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PI0021325 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021325
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:2758465..2758887
RNA-Seq ExpressionPI0021325
SyntenyPI0021325
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]1.3e-5687.23Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKP-SSFNSSWKKEN
        M QK QALRQGNKSVEDYY EMDTL+DRLDLDE+MET+MA+FLNGLNKEI DKVDLQPY DIEEMLHLAIKVEKQ ST+ TRYNS KP SSFNSSWKKEN
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKP-SSFNSSWKKEN

Query:  KSEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC
        KS++RSRDKFV+GS KEKGESSMKGKSKFEESKERNRDIKC
Subjt:  KSEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC

XP_022152309.1 uncharacterized protein LOC111020057 [Momordica charantia]5.0e-4068.06Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK
        MAQKLQALRQGNKSVEDYYKE+DTLMDR+DLDEDM+ LMARFLN LNKEIADKVDLQPYFDIEEMLHLAIK+E+Q+  K  RY+S + S+ +++WKK++K
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK

Query:  SE----FRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC
        +         +     S  EKGESSMKGK K +E KER RDIKC
Subjt:  SE----FRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC

XP_022158803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 [Momordica charantia]6.7e-3766.9Show/hide
Query:  AQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK-
        AQKLQ LRQG+KSVEDYYKEMDTLM+RLDL+EDME LMARFLNGLNKEIADKVDLQPYF+IEEMLHLAIK+EKQL  +  RY++   S  +S+WK ++K 
Subjt:  AQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK-

Query:  --SEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC
          S+ R+R+ +      EKGESS KGK K   +  RNRDIKC
Subjt:  --SEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC

XP_023530046.1 uncharacterized protein LOC111792716 [Cucurbita pepo subsp. pepo]1.5e-3663.19Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK
        MAQKLQAL+QG KSVEDYYKEMDTLMDRLDLDEDME LMARFLNGLN EIADK DLQPY +IEE+LH+AIK+E+Q+  +  RY+S    +  S+WKK++K
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK

Query:  S-EFRSRDKFVNGSFK---EKGESSMKGKSKFEESKERNRDIKC
        + +++ R+  +N   +   EKGESS  GK K E+S  RNRD+KC
Subjt:  S-EFRSRDKFVNGSFK---EKGESSMKGKSKFEESKERNRDIKC

XP_038887118.1 uncharacterized protein K02A2.6-like [Benincasa hispida]1.0e-4579.85Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKP-SSFNSSWKKEN
        MAQ+LQALRQGNKSVEDYYKEMD LMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEK LSTKR RY SSKP SS NSSWK EN
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKP-SSFNSSWKKEN

Query:  KSEFRSRDKFVNGSFKEKGESSMKGKSKFEESKE
        +S+FRSRDKFV  + KEKG + +  ++   + KE
Subjt:  KSEFRSRDKFVNGSFKEKGESSMKGKSKFEESKE

TrEMBL top hitse value%identityAlignment
A0A5A7T993 Retrotrans_gag domain-containing protein6.3e-5787.23Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKP-SSFNSSWKKEN
        M QK QALRQGNKSVEDYY EMDTL+DRLDLDE+MET+MA+FLNGLNKEI DKVDLQPY DIEEMLHLAIKVEKQ ST+ TRYNS KP SSFNSSWKKEN
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKP-SSFNSSWKKEN

Query:  KSEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC
        KS++RSRDKFV+GS KEKGESSMKGKSKFEESKERNRDIKC
Subjt:  KSEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC

A0A6J1DFN2 uncharacterized protein LOC1110200572.4e-4068.06Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK
        MAQKLQALRQGNKSVEDYYKE+DTLMDR+DLDEDM+ LMARFLN LNKEIADKVDLQPYFDIEEMLHLAIK+E+Q+  K  RY+S + S+ +++WKK++K
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK

Query:  SE----FRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC
        +         +     S  EKGESSMKGK K +E KER RDIKC
Subjt:  SE----FRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC

A0A6J1DX46 LOW QUALITY PROTEIN: uncharacterized protein LOC1110252683.3e-3766.9Show/hide
Query:  AQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK-
        AQKLQ LRQG+KSVEDYYKEMDTLM+RLDL+EDME LMARFLNGLNKEIADKVDLQPYF+IEEMLHLAIK+EKQL  +  RY++   S  +S+WK ++K 
Subjt:  AQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK-

Query:  --SEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC
          S+ R+R+ +      EKGESS KGK K   +  RNRDIKC
Subjt:  --SEFRSRDKFVNGSFKEKGESSMKGKSKFEESKERNRDIKC

A0A6J1EVV9 uncharacterized protein LOC1114364639.5e-3763.19Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK
        MAQKLQAL+QG KSVEDYYKEMDTLMDRL+LDEDME LMARFLNGLN EIADK DLQPY +IEE+LH+AIK+E+Q+  +  RY+S    +  S+WKKE+K
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK

Query:  S-EFRSRDKFVNGSFK---EKGESSMKGKSKFEESKERNRDIKC
        + +++ R++ +N   +   EKGESS  GK K E+S  RNRD+KC
Subjt:  S-EFRSRDKFVNGSFK---EKGESSMKGKSKFEESKERNRDIKC

A0A6J1G2Q3 uncharacterized protein LOC1114502869.5e-3763.19Show/hide
Query:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK
        MAQKLQAL+QG KSVEDYYKEMDTLMDRL+LDEDME LMARFLNGLN EIADK DLQPY +IEE+LH+AIK+E+Q+  +  RY+S    +  S+WKK++K
Subjt:  MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENK

Query:  S-EFRSRDKFVNGSFK---EKGESSMKGKSKFEESKERNRDIKC
        S +++ R++ +N   +   EKGESS  GK K E+S  RNRD+KC
Subjt:  S-EFRSRDKFVNGSFK---EKGESSMKGKSKFEESKERNRDIKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAAAAACTTCAAGCATTGAGGCAAGGCAACAAGTCGGTGGAAGACTACTACAAAGAGATGGACACTTTGATGGATAGACTTGATCTTGATGAGGATATGGAGAC
TCTCATGGCACGGTTTTTGAATGGCCTTAACAAGGAGATTGCTGACAAGGTTGATTTGCAGCCATACTTTGACATAGAGGAAATGTTGCATCTTGCCATCAAAGTGGAAA
AACAATTGAGTACCAAAAGAACAAGGTACAATTCTTCTAAACCTTCTTCTTTCAACTCATCATGGAAAAAGGAGAATAAAAGTGAATTTAGAAGTAGAGACAAGTTTGTG
AATGGAAGTTTTAAAGAAAAAGGTGAGTCTTCTATGAAAGGAAAGTCCAAATTTGAAGAGTCTAAGGAGAGAAATAGAGATATTAAGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAAAAACTTCAAGCATTGAGGCAAGGCAACAAGTCGGTGGAAGACTACTACAAAGAGATGGACACTTTGATGGATAGACTTGATCTTGATGAGGATATGGAGAC
TCTCATGGCACGGTTTTTGAATGGCCTTAACAAGGAGATTGCTGACAAGGTTGATTTGCAGCCATACTTTGACATAGAGGAAATGTTGCATCTTGCCATCAAAGTGGAAA
AACAATTGAGTACCAAAAGAACAAGGTACAATTCTTCTAAACCTTCTTCTTTCAACTCATCATGGAAAAAGGAGAATAAAAGTGAATTTAGAAGTAGAGACAAGTTTGTG
AATGGAAGTTTTAAAGAAAAAGGTGAGTCTTCTATGAAAGGAAAGTCCAAATTTGAAGAGTCTAAGGAGAGAAATAGAGATATTAAGTGCTGA
Protein sequenceShow/hide protein sequence
MAQKLQALRQGNKSVEDYYKEMDTLMDRLDLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKQLSTKRTRYNSSKPSSFNSSWKKENKSEFRSRDKFV
NGSFKEKGESSMKGKSKFEESKERNRDIKC