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PI0021365 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0021365
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr04:17139812..17140527
RNA-Seq ExpressionPI0021365
SyntenyPI0021365
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]9.3e-1837.13Show/hide
Query:  VLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKK------------SMSIKE-FGWLRFFKGPTKMRLDAVKKFYNANY
        +++  K+ K+R  +D ELAEEL+ E++AMS          ++  RK  +N+K+++            + +I+E FGW +FFKG +K+RL+ V+KFY +++
Subjt:  VLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKK------------SMSIKE-FGWLRFFKGPTKMRLDAVKKFYNANY

Query:  HPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITSTG
        + +E+Y +++ K  YF++E IN+LY  P   ETP   L+  TLKRQ  E L+ I   G ++ IT TG
Subjt:  HPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITSTG

KAA0047756.1 hypothetical protein E6C27_scaffold1059G00170 [Cucumis melo var. makuwa]2.6e-1239.33Show/hide
Query:  KRREKLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSM-----------------------SIKEFGWL
        + RE+LHE L+V+ ILE KGK +    +EL E LE EIKA+S I EN      K LRKSTT+  KK ++                       +I +    
Subjt:  KRREKLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSM-----------------------SIKEFGWL

Query:  RFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELP
        +  K   ++ +D V+KFY+ +YH S FYT+VEGK +YF+ E I +LY+ P
Subjt:  RFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELP

KAA0049901.1 hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa]3.2e-1050.7Show/hide
Query:  TKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKIT
        TK+RLD VKKFY+A YHP++ Y  +E + IYF  E IN+LY+LP   E PG  ++    +  TKE LK IT
Subjt:  TKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKIT

KAA0050753.1 hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]3.3e-1535.96Show/hide
Query:  KLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSI-----------------KEFGWLRFFKGPTKMR
        K     E V  L  K      +D ELAEEL+ E++AMS ++ + R S KK  +K+    +K+K   +                  +    +  KG +K+R
Subjt:  KLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSI-----------------KEFGWLRFFKGPTKMR

Query:  LDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITST
        L  ++KFY ++ + +E+Y +++GK IYF+VE IN+LY+LP   +TP Q L+  TLKRQ +E LK I   GV+  IT T
Subjt:  LDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITST

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]6.9e-1339.85Show/hide
Query:  LEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSIKEFGWLRFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETP
        ++HE +  S +E ++   S    ++     K  K    KE       KG +K+RL  V+KFY ++ + +E+Y +++GK IYF+VE IN+LY+LP   ETP
Subjt:  LEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSIKEFGWLRFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETP

Query:  GQELLQNTLKRQTKETLKKITGCGVKWGITSTG
         Q L+  TLKRQ +E LK I   GV+  IT TG
Subjt:  GQELLQNTLKRQTKETLKKITGCGVKWGITSTG

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein4.5e-1837.13Show/hide
Query:  VLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKK------------SMSIKE-FGWLRFFKGPTKMRLDAVKKFYNANY
        +++  K+ K+R  +D ELAEEL+ E++AMS          ++  RK  +N+K+++            + +I+E FGW +FFKG +K+RL+ V+KFY +++
Subjt:  VLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKK------------SMSIKE-FGWLRFFKGPTKMRLDAVKKFYNANY

Query:  HPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITSTG
        + +E+Y +++ K  YF++E IN+LY  P   ETP   L+  TLKRQ  E L+ I   G ++ IT TG
Subjt:  HPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITSTG

A0A5A7U0J6 Uncharacterized protein1.3e-1239.33Show/hide
Query:  KRREKLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSM-----------------------SIKEFGWL
        + RE+LHE L+V+ ILE KGK +    +EL E LE EIKA+S I EN      K LRKSTT+  KK ++                       +I +    
Subjt:  KRREKLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSM-----------------------SIKEFGWL

Query:  RFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELP
        +  K   ++ +D V+KFY+ +YH S FYT+VEGK +YF+ E I +LY+ P
Subjt:  RFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELP

A0A5A7U4E3 Uncharacterized protein1.6e-1535.96Show/hide
Query:  KLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSI-----------------KEFGWLRFFKGPTKMR
        K     E V  L  K      +D ELAEEL+ E++AMS ++ + R S KK  +K+    +K+K   +                  +    +  KG +K+R
Subjt:  KLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSI-----------------KEFGWLRFFKGPTKMR

Query:  LDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITST
        L  ++KFY ++ + +E+Y +++GK IYF+VE IN+LY+LP   +TP Q L+  TLKRQ +E LK I   GV+  IT T
Subjt:  LDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITST

A0A5A7U8H4 Uncharacterized protein1.6e-1050.7Show/hide
Query:  TKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKIT
        TK+RLD VKKFY+A YHP++ Y  +E + IYF  E IN+LY+LP   E PG  ++    +  TKE LK IT
Subjt:  TKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKIT

A0A5A7URT6 Uncharacterized protein3.3e-1339.85Show/hide
Query:  LEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSIKEFGWLRFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETP
        ++HE +  S +E ++   S    ++     K  K    KE       KG +K+RL  V+KFY ++ + +E+Y +++GK IYF+VE IN+LY+LP   ETP
Subjt:  LEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSIKEFGWLRFFKGPTKMRLDAVKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETP

Query:  GQELLQNTLKRQTKETLKKITGCGVKWGITSTG
         Q L+  TLKRQ +E LK I   GV+  IT TG
Subjt:  GQELLQNTLKRQTKETLKKITGCGVKWGITSTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATAAAGCATTAGGCGTCAAGGTAGAAATGGAGCAGAAACACAAGTTCCATAAGAAGAGGAGGGAAAAGCTTCATGAGGCGCTAGAGGTTGTGTTAATCCTAGA
AAAAAAGGGGAAGGTGAGGTTGGATCAAGACGATGAACTGGCGGAGGAGCTCGAGCATGAGATCAAGGCGATGAGCCCGATTGAAGAGAACTCCAGGCGGTCGTCCAAGA
AAATTTTGAGAAAAAGTACCACTAACCTGAAGAAGAAGAAGAGCATGTCTATCAAGGAATTTGGGTGGTTGAGGTTTTTCAAGGGGCCGACAAAAATGCGGTTAGATGCC
GTGAAGAAGTTCTACAATGCAAATTACCATCCATCTGAGTTTTATACGCTAGTGGAAGGCAAACACATATACTTCGACGTTGAGGTCATTAATGAACTATACGAATTACC
TACGAGAGAAGAGACACCAGGGCAAGAGCTACTTCAAAACACCCTTAAGAGACAGACAAAGGAAACGTTGAAGAAAATCACAGGGTGTGGGGTGAAATGGGGCATTACAT
CCACCGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGATAAAGCATTAGGCGTCAAGGTAGAAATGGAGCAGAAACACAAGTTCCATAAGAAGAGGAGGGAAAAGCTTCATGAGGCGCTAGAGGTTGTGTTAATCCTAGA
AAAAAAGGGGAAGGTGAGGTTGGATCAAGACGATGAACTGGCGGAGGAGCTCGAGCATGAGATCAAGGCGATGAGCCCGATTGAAGAGAACTCCAGGCGGTCGTCCAAGA
AAATTTTGAGAAAAAGTACCACTAACCTGAAGAAGAAGAAGAGCATGTCTATCAAGGAATTTGGGTGGTTGAGGTTTTTCAAGGGGCCGACAAAAATGCGGTTAGATGCC
GTGAAGAAGTTCTACAATGCAAATTACCATCCATCTGAGTTTTATACGCTAGTGGAAGGCAAACACATATACTTCGACGTTGAGGTCATTAATGAACTATACGAATTACC
TACGAGAGAAGAGACACCAGGGCAAGAGCTACTTCAAAACACCCTTAAGAGACAGACAAAGGAAACGTTGAAGAAAATCACAGGGTGTGGGGTGAAATGGGGCATTACAT
CCACCGGGTAG
Protein sequenceShow/hide protein sequence
MKDKALGVKVEMEQKHKFHKKRREKLHEALEVVLILEKKGKVRLDQDDELAEELEHEIKAMSPIEENSRRSSKKILRKSTTNLKKKKSMSIKEFGWLRFFKGPTKMRLDA
VKKFYNANYHPSEFYTLVEGKHIYFDVEVINELYELPTREETPGQELLQNTLKRQTKETLKKITGCGVKWGITSTG