACTACAT
CTTTGATCTCGAACAATACTTTCGGGCCACGAACACAGTCACAGAAGAAGCGAAAGTGACGTTAGCAATGATGCATCTAGTTGAGGATGCAAAGTTATGGTGGAGGTCCC
AATATGCCGAGATCCAAGAAGGGTGA
Protein sequenceShow/hide protein sequence
MANQAPVGGAIQVNRVKISEPKPLCRAMDAKALENYIFDLEQYFRATNTVTEEAKVTLAMMHLVEDAKLWWRSQYAEIQEG