; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0021354 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021354
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:10847644..10848535
RNA-Seq ExpressionPI0021354
SyntenyPI0021354
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031555.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-7554.89Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M +S+RAP++ WT EEE  LVECL+ELVS  GW+SDNGTFRPGYLAQL RMM +KLP   ++ +  IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +C
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        I+AE +LFDNWV+S    K  + +    YD+L+YVFGRDRA G  AETFADV SN P    D   + D  NED P +YSQ VD+S DD+  +R  R+SDG
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +   SGSKRKRG Q    +E I  A+D  N+QLR IA WP    A +  +  E  + L ++PEL S
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

KAA0032766.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-7554.51Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M +S+RAP++ WT EEE  LVECL+ELVS  GW+SDNGTFRPGYLAQL RMM +KLP   ++ +  IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +C
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        I+AE +LFDNWV+S    K  + +    YD+L+YVFGRDRA G  AETFADV SN P    D   + D  NED P +YSQ VD+S DD+  +R  R+S+G
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +   SGSKRKRG Q    +E I  A+D  N+QLR IA+WP    A +  +  E  + L ++PEL S
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

KAA0044610.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-7554.89Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M +S+RAP++ WT EEE  LVECL+ELVS  GW+SDNGTFRPGYLAQL RMM +KLP   ++ +  IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +C
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        I+AE +LFDNWV+S    K  + +    YD+L+YVFGRDRA G  AETFADV SN P    D   + D  NED P +YSQ VD+S DD+  +R  R+SDG
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +   SGSKRKRG Q    +E I  A+D  N+QLR IA+WP    A +  +  E  + L ++PEL S
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

TYJ96194.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-7554.89Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M +S+RAP++ WT EEE  LVECL+ELVS  GW+SDNGTFRPGYLAQL RMM +KLP   ++ +  IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +C
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        I+AE +LFDNWV+S    K  + +    YD+L+YVFGRDRA G  AETFADV SN P    D   + D  NED P +YSQ VD+S DD+  +R  R+SDG
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +   SGSKRKRG Q    +E I  A+D  N+QLR IA WP    A +  +  E  + L ++PEL S
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]2.5e-10471.43Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M S SRAPK+TWT EEE K VECLVELVSS GWRSDNGTF+PGYLAQLQRMM +KLP TNIQ S TIDC VKSLKKTY AI EMRGPSCSGFGWNEE+QC
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        IIAE DLFD+W+KS    K  + +    YDDLSYVFG+DRA GAR+ETF +V SNV N FND++PL D H+ED PTMYSQ V MSPD+M G RAG++S+ 
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +NC S SKRKRG +  ETVEVIR+ M+F N+QL+ IADWPKEKRA EVE+ A+VVKQL DIP+LRS
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859531.2e-10471.43Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M S SRAPK+TWT EEE K VECLVELVSS GWRSDNGTF+PGYLAQLQRMM +KLP TNIQ S TIDC VKSLKKTY AI EMRGPSCSGFGWNEE+QC
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        IIAE DLFD+W+KS    K  + +    YDDLSYVFG+DRA GAR+ETF +V SNV N FND++PL D H+ED PTMYSQ V MSPD+M G RAG++S+ 
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +NC S SKRKRG +  ETVEVIR+ M+F N+QL+ IADWPKEKRA EVE+ A+VVKQL DIP+LRS
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

A0A5A7TN44 Retrotransposon protein5.2e-7654.89Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M +S+RAP++ WT EEE  LVECL+ELVS  GW+SDNGTFRPGYLAQL RMM +KLP   ++ +  IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +C
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        I+AE +LFDNWV+S    K  + +    YD+L+YVFGRDRA G  AETFADV SN P    D   + D  NED P +YSQ VD+S DD+  +R  R+SDG
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +   SGSKRKRG Q    +E I  A+D  N+QLR IA+WP    A +  +  E  + L ++PEL S
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

A0A5A7U0H7 Retrotransposon protein1.2e-10471.43Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M S SRAPK+TWT EEE K VECLVELVSS GWRSDNGTF+PGYLAQLQRMM +KLP TNIQ S TIDC VKSLKKTY AI EMRGPSCSGFGWNEE+QC
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        IIAE DLFD+W+KS    K  + +    YDDLSYVFG+DRA GAR+ETF +V SNV N FND++PL D H+ED PTMYSQ V MSPD+M G RAG++S+ 
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +NC S SKRKRG +  ETVEVIR+ M+F N+QL+ IADWPKEKRA EVE+ A+VVKQL DIP+LRS
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

A0A5D3BCN9 Retrotransposon protein8.9e-7654.89Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M +S+RAP++ WT EEE  LVECL+ELVS  GW+SDNGTFRPGYLAQL RMM +KLP   ++ +  IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +C
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        I+AE +LFDNWV+S    K  + +    YD+L+YVFGRDRA G  AETFADV SN P    D   + D  NED P +YSQ VD+S DD+  +R  R+SDG
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +   SGSKRKRG Q    +E I  A+D  N+QLR IA WP    A +  +  E  + L ++PEL S
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

A0A5D3CWL2 Retrotransposon protein8.9e-7654.89Show/hide
Query:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC
        M +S+RAP++ WT EEE  LVECL+ELVS  GW+SDNGTFRPGYLAQL RMM +KLP   ++ +  IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +C
Subjt:  MESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQC

Query:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG
        I+AE +LFDNWV+S    K  + +    YD+L+YVFGRDRA G  AETFADV SN P    D   + D  NED P +YSQ VD+S DD+  +R  R+SDG
Subjt:  IIAEHDLFDNWVKSSWGEK-TVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDG

Query:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS
        +   SGSKRKRG Q    +E I  A+D  N+QLR IA WP    A +  +  E  + L ++PEL S
Subjt:  QNCLSGSKRKRGDQHSETVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGATAGAATGGAAAGTTCTTCACGAGCACCCAAATACACATGGACTAACGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTGGAATTGGTTTCATCTGACGGGTG
GAGGTCAGATAATGGGACATTTCGACCTGGGTATTTAGCACAGTTGCAACGGATGATGGTGAAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTC
GTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGTAGAAATGAGGGGGCCATCCTGTAGTGGGTTCGGGTGGAATGAAGAATATCAATGCATCATCGCGGAACACGAC
TTGTTTGATAATTGGGTCAAGTCATCCTGGGGCGAAAAGACTGTTACACAAATCATTTCCATATATGACGATTTGTCGTACGTGTTCGGCAGAGATCGGGCAATAGGAGC
ACGTGCGGAGACGTTTGCTGACGTGAGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTCCACTTGATGATCTACATAACGAAGACACCCCGACGATGTATAGCCAAA
GGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGGCAAAACTGTTTAAGTGGGAGTAAGAGGAAACGGGGTGACCAACATAGTGAA
ACAGTTGAGGTGATCAGGAATGCAATGGACTTTGCAAATGATCAATTGAGGGGAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACGGAGGTCGAATTGCATGCTGAAGT
CGTGAAACAACTGGATGATATCCCTGAACTACGAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGATAGAATGGAAAGTTCTTCACGAGCACCCAAATACACATGGACTAACGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTGGAATTGGTTTCATCTGACGGGTG
GAGGTCAGATAATGGGACATTTCGACCTGGGTATTTAGCACAGTTGCAACGGATGATGGTGAAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTC
GTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGTAGAAATGAGGGGGCCATCCTGTAGTGGGTTCGGGTGGAATGAAGAATATCAATGCATCATCGCGGAACACGAC
TTGTTTGATAATTGGGTCAAGTCATCCTGGGGCGAAAAGACTGTTACACAAATCATTTCCATATATGACGATTTGTCGTACGTGTTCGGCAGAGATCGGGCAATAGGAGC
ACGTGCGGAGACGTTTGCTGACGTGAGATCTAATGTGCCAAACAGTTTCAACGACAGTGTTCCACTTGATGATCTACATAACGAAGACACCCCGACGATGTATAGCCAAA
GGGTGGATATGTCCCCAGATGACATGGTAGGAACACGTGCAGGTCGGTCAAGTGATGGGCAAAACTGTTTAAGTGGGAGTAAGAGGAAACGGGGTGACCAACATAGTGAA
ACAGTTGAGGTGATCAGGAATGCAATGGACTTTGCAAATGATCAATTGAGGGGAATTGCGGATTGGCCAAAGGAGAAGCGTGCAACGGAGGTCGAATTGCATGCTGAAGT
CGTGAAACAACTGGATGATATCCCTGAACTACGAAGTTGA
Protein sequenceShow/hide protein sequence
MYDRMESSSRAPKYTWTNEEEAKLVECLVELVSSDGWRSDNGTFRPGYLAQLQRMMVKKLPDTNIQGSPTIDCRVKSLKKTYQAIVEMRGPSCSGFGWNEEYQCIIAEHD
LFDNWVKSSWGEKTVTQIISIYDDLSYVFGRDRAIGARAETFADVRSNVPNSFNDSVPLDDLHNEDTPTMYSQRVDMSPDDMVGTRAGRSSDGQNCLSGSKRKRGDQHSE
TVEVIRNAMDFANDQLRGIADWPKEKRATEVELHAEVVKQLDDIPELRS